Bo1g114840 (Brassica oleracea)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bo1g114840 T057249_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ABF2
M01771_2.00 		Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN		 PBM
Weirauch et al.(2014)
pTH8103 		0.825 0.758
ABF2
M06755_2.00 		Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN		 Dap-seq
OMalley et al.(2016)
ABF2_col_v3a 		0.825 0.758
PK18009.1
M01158_2.00 		Cannabis sativa
NNACACGTGN
NCACGTGTNN		 PBM
Lambert et al.(2019)
pTH10272 		0.807 0.774
OS08G0471950
M10047_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TRAB1_Q2 		0.800 0.645
ABF4
M01056_2.00 		Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7315 		0.794 0.887
ABF4
M01057_2.00 		Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN		 PBM
Sullivan et al.(2014)
pTH7551 		0.794 0.887
ABF4
M09911_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF4_Q2 		0.794 0.887
ABF3
M01782_2.00 		Arabidopsis thaliana
ACACGTGT
ACACGTGT		 PBM
Weirauch et al.(2014)
pTH7240 		0.785 0.613
ABF3
M09912_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF3_Q2 		0.785 0.613
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g114840.1 bZIP 313 374

Links

Other bZIP family TFs
Other Brassica oleracea TFs

186 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.008G024700 Gossypium raimondii Gorai.008G024700 I 0.832
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I 0.831
Ca_06458 Cicer arietinum Ca_06458 I 0.830
MTR_4g085910 Medicago truncatula MTR_4g085910 I 0.830
Carubv10013729m.g Capsella rubella Carubv10013729m.g I 0.828
Bra040260 Brassica rapa Bra040260 I 0.825
Bo6g006970 Brassica oleracea Bo6g006970 I 0.825
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I 0.825
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I 0.825
ABF2 Arabidopsis thaliana AT1G45249 D 0.825
Solyc01g108080.2 Solanum lycopersicum Solyc01g108080.2 I 0.824
PGSC0003DMG400025889 Solanum tuberosum PGSC0003DMG400025889 I 0.824
Bo6g018480 Brassica oleracea Bo6g018480 I 0.823
PGSC0003DMG400006211 Solanum tuberosum PGSC0003DMG400006211 I 0.822
Cla016272 Citrullus lanatus Cla016272 I 0.821
Cucsa.219780 Cucumis sativus Cucsa.219780 I 0.821
Carubv10009177m.g Capsella rubella Carubv10009177m.g I 0.821
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I 0.821
ABF3 Arabidopsis thaliana AT4G34000 D 0.821
GLYMA07G33600 Glycine max GLYMA07G33600 I 0.820
ABF4 Arabidopsis thaliana AT3G19290 D 0.819
TRIUR3_26781 Triticum urartu TRIUR3_26781 I 0.816
Bo3g073080 Brassica oleracea Bo3g073080 I 0.815
Lus10014066.g Linum usitatissimum Lus10014066.g I 0.814
GSMUA_Achr6G04270_001 Musa acuminata GSMUA_Achr6G04270_001 I 0.813
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I 0.813
MDP0000701734 Malus domestica MDP0000701734 I 0.813
Cucsa.385090 Cucumis sativus Cucsa.385090 I 0.813
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I 0.813
Si030114m.g Setaria italica Si030114m.g I 0.813
Thhalv10025203m.g Eutrema salsugineum Thhalv10025203m.g I 0.812
PGSC0003DMG400022931 Solanum tuberosum PGSC0003DMG400022931 I 0.812
orange1.1g013197m.g Citrus sinensis orange1.1g013197m.g I 0.812
Ciclev10028435m.g Citrus clementina Ciclev10028435m.g I 0.812
Lus10027897.g Linum usitatissimum Lus10027897.g I 0.811
Si013904m.g Setaria italica Si013904m.g I 0.810
Bra037533 Brassica rapa Bra037533 I 0.808
Thhalv10020772m.g Eutrema salsugineum Thhalv10020772m.g I 0.808
Bo5g115300 Brassica oleracea Bo5g115300 I 0.808
MLOC_66546 Hordeum vulgare MLOC_66546 I 0.808
Bra022409 Brassica rapa Bra022409 I 0.808
GSMUA_Achr5G05690_001 Musa acuminata GSMUA_Achr5G05690_001 I 0.807
OB09G19140 Oryza brachyantha OB09G19140 I 0.807
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I 0.807
PK18009.1 Cannabis sativa PK18009.1 D 0.807
Gorai.013G044500 Gossypium raimondii Gorai.013G044500 I 0.806
Bostr.12302s0127 Boechera stricta Bostr.12302s0127 I 0.806
Solyc10g050210.1 Solanum lycopersicum Solyc10g050210.1 I 0.806
ABF1 Arabidopsis thaliana AT1G49720 D 0.806
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I 0.805
Cucsa.396070 Cucumis sativus Cucsa.396070 I 0.805
Carubv10009399m.g Capsella rubella Carubv10009399m.g I 0.805
Pavir.Ba02029 Panicum virgatum Pavir.Ba02029 I 0.805
OLONG_000475 Oryza longistaminata OLONG_000475 I 0.804
ONIVA08G19830 Oryza nivara ONIVA08G19830 I 0.804
GRMZM2G157722 Zea mays GRMZM2G157722 I 0.804
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I 0.803
Pm005288 Prunus mume Pm005288 I 0.803
Bostr.26675s0197 Boechera stricta Bostr.26675s0197 I 0.803
Lus10002399.g Linum usitatissimum Lus10002399.g I 0.802
Pavir.Fa00674 Panicum virgatum Pavir.Fa00674 I 0.801
GSMUA_Achr9G27130_001 Musa acuminata GSMUA_Achr9G27130_001 I 0.801
OBART08G17810 Oryza barthii OBART08G17810 I 0.801
ORGLA09G0097200 Oryza glaberrima ORGLA09G0097200 I 0.800
OS08G0471950 Oryza sativa OS08G0471950 D 0.800
OS09G0456200 Oryza sativa OS09G0456200 I 0.800
BGIOSGA030899 Oryza indica BGIOSGA030899 I 0.800
LPERR09G09170 Leersia perrieri LPERR09G09170 I 0.800
OMERI09G10130 Oryza meridionalis OMERI09G10130 I 0.800
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I 0.800
OPUNC09G11090 Oryza punctata OPUNC09G11090 I 0.800
OGLUM09G13130 Oryza glumaepatula OGLUM09G13130 I 0.800
POPTR_0009s10400 Populus trichocarpa POPTR_0009s10400 I 0.799
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I 0.799
GLYMA02G14880 Glycine max GLYMA02G14880 N 0.799
gene28250-v1.0-hybrid Fragaria vesca gene28250-v1.0-hybrid I 0.799
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I 0.799
cassava42745.valid.m1 Manihot esculenta cassava42745.valid.m1 I 0.798
cassava42744.valid.m1 Manihot esculenta cassava42744.valid.m1 I 0.798
Cagra.4978s0002 Capsella grandiflora Cagra.4978s0002 I 0.798
Aquca_007_00660 Aquilegia coerulea Aquca_007_00660 I 0.798
cassava42743.valid.m1 Manihot esculenta cassava42743.valid.m1 I 0.798
Pavir.Fb01750 Panicum virgatum Pavir.Fb01750 I 0.798
ABF4 Arabidopsis lyrata fgenesh2_kg.3__2145__AT3G19290.1 I 0.798
Pm021430 Prunus mume Pm021430 I 0.797
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I 0.797
Sb06g026410 Sorghum bicolor Sb06g026410 I 0.797
Eucgr.G01436 Eucalyptus grandis Eucgr.G01436 I 0.797
MDP0000248567 Malus domestica MDP0000248567 I 0.797
PRUPE_ppa006752mg Prunus persica PRUPE_ppa006752mg I 0.797
TCM_007074 Theobroma cacao TCM_007074 I 0.797
Eucgr.I01145 Eucalyptus grandis Eucgr.I01145 I 0.797
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I 0.796
Bra011485 Brassica rapa Bra011485 I 0.796
evm.TU.supercontig_62.4 Carica papaya evm.TU.supercontig_62.4 I 0.795
ABF2 Vitis vinifera VIT_18s0001g10450 I 0.794
GLYMA10G08370 Glycine max GLYMA10G08370 I 0.794
Ca_01548 Cicer arietinum Ca_01548 I 0.794
Sb07g022965 Sorghum bicolor Sb07g022965 I 0.794
Solyc04g078840.2 Solanum lycopersicum Solyc04g078840.2 I 0.794
GRMZM2G478417 Zea mays GRMZM2G478417 I 0.794
GLYMA06G04353 Glycine max GLYMA06G04353 I 0.794
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I 0.794
GLYMA04G04170 Glycine max GLYMA04G04170 I 0.794
Sb08g003760 Sorghum bicolor Sb08g003760 I 0.794
Solyc11g044560.1 Solanum lycopersicum Solyc11g044560.1 I 0.794
mgf014602m Mimulus guttatus mgf014602m I 0.793
Bra018800 Brassica rapa Bra018800 I 0.793
Cla022926 Citrullus lanatus Cla022926 I 0.793
mgf007524m Mimulus guttatus mgf007524m I 0.793
mgf002047m Mimulus guttatus mgf002047m I 0.793
ABF1 Arabidopsis lyrata fgenesh2_kg.1__4055__AT1G49720.1 I 0.792
POPTR_0014s02810 Populus trichocarpa POPTR_0014s02810 I 0.792
SapurV1A.0878s0160 Salix purpurea SapurV1A.0878s0160 I 0.792
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I 0.792
POPTR_0002s12710 Populus trichocarpa POPTR_0002s12710 I 0.792
MTR_3g101780 Medicago truncatula MTR_3g101780 I 0.792
cassava42669.valid.m1 Manihot esculenta cassava42669.valid.m1 I 0.792
Lus10021369.g Linum usitatissimum Lus10021369.g I 0.792
30170.m013868 Ricinus communis 30170.m013868 I 0.792
cassava12275.valid.m1 Manihot esculenta cassava12275.valid.m1 I 0.792
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I 0.791
Si017618m.g Setaria italica Si017618m.g I 0.791
Thhalv10012271m.g Eutrema salsugineum Thhalv10012271m.g I 0.791
MDP0000296303 Malus domestica MDP0000296303 I 0.791
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I 0.790
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I 0.790
TCM_033824 Theobroma cacao TCM_033824 I 0.790
GLYMA13G22061 Glycine max GLYMA13G22061 I 0.790
BRADI4G32090 Brachypodium distachyon BRADI4G32090 I 0.790
mgf002176m Mimulus guttatus mgf002176m I 0.790
cassava11518.m1 Manihot esculenta cassava11518.m1 I 0.790
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I 0.789
ORUFI08G19970 Oryza rufipogon ORUFI08G19970 I 0.789
BGIOSGA028831 Oryza indica BGIOSGA028831 I 0.789
ORGLA08G0211300 Oryza glaberrima ORGLA08G0211300 I 0.789
LPERR08G14740 Leersia perrieri LPERR08G14740 I 0.789
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I 0.789
PK02169.1 Cannabis sativa PK02169.1 I 0.789
OPUNC08G15700 Oryza punctata OPUNC08G15700 I 0.789
OBART02G33770 Oryza barthii OBART02G33770 I 0.789
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I 0.789
OB02G40680 Oryza brachyantha OB02G40680 I 0.789
cassava17300.m1 Manihot esculenta cassava17300.m1 I 0.788
Lus10009755.g Linum usitatissimum Lus10009755.g I 0.788
29801.m003176 Ricinus communis 29801.m003176 I 0.787
SELMODRAFT_266892 Selaginella moellendorffii SELMODRAFT_266892 I 0.787
mgf020824m Mimulus guttatus mgf020824m I 0.787
SELMODRAFT_443424 Selaginella moellendorffii SELMODRAFT_443424 I 0.787
F775_32479 Aegilops tauschii F775_32479 I 0.786
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I 0.786
MLOC_34679 Hordeum vulgare MLOC_34679 I 0.786
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I 0.786
TRIUR3_31111 Triticum urartu TRIUR3_31111 I 0.786
OB08G24950 Oryza brachyantha OB08G24950 I 0.785
Carubv10006251m.g Capsella rubella Carubv10006251m.g I 0.785
Bostr.7867s1253 Boechera stricta Bostr.7867s1253 I 0.785
ABF3 Arabidopsis lyrata fgenesh2_kg.7__705__AT4G34000.1 I 0.785
cassava32856.m1 Manihot esculenta cassava32856.m1 I 0.785
Cagra.2481s0016 Capsella grandiflora Cagra.2481s0016 I 0.785
Cagra.1305s0026 Capsella grandiflora Cagra.1305s0026 I 0.785
OMERI01G34950 Oryza meridionalis OMERI01G34950 I 0.784
LPERR01G32620 Leersia perrieri LPERR01G32620 I 0.784
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I 0.784
Pavir.J35078 Panicum virgatum Pavir.J35078 I 0.784
GRMZM2G168079 Zea mays GRMZM2G168079 I 0.784
GSMUA_Achr3G07000_001 Musa acuminata GSMUA_Achr3G07000_001 I 0.784
Sb02g026570 Sorghum bicolor Sb02g026570 N 0.784
BGIOSGA004837 Oryza indica BGIOSGA004837 I 0.784
OBART01G37980 Oryza barthii OBART01G37980 I 0.784
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I 0.784
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I 0.784
ONIVA04G25730 Oryza nivara ONIVA04G25730 I 0.784
OB01G46760 Oryza brachyantha OB01G46760 I 0.784
OLONG_014546 Oryza longistaminata OLONG_014546 I 0.784
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I 0.784
OS01G0859300 Oryza sativa OS01G0859300 I 0.784
VIT_03s0063g00310 Vitis vinifera VIT_03s0063g00310 I 0.783
DPBF2 Vitis vinifera VIT_06s0080g00340 I 0.783
TRIUR3_29638 Triticum urartu TRIUR3_29638 I 0.783
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I 0.783
Aquca_072_00142 Aquilegia coerulea Aquca_072_00142 I 0.783
Bo7g116570 Brassica oleracea Bo7g116570 I 0.782
GRMZM2G002075 Zea mays GRMZM2G002075 I 0.782
PGSC0003DMG400002660 Solanum tuberosum PGSC0003DMG400002660 I 0.782
ABI5 Arabidopsis thaliana AT2G36270 D 0.782