cassava42743.valid.m1 (Manihot esculenta)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 cassava42743.valid.m1 T070624_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK18009.1
M01158_2.00 		Cannabis sativa
NNACACGTGN
NCACGTGTNN		 PBM
Lambert et al.(2019)
pTH10272 		0.829 0.850
ABF4
M01056_2.00 		Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7315 		0.823 0.783
ABF4
M01057_2.00 		Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN		 PBM
Sullivan et al.(2014)
pTH7551 		0.823 0.783
ABF4
M09911_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF4_Q2 		0.823 0.783
ABF3
M01782_2.00 		Arabidopsis thaliana
ACACGTGT
ACACGTGT		 PBM
Weirauch et al.(2014)
pTH7240 		0.816 0.617
ABF3
M09912_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF3_Q2 		0.816 0.617
ABF1
M01772_2.00 		Arabidopsis thaliana
NNMCACGTGNN
NNCACGTGKNN		 PBM
Weirauch et al.(2014)
pTH8837 		0.811 0.667
ABF1
M01773_2.00 		Arabidopsis thaliana
NMCACGTGKN
NMCACGTGKN		 PBM
Weirauch et al.(2014)
pTH8853 		0.811 0.667
ABF1
M02656_2.00 		Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC
GRHCACGTGGCVVVVVVVV		 SELEX
Mathelier et al.(2014)
MA0570.1 		0.811 0.667
ABF1
M09906_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_01 		0.811 0.667
ABF1
M09907_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_02 		0.811 0.667
ABF1
M09908_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_03 		0.811 0.667
ABF2
M01771_2.00 		Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN		 PBM
Weirauch et al.(2014)
pTH8103 		0.801 0.817
ABF2
M06755_2.00 		Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN		 Dap-seq
OMalley et al.(2016)
ABF2_col_v3a 		0.801 0.817
OS08G0471950
M10047_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TRAB1_Q2 		0.799 0.667
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava42743.valid.m1 bZIP 416 475

Links

Other bZIP family TFs
Other Manihot esculenta TFs

205 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava42745.valid.m1 Manihot esculenta cassava42745.valid.m1 I 0.867
cassava42744.valid.m1 Manihot esculenta cassava42744.valid.m1 I 0.867
POPTR_0009s10400 Populus trichocarpa POPTR_0009s10400 I 0.861
Lus10014066.g Linum usitatissimum Lus10014066.g I 0.858
OB08G24950 Oryza brachyantha OB08G24950 I 0.848
mgf020824m Mimulus guttatus mgf020824m I 0.843
LPERR08G14740 Leersia perrieri LPERR08G14740 I 0.839
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I 0.833
Pavir.Ba02029 Panicum virgatum Pavir.Ba02029 I 0.833
ORUFI08G19970 Oryza rufipogon ORUFI08G19970 I 0.833
Si030114m.g Setaria italica Si030114m.g I 0.833
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I 0.833
ORGLA08G0211300 Oryza glaberrima ORGLA08G0211300 I 0.833
OPUNC08G15700 Oryza punctata OPUNC08G15700 I 0.833
BGIOSGA028831 Oryza indica BGIOSGA028831 I 0.833
Si013904m.g Setaria italica Si013904m.g I 0.832
mgf007524m Mimulus guttatus mgf007524m I 0.830
mgf014602m Mimulus guttatus mgf014602m I 0.830
MDP0000248567 Malus domestica MDP0000248567 I 0.830
Pavir.Fa00674 Panicum virgatum Pavir.Fa00674 I 0.830
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I 0.830
TCM_007074 Theobroma cacao TCM_007074 I 0.830
mgf002047m Mimulus guttatus mgf002047m I 0.830
Gorai.013G044500 Gossypium raimondii Gorai.013G044500 I 0.830
PK18009.1 Cannabis sativa PK18009.1 D 0.829
Bo3g073080 Brassica oleracea Bo3g073080 I 0.828
Thhalv10020772m.g Eutrema salsugineum Thhalv10020772m.g I 0.828
gene28250-v1.0-hybrid Fragaria vesca gene28250-v1.0-hybrid I 0.828
Bo5g115300 Brassica oleracea Bo5g115300 I 0.828
LPERR09G09170 Leersia perrieri LPERR09G09170 I 0.828
Bra022409 Brassica rapa Bra022409 I 0.828
PRUPE_ppa006752mg Prunus persica PRUPE_ppa006752mg I 0.828
Pm021430 Prunus mume Pm021430 I 0.828
Bra037533 Brassica rapa Bra037533 I 0.828
PGSC0003DMG400006211 Solanum tuberosum PGSC0003DMG400006211 I 0.826
Pavir.Fb01750 Panicum virgatum Pavir.Fb01750 I 0.825
evm.TU.supercontig_62.4 Carica papaya evm.TU.supercontig_62.4 I 0.824
Carubv10013729m.g Capsella rubella Carubv10013729m.g I 0.823
OGLUM09G13130 Oryza glumaepatula OGLUM09G13130 I 0.823
BGIOSGA030899 Oryza indica BGIOSGA030899 I 0.823
Cla016272 Citrullus lanatus Cla016272 I 0.823
OPUNC09G11090 Oryza punctata OPUNC09G11090 I 0.823
ORGLA09G0097200 Oryza glaberrima ORGLA09G0097200 I 0.823
OS09G0456200 Oryza sativa OS09G0456200 I 0.823
OMERI09G10130 Oryza meridionalis OMERI09G10130 I 0.823
ABF4 Arabidopsis lyrata fgenesh2_kg.3__2145__AT3G19290.1 I 0.823
ABF4 Arabidopsis thaliana AT3G19290 D 0.823
Cucsa.219780 Cucumis sativus Cucsa.219780 I 0.823
Cagra.4978s0002 Capsella grandiflora Cagra.4978s0002 I 0.823
Gorai.008G024700 Gossypium raimondii Gorai.008G024700 I 0.821
Solyc01g108080.2 Solanum lycopersicum Solyc01g108080.2 I 0.819
PGSC0003DMG400025889 Solanum tuberosum PGSC0003DMG400025889 I 0.819
Cagra.2481s0016 Capsella grandiflora Cagra.2481s0016 I 0.819
GSMUA_Achr9G27130_001 Musa acuminata GSMUA_Achr9G27130_001 I 0.818
Ciclev10028435m.g Citrus clementina Ciclev10028435m.g I 0.818
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I 0.818
orange1.1g013197m.g Citrus sinensis orange1.1g013197m.g I 0.818
GSMUA_Achr3G07000_001 Musa acuminata GSMUA_Achr3G07000_001 I 0.817
Lus10027897.g Linum usitatissimum Lus10027897.g I 0.816
Carubv10006251m.g Capsella rubella Carubv10006251m.g I 0.816
ABF3 Arabidopsis lyrata fgenesh2_kg.7__705__AT4G34000.1 I 0.816
Cagra.1305s0026 Capsella grandiflora Cagra.1305s0026 I 0.816
Bostr.7867s1253 Boechera stricta Bostr.7867s1253 I 0.816
ABF3 Arabidopsis thaliana AT4G34000 D 0.816
GSMUA_Achr5G05690_001 Musa acuminata GSMUA_Achr5G05690_001 I 0.816
ABF2 Vitis vinifera VIT_18s0001g10450 I 0.815
MTR_3g101780 Medicago truncatula MTR_3g101780 I 0.815
MLOC_66546 Hordeum vulgare MLOC_66546 I 0.815
OBART02G33770 Oryza barthii OBART02G33770 I 0.815
OB09G19140 Oryza brachyantha OB09G19140 I 0.815
ORGLA02G0292000 Oryza glaberrima ORGLA02G0292000 I 0.815
Sb07g022965 Sorghum bicolor Sb07g022965 I 0.815
Solyc11g044560.1 Solanum lycopersicum Solyc11g044560.1 I 0.814
PGSC0003DMG400022931 Solanum tuberosum PGSC0003DMG400022931 I 0.814
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I 0.814
cassava32856.m1 Manihot esculenta cassava32856.m1 I 0.814
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I 0.814
PK02169.1 Cannabis sativa PK02169.1 I 0.814
Lus10002399.g Linum usitatissimum Lus10002399.g I 0.814
GLYMA06G04353 Glycine max GLYMA06G04353 I 0.813
Ca_01548 Cicer arietinum Ca_01548 I 0.813
GLYMA04G04170 Glycine max GLYMA04G04170 I 0.813
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I 0.812
TCM_033824 Theobroma cacao TCM_033824 I 0.812
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I 0.812
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I 0.812
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I 0.812
ABF1 Arabidopsis lyrata fgenesh2_kg.1__4055__AT1G49720.1 I 0.811
Thhalv10012271m.g Eutrema salsugineum Thhalv10012271m.g I 0.811
Thhalv10025203m.g Eutrema salsugineum Thhalv10025203m.g I 0.811
POPTR_0014s02810 Populus trichocarpa POPTR_0014s02810 I 0.811
Solyc10g050210.1 Solanum lycopersicum Solyc10g050210.1 I 0.811
cassava42669.valid.m1 Manihot esculenta cassava42669.valid.m1 I 0.811
30170.m013868 Ricinus communis 30170.m013868 I 0.811
29801.m003176 Ricinus communis 29801.m003176 I 0.811
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I 0.811
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I 0.811
cassava12275.valid.m1 Manihot esculenta cassava12275.valid.m1 I 0.811
SapurV1A.0878s0160 Salix purpurea SapurV1A.0878s0160 I 0.811
ABF1 Arabidopsis thaliana AT1G49720 D 0.811
POPTR_0002s12710 Populus trichocarpa POPTR_0002s12710 I 0.811
ORUFI02G35260 Oryza rufipogon ORUFI02G35260 I 0.810
OGLUM02G34210 Oryza glumaepatula OGLUM02G34210 I 0.810
OMERI02G32150 Oryza meridionalis OMERI02G32150 I 0.810
BZIP23 Oryza sativa OS02G0766700 I 0.810
BGIOSGA005551 Oryza indica BGIOSGA005551 I 0.810
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I 0.810
ONIVA02G33490 Oryza nivara ONIVA02G33490 I 0.810
Cucsa.241090 Cucumis sativus Cucsa.241090 I 0.807
Cucsa.396070 Cucumis sativus Cucsa.396070 I 0.806
Cla022926 Citrullus lanatus Cla022926 I 0.806
GLYMA07G33600 Glycine max GLYMA07G33600 I 0.805
Bo7g116570 Brassica oleracea Bo7g116570 I 0.805
TRIUR3_26781 Triticum urartu TRIUR3_26781 I 0.804
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I 0.804
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I 0.804
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I 0.804
GRMZM2G002075 Zea mays GRMZM2G002075 I 0.803
Eucgr.G01436 Eucalyptus grandis Eucgr.G01436 I 0.803
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I 0.803
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I 0.802
ABF2 Arabidopsis thaliana AT1G45249 D 0.801
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I 0.801
Bo6g006970 Brassica oleracea Bo6g006970 I 0.801
Bra040260 Brassica rapa Bra040260 I 0.801
Carubv10009177m.g Capsella rubella Carubv10009177m.g I 0.801
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I 0.801
Bo1g007700 Brassica oleracea Bo1g007700 I 0.801
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I 0.801
Pm005288 Prunus mume Pm005288 I 0.801
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I 0.801
OB02G40680 Oryza brachyantha OB02G40680 I 0.800
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I 0.800
GRMZM2G478417 Zea mays GRMZM2G478417 I 0.800
GRMZM2G157722 Zea mays GRMZM2G157722 I 0.800
Sb06g026410 Sorghum bicolor Sb06g026410 I 0.799
ABI5 Populus trichocarpa POPTR_0006s08300 I 0.799
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I 0.799
OS08G0471950 Oryza sativa OS08G0471950 D 0.799
Solyc09g009490.2 Solanum lycopersicum Solyc09g009490.2 I 0.798
Bo1g114840 Brassica oleracea Bo1g114840 I 0.798
MLOC_53580 Hordeum vulgare MLOC_53580 N 0.797
Traes_6AL_E8CD2C02B Triticum aestivum Traes_6AL_E8CD2C02B N 0.797
VIT_03s0063g00310 Vitis vinifera VIT_03s0063g00310 I 0.797
Solyc04g078840.2 Solanum lycopersicum Solyc04g078840.2 I 0.797
OLONG_001053 Oryza longistaminata OLONG_001053 I 0.797
GSMUA_Achr6G04270_001 Musa acuminata GSMUA_Achr6G04270_001 I 0.797
GSMUA_Achr5G24570_001 Musa acuminata GSMUA_Achr5G24570_001 I 0.796
MDP0000296303 Malus domestica MDP0000296303 I 0.795
Pavir.J00256 Panicum virgatum Pavir.J00256 I 0.795
SapurV1A.0374s0070 Salix purpurea SapurV1A.0374s0070 I 0.795
POPTR_0009s16610 Populus trichocarpa POPTR_0009s16610 I 0.795
Sb08g003760 Sorghum bicolor Sb08g003760 I 0.794
BRADI4G32090 Brachypodium distachyon BRADI4G32090 I 0.794
cassava16074.m1 Manihot esculenta cassava16074.m1 I 0.794
TRAES3BF099600130CFD_g Triticum aestivum TRAES3BF099600130CFD_g I 0.793
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I 0.793
MLOC_34679 Hordeum vulgare MLOC_34679 I 0.793
TRAES3BF111600160CFD_g Triticum aestivum TRAES3BF111600160CFD_g I 0.793
TCM_022574 Theobroma cacao TCM_022574 I 0.793
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I 0.793
30055.m001548 Ricinus communis 30055.m001548 I 0.793
F775_32479 Aegilops tauschii F775_32479 I 0.793
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I 0.792
LPERR02G27610 Leersia perrieri LPERR02G27610 I 0.792
Eucgr.I01145 Eucalyptus grandis Eucgr.I01145 I 0.792
GSMUA_Achr3G22710_001 Musa acuminata GSMUA_Achr3G22710_001 I 0.792
Pavir.J35078 Panicum virgatum Pavir.J35078 I 0.792
OBART01G37980 Oryza barthii OBART01G37980 I 0.791
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I 0.791
OMERI01G34950 Oryza meridionalis OMERI01G34950 I 0.791
OLONG_014546 Oryza longistaminata OLONG_014546 I 0.791
BGIOSGA004837 Oryza indica BGIOSGA004837 I 0.791
GRMZM2G168079 Zea mays GRMZM2G168079 I 0.791
Bostr.26675s0197 Boechera stricta Bostr.26675s0197 I 0.791
LPERR01G32620 Leersia perrieri LPERR01G32620 I 0.791
ABI5 Arabidopsis thaliana AT2G36270 D 0.791
OB01G46760 Oryza brachyantha OB01G46760 I 0.791
ONIVA04G25730 Oryza nivara ONIVA04G25730 I 0.791
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I 0.791
OS01G0859300 Oryza sativa OS01G0859300 I 0.791
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I 0.791
evm.TU.supercontig_5.28 Carica papaya evm.TU.supercontig_5.28 I 0.791
Si017618m.g Setaria italica Si017618m.g I 0.790
Bo6g018480 Brassica oleracea Bo6g018480 I 0.790
Sb04g034190 Sorghum bicolor Sb04g034190 I 0.790
GSMUA_Achr8G07740_001 Musa acuminata GSMUA_Achr8G07740_001 I 0.790
Carubv10009399m.g Capsella rubella Carubv10009399m.g I 0.789
Bra018800 Brassica rapa Bra018800 I 0.787
MTR_4g085910 Medicago truncatula MTR_4g085910 I 0.787
Ca_06458 Cicer arietinum Ca_06458 I 0.787
GLYMA10G08370 Glycine max GLYMA10G08370 I 0.786
ONIVA08G19830 Oryza nivara ONIVA08G19830 I 0.786
OLONG_000475 Oryza longistaminata OLONG_000475 I 0.786
Bostr.12302s0127 Boechera stricta Bostr.12302s0127 I 0.786
Lus10009755.g Linum usitatissimum Lus10009755.g I 0.786
mgf002176m Mimulus guttatus mgf002176m I 0.785
cassava11518.m1 Manihot esculenta cassava11518.m1 I 0.785
29625.m000702 Ricinus communis 29625.m000702 I 0.785
Lus10022720.g Linum usitatissimum Lus10022720.g I 0.785
GLYMA13G22061 Glycine max GLYMA13G22061 I 0.785
Lus10021369.g Linum usitatissimum Lus10021369.g I 0.785
Lus10014194.g Linum usitatissimum Lus10014194.g I 0.785
Bra011485 Brassica rapa Bra011485 I 0.783
TRIUR3_33995 Triticum urartu TRIUR3_33995 I 0.783