Lus10027897.g (Linum usitatissimum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Lus10027897.g T072083_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ABF3
M01782_2.00 		Arabidopsis thaliana
ACACGTGT
ACACGTGT		 PBM
Weirauch et al.(2014)
pTH7240 		0.815 0.667
ABF3
M09912_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF3_Q2 		0.815 0.667
PK18009.1
M01158_2.00 		Cannabis sativa
NNACACGTGN
NCACGTGTNN		 PBM
Lambert et al.(2019)
pTH10272 		0.809 0.807
ABF4
M01056_2.00 		Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7315 		0.806 0.772
ABF4
M01057_2.00 		Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN		 PBM
Sullivan et al.(2014)
pTH7551 		0.806 0.772
ABF4
M09911_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF4_Q2 		0.806 0.772
ABF2
M01771_2.00 		Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN		 PBM
Weirauch et al.(2014)
pTH8103 		0.803 0.877
ABF2
M06755_2.00 		Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN		 Dap-seq
OMalley et al.(2016)
ABF2_col_v3a 		0.803 0.877
OS08G0471950
M10047_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TRAB1_Q2 		0.802 0.737
ABF1
M01772_2.00 		Arabidopsis thaliana
NNMCACGTGNN
NNCACGTGKNN		 PBM
Weirauch et al.(2014)
pTH8837 		0.800 0.719
ABF1
M01773_2.00 		Arabidopsis thaliana
NMCACGTGKN
NMCACGTGKN		 PBM
Weirauch et al.(2014)
pTH8853 		0.800 0.719
ABF1
M02656_2.00 		Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC
GRHCACGTGGCVVVVVVVV		 SELEX
Mathelier et al.(2014)
MA0570.1 		0.800 0.719
ABF1
M09906_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_01 		0.800 0.719
ABF1
M09907_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_02 		0.800 0.719
ABF1
M09908_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_03 		0.800 0.719
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10027897 bZIP 322 378

Links

Other bZIP family TFs
Other Linum usitatissimum TFs

188 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10002399.g Linum usitatissimum Lus10002399.g I 0.823
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I 0.821
LPERR09G09170 Leersia perrieri LPERR09G09170 I 0.821
Pavir.Ba02029 Panicum virgatum Pavir.Ba02029 I 0.821
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I 0.821
POPTR_0009s10400 Populus trichocarpa POPTR_0009s10400 I 0.821
evm.TU.supercontig_62.4 Carica papaya evm.TU.supercontig_62.4 I 0.821
TRIUR3_26781 Triticum urartu TRIUR3_26781 I 0.821
Si030114m.g Setaria italica Si030114m.g I 0.821
MLOC_66546 Hordeum vulgare MLOC_66546 I 0.820
Ciclev10028435m.g Citrus clementina Ciclev10028435m.g I 0.819
orange1.1g013197m.g Citrus sinensis orange1.1g013197m.g I 0.819
Pavir.Fa00674 Panicum virgatum Pavir.Fa00674 I 0.819
GLYMA07G33600 Glycine max GLYMA07G33600 I 0.819
Eucgr.G01436 Eucalyptus grandis Eucgr.G01436 I 0.818
Pavir.Fb01750 Panicum virgatum Pavir.Fb01750 I 0.818
Si013904m.g Setaria italica Si013904m.g I 0.818
GSMUA_Achr9G27130_001 Musa acuminata GSMUA_Achr9G27130_001 I 0.818
PGSC0003DMG400025889 Solanum tuberosum PGSC0003DMG400025889 I 0.816
cassava42743.valid.m1 Manihot esculenta cassava42743.valid.m1 I 0.816
cassava42744.valid.m1 Manihot esculenta cassava42744.valid.m1 I 0.816
OGLUM09G13130 Oryza glumaepatula OGLUM09G13130 I 0.816
ORGLA09G0097200 Oryza glaberrima ORGLA09G0097200 I 0.816
OS09G0456200 Oryza sativa OS09G0456200 I 0.816
OPUNC09G11090 Oryza punctata OPUNC09G11090 I 0.816
OMERI09G10130 Oryza meridionalis OMERI09G10130 I 0.816
Solyc01g108080.2 Solanum lycopersicum Solyc01g108080.2 I 0.816
cassava42745.valid.m1 Manihot esculenta cassava42745.valid.m1 I 0.816
OB09G19140 Oryza brachyantha OB09G19140 I 0.816
gene28250-v1.0-hybrid Fragaria vesca gene28250-v1.0-hybrid I 0.816
BGIOSGA030899 Oryza indica BGIOSGA030899 I 0.816
Carubv10006251m.g Capsella rubella Carubv10006251m.g I 0.815
Cagra.1305s0026 Capsella grandiflora Cagra.1305s0026 I 0.815
ABF3 Arabidopsis thaliana AT4G34000 D 0.815
Bostr.7867s1253 Boechera stricta Bostr.7867s1253 I 0.815
Lus10014066.g Linum usitatissimum Lus10014066.g I 0.815
PGSC0003DMG400006211 Solanum tuberosum PGSC0003DMG400006211 I 0.815
ABF3 Arabidopsis lyrata fgenesh2_kg.7__705__AT4G34000.1 I 0.815
Gorai.008G024700 Gossypium raimondii Gorai.008G024700 I 0.814
Cucsa.219780 Cucumis sativus Cucsa.219780 I 0.814
MDP0000248567 Malus domestica MDP0000248567 I 0.814
Gorai.013G044500 Gossypium raimondii Gorai.013G044500 I 0.814
Pm021430 Prunus mume Pm021430 I 0.814
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I 0.814
PRUPE_ppa006752mg Prunus persica PRUPE_ppa006752mg I 0.814
mgf002047m Mimulus guttatus mgf002047m I 0.814
TCM_007074 Theobroma cacao TCM_007074 I 0.814
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I 0.814
mgf014602m Mimulus guttatus mgf014602m I 0.814
Cla016272 Citrullus lanatus Cla016272 I 0.814
mgf007524m Mimulus guttatus mgf007524m I 0.814
MTR_4g085910 Medicago truncatula MTR_4g085910 I 0.813
Ca_06458 Cicer arietinum Ca_06458 I 0.813
Solyc11g044560.1 Solanum lycopersicum Solyc11g044560.1 I 0.812
PGSC0003DMG400022931 Solanum tuberosum PGSC0003DMG400022931 I 0.812
Thhalv10020772m.g Eutrema salsugineum Thhalv10020772m.g I 0.811
Bo3g073080 Brassica oleracea Bo3g073080 I 0.811
GSMUA_Achr5G05690_001 Musa acuminata GSMUA_Achr5G05690_001 I 0.811
Bo5g115300 Brassica oleracea Bo5g115300 I 0.811
Bo1g114840 Brassica oleracea Bo1g114840 I 0.811
Bra022409 Brassica rapa Bra022409 I 0.811
Bra037533 Brassica rapa Bra037533 I 0.811
Bo7g116570 Brassica oleracea Bo7g116570 I 0.810
Thhalv10025203m.g Eutrema salsugineum Thhalv10025203m.g I 0.810
29801.m003176 Ricinus communis 29801.m003176 I 0.810
Cagra.2481s0016 Capsella grandiflora Cagra.2481s0016 I 0.809
Bo6g018480 Brassica oleracea Bo6g018480 I 0.809
PK18009.1 Cannabis sativa PK18009.1 D 0.809
Cagra.4978s0002 Capsella grandiflora Cagra.4978s0002 I 0.806
Carubv10009399m.g Capsella rubella Carubv10009399m.g I 0.806
ABF4 Arabidopsis lyrata fgenesh2_kg.3__2145__AT3G19290.1 I 0.806
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I 0.806
ABF4 Arabidopsis thaliana AT3G19290 D 0.806
Carubv10013729m.g Capsella rubella Carubv10013729m.g I 0.806
VIT_03s0063g00310 Vitis vinifera VIT_03s0063g00310 I 0.805
BRADI4G32090 Brachypodium distachyon BRADI4G32090 I 0.805
Bra018800 Brassica rapa Bra018800 I 0.805
ORUFI08G19970 Oryza rufipogon ORUFI08G19970 I 0.804
Bostr.26675s0197 Boechera stricta Bostr.26675s0197 I 0.804
OPUNC08G15700 Oryza punctata OPUNC08G15700 I 0.804
GSMUA_Achr6G04270_001 Musa acuminata GSMUA_Achr6G04270_001 I 0.804
ORGLA08G0211300 Oryza glaberrima ORGLA08G0211300 I 0.804
GRMZM2G157722 Zea mays GRMZM2G157722 I 0.804
Sb07g022965 Sorghum bicolor Sb07g022965 I 0.804
OB08G24950 Oryza brachyantha OB08G24950 I 0.804
BGIOSGA028831 Oryza indica BGIOSGA028831 I 0.804
GRMZM2G478417 Zea mays GRMZM2G478417 I 0.804
ABF2 Vitis vinifera VIT_18s0001g10450 I 0.804
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I 0.804
LPERR08G14740 Leersia perrieri LPERR08G14740 I 0.804
Cucsa.396070 Cucumis sativus Cucsa.396070 I 0.803
Pm005288 Prunus mume Pm005288 I 0.803
cassava12275.valid.m1 Manihot esculenta cassava12275.valid.m1 I 0.803
30170.m013868 Ricinus communis 30170.m013868 I 0.803
ABF2 Arabidopsis thaliana AT1G45249 D 0.803
PK02169.1 Cannabis sativa PK02169.1 I 0.803
cassava42669.valid.m1 Manihot esculenta cassava42669.valid.m1 I 0.803
Cla022926 Citrullus lanatus Cla022926 I 0.803
POPTR_0002s12710 Populus trichocarpa POPTR_0002s12710 I 0.803
Bo6g006970 Brassica oleracea Bo6g006970 I 0.803
mgf020824m Mimulus guttatus mgf020824m I 0.803
MDP0000701734 Malus domestica MDP0000701734 I 0.803
Bra040260 Brassica rapa Bra040260 I 0.803
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I 0.803
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I 0.803
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I 0.803
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I 0.803
SapurV1A.0878s0160 Salix purpurea SapurV1A.0878s0160 I 0.803
POPTR_0014s02810 Populus trichocarpa POPTR_0014s02810 I 0.803
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I 0.803
Carubv10009177m.g Capsella rubella Carubv10009177m.g I 0.803
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I 0.802
OS08G0471950 Oryza sativa OS08G0471950 D 0.802
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I 0.801
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I 0.801
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I 0.801
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I 0.801
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I 0.801
Solyc04g078840.2 Solanum lycopersicum Solyc04g078840.2 I 0.801
GSMUA_Achr3G07000_001 Musa acuminata GSMUA_Achr3G07000_001 I 0.801
GLYMA06G04353 Glycine max GLYMA06G04353 I 0.801
TCM_033824 Theobroma cacao TCM_033824 I 0.801
OBART08G17810 Oryza barthii OBART08G17810 I 0.801
OLONG_000475 Oryza longistaminata OLONG_000475 I 0.801
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I 0.801
ONIVA08G19830 Oryza nivara ONIVA08G19830 I 0.801
ABF1 Arabidopsis lyrata fgenesh2_kg.1__4055__AT1G49720.1 I 0.801
GLYMA04G04170 Glycine max GLYMA04G04170 I 0.801
Ca_01548 Cicer arietinum Ca_01548 I 0.801
MDP0000296303 Malus domestica MDP0000296303 I 0.800
Thhalv10012271m.g Eutrema salsugineum Thhalv10012271m.g I 0.800
Bra011485 Brassica rapa Bra011485 I 0.800
ABF1 Arabidopsis thaliana AT1G49720 D 0.800
Sb06g026410 Sorghum bicolor Sb06g026410 I 0.800
Bo1g007700 Brassica oleracea Bo1g007700 I 0.800
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I 0.800
GSMUA_Achr5G24570_001 Musa acuminata GSMUA_Achr5G24570_001 I 0.800
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I 0.799
MTR_3g101780 Medicago truncatula MTR_3g101780 I 0.799
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I 0.799
Solyc10g050210.1 Solanum lycopersicum Solyc10g050210.1 I 0.799
OLONG_001053 Oryza longistaminata OLONG_001053 I 0.797
OGLUM02G34210 Oryza glumaepatula OGLUM02G34210 I 0.796
BGIOSGA005551 Oryza indica BGIOSGA005551 I 0.796
OMERI02G32150 Oryza meridionalis OMERI02G32150 I 0.796
Aquca_007_00660 Aquilegia coerulea Aquca_007_00660 I 0.796
OBART02G33770 Oryza barthii OBART02G33770 I 0.796
OB02G40680 Oryza brachyantha OB02G40680 I 0.796
Pavir.J00256 Panicum virgatum Pavir.J00256 I 0.796
ONIVA02G33490 Oryza nivara ONIVA02G33490 I 0.796
GRMZM2G002075 Zea mays GRMZM2G002075 I 0.796
ORUFI02G35260 Oryza rufipogon ORUFI02G35260 I 0.796
BZIP23 Oryza sativa OS02G0766700 I 0.796
ORGLA02G0292000 Oryza glaberrima ORGLA02G0292000 I 0.796
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I 0.795
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I 0.795
Sb08g003760 Sorghum bicolor Sb08g003760 I 0.794
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I 0.792
mgf002176m Mimulus guttatus mgf002176m I 0.791
Lus10022720.g Linum usitatissimum Lus10022720.g I 0.790
Sb04g034190 Sorghum bicolor Sb04g034190 I 0.790
Si017618m.g Setaria italica Si017618m.g I 0.790
GLYMA10G08370 Glycine max GLYMA10G08370 I 0.790
ABI5 Populus trichocarpa POPTR_0006s08300 I 0.790
cassava11518.m1 Manihot esculenta cassava11518.m1 I 0.790
GLYMA13G22061 Glycine max GLYMA13G22061 I 0.790
cassava32856.m1 Manihot esculenta cassava32856.m1 I 0.790
Lus10014194.g Linum usitatissimum Lus10014194.g I 0.790
ABI5 Arabidopsis thaliana AT2G36270 D 0.790
29625.m000702 Ricinus communis 29625.m000702 I 0.789
Lus10021369.g Linum usitatissimum Lus10021369.g I 0.789
Eucgr.I01145 Eucalyptus grandis Eucgr.I01145 I 0.789
Lus10017049.g Linum usitatissimum Lus10017049.g I 0.789
Lus10009755.g Linum usitatissimum Lus10009755.g I 0.788
Bostr.12302s0127 Boechera stricta Bostr.12302s0127 I 0.788
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I 0.785
LPERR02G27610 Leersia perrieri LPERR02G27610 I 0.785
SELMODRAFT_443424 Selaginella moellendorffii SELMODRAFT_443424 I 0.784
Cucsa.385090 Cucumis sativus Cucsa.385090 I 0.784
Cucsa.241090 Cucumis sativus Cucsa.241090 I 0.783
Gorai.006G155600 Gossypium raimondii Gorai.006G155600 I 0.783
PGSC0003DMG400002660 Solanum tuberosum PGSC0003DMG400002660 I 0.783
mgf015092m Mimulus guttatus mgf015092m I 0.783
Solyc09g009490.2 Solanum lycopersicum Solyc09g009490.2 I 0.783
DPBF2 Vitis vinifera VIT_06s0080g00340 I 0.783
SapurV1A.0001s2050 Salix purpurea SapurV1A.0001s2050 I 0.782
Aquca_072_00142 Aquilegia coerulea Aquca_072_00142 I 0.782
SELMODRAFT_266892 Selaginella moellendorffii SELMODRAFT_266892 I 0.782