Si013904m.g (Setaria italica)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Si013904m.g T067990_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ABF3
M01782_2.00
Arabidopsis thaliana
ACACGTGT

ACACGTGT
PBM
Weirauch et al.(2014)
pTH7240
0.817 0.684
PK18009.1
M01158_2.00
Cannabis sativa
NNACACGTGN

NCACGTGTNN
PBM
Lambert et al.(2019)
pTH10272
0.832 0.800
ABF4
M01056_2.00
Arabidopsis thaliana
NNMCACGTGKNN

NNMCACGTGKNN
PBM
Sullivan et al.(2014)
pTH7315
0.825 0.800
ABF3
M09912_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF3_Q2
0.817 0.684
ABF4
M01057_2.00
Arabidopsis thaliana
NDMYAVNWNN

NNWNBTRKHN
PBM
Sullivan et al.(2014)
pTH7551
0.825 0.800
ABF4
M09911_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF4_Q2
0.825 0.800
ABF1
M01772_2.00
Arabidopsis thaliana
NNMCACGTGNN

NNCACGTGKNN
PBM
Weirauch et al.(2014)
pTH8837
0.817 0.683
ABF2
M01771_2.00
Arabidopsis thaliana
NNYACGTGTHNNN

NNNDACACGTRNN
PBM
Weirauch et al.(2014)
pTH8103
0.802 0.860
ABF1
M01773_2.00
Arabidopsis thaliana
NMCACGTGKN

NMCACGTGKN
PBM
Weirauch et al.(2014)
pTH8853
0.817 0.683
ABF2
M06755_2.00
Arabidopsis thaliana
NNWNNTGMCACGTSWBMH

DKVWSACGTGKCANNWNN
Dap-seq
OMalley et al.(2016)
ABF2_col_v3a
0.802 0.860
OS08G0471950
M10047_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TRAB1_Q2
0.801 0.789
ABF1
M02656_2.00
Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC

GRHCACGTGGCVVVVVVVV
SELEX
Mathelier et al.(2014)
MA0570.1
0.817 0.683
ABF1
M09906_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_01
0.817 0.683
ABF1
M09907_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_02
0.817 0.683
ABF1
M09908_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_03
0.817 0.683
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si013904m bZIP 280 336
Si013979m bZIP 280 339

Links

Other bZIP family TFs
Other Setaria italica TFs

230 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Pavir.Fa00674 Panicum virgatum Pavir.Fa00674 I 0.856
LPERR09G09170 Leersia perrieri LPERR09G09170 I 0.854
ORGLA09G0097200 Oryza glaberrima ORGLA09G0097200 I 0.849
OPUNC09G11090 Oryza punctata OPUNC09G11090 I 0.849
BGIOSGA030899 Oryza indica BGIOSGA030899 I 0.849
OMERI09G10130 Oryza meridionalis OMERI09G10130 I 0.849
OS09G0456200 Oryza sativa OS09G0456200 I 0.849
Cla016272 Citrullus lanatus Cla016272 I 0.849
OGLUM09G13130 Oryza glumaepatula OGLUM09G13130 I 0.849
Cucsa.219780 Cucumis sativus Cucsa.219780 I 0.849
mgf007524m Mimulus guttatus mgf007524m I 0.846
mgf002047m Mimulus guttatus mgf002047m I 0.846
mgf014602m Mimulus guttatus mgf014602m I 0.846
Pm021430 Prunus mume Pm021430 I 0.845
PRUPE_ppa006752mg Prunus persica PRUPE_ppa006752mg I 0.845
gene28250-v1.0-hybrid Fragaria vesca gene28250-v1.0-hybrid I 0.844
GSMUA_Achr9G27130_001 Musa acuminata GSMUA_Achr9G27130_001 I 0.844
Sb07g022965 Sorghum bicolor Sb07g022965 I 0.841
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I 0.840
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I 0.840
Lus10002399.g Linum usitatissimum Lus10002399.g I 0.840
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I 0.840
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I 0.840
Si030114m.g Setaria italica Si030114m.g I 0.840
PK02169.1 Cannabis sativa PK02169.1 I 0.840
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I 0.838
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I 0.838
TCM_033824 Theobroma cacao TCM_033824 I 0.838
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I 0.838
TCM_007074 Theobroma cacao TCM_007074 I 0.837
ABF2 Vitis vinifera VIT_18s0001g10450 I 0.837
Gorai.013G044500 Gossypium raimondii Gorai.013G044500 I 0.837
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I 0.837
MDP0000248567 Malus domestica MDP0000248567 I 0.837
OGLUM02G34210 Oryza glumaepatula OGLUM02G34210 I 0.836
ORUFI02G35260 Oryza rufipogon ORUFI02G35260 I 0.836
cassava42669.valid.m1 Manihot esculenta cassava42669.valid.m1 I 0.836
MTR_3g101780 Medicago truncatula MTR_3g101780 I 0.836
cassava12275.valid.m1 Manihot esculenta cassava12275.valid.m1 I 0.836
30170.m013868 Ricinus communis 30170.m013868 I 0.836
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I 0.836
POPTR_0002s12710 Populus trichocarpa POPTR_0002s12710 I 0.836
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I 0.836
POPTR_0014s02810 Populus trichocarpa POPTR_0014s02810 I 0.836
BGIOSGA005551 Oryza indica BGIOSGA005551 I 0.836
SapurV1A.0878s0160 Salix purpurea SapurV1A.0878s0160 I 0.836
BZIP23 Oryza sativa OS02G0766700 I 0.836
ONIVA02G33490 Oryza nivara ONIVA02G33490 I 0.836
Pavir.Fb01750 Panicum virgatum Pavir.Fb01750 I 0.836
OMERI02G32150 Oryza meridionalis OMERI02G32150 I 0.836
Pavir.Ba02029 Panicum virgatum Pavir.Ba02029 I 0.835
orange1.1g013197m.g Citrus sinensis orange1.1g013197m.g I 0.834
Ca_01548 Cicer arietinum Ca_01548 I 0.834
Ciclev10028435m.g Citrus clementina Ciclev10028435m.g I 0.834
GLYMA06G04353 Glycine max GLYMA06G04353 I 0.834
GLYMA04G04170 Glycine max GLYMA04G04170 I 0.834
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I 0.833
PGSC0003DMG400006211 Solanum tuberosum PGSC0003DMG400006211 I 0.833
cassava42744.valid.m1 Manihot esculenta cassava42744.valid.m1 I 0.832
cassava42745.valid.m1 Manihot esculenta cassava42745.valid.m1 I 0.832
cassava42743.valid.m1 Manihot esculenta cassava42743.valid.m1 I 0.832
PK18009.1 Cannabis sativa PK18009.1 D 0.832
ORGLA02G0292000 Oryza glaberrima ORGLA02G0292000 I 0.831
evm.TU.supercontig_62.4 Carica papaya evm.TU.supercontig_62.4 I 0.831
POPTR_0009s10400 Populus trichocarpa POPTR_0009s10400 I 0.830
Bra037533 Brassica rapa Bra037533 I 0.830
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I 0.830
Bo5g115300 Brassica oleracea Bo5g115300 I 0.830
Bra022409 Brassica rapa Bra022409 I 0.830
Thhalv10020772m.g Eutrema salsugineum Thhalv10020772m.g I 0.830
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I 0.829
GRMZM2G002075 Zea mays GRMZM2G002075 I 0.829
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I 0.828
Lus10014066.g Linum usitatissimum Lus10014066.g I 0.827
GRMZM2G157722 Zea mays GRMZM2G157722 I 0.826
PGSC0003DMG400025889 Solanum tuberosum PGSC0003DMG400025889 I 0.826
Solyc01g108080.2 Solanum lycopersicum Solyc01g108080.2 I 0.826
GRMZM2G478417 Zea mays GRMZM2G478417 I 0.826
Cagra.2481s0016 Capsella grandiflora Cagra.2481s0016 I 0.826
ABF4 Arabidopsis lyrata fgenesh2_kg.3__2145__AT3G19290.1 I 0.825
Bo3g073080 Brassica oleracea Bo3g073080 I 0.825
Cagra.4978s0002 Capsella grandiflora Cagra.4978s0002 I 0.825
Carubv10013729m.g Capsella rubella Carubv10013729m.g I 0.825
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I 0.825
ABF4 Arabidopsis thaliana AT3G19290 D 0.825
Eucgr.G01436 Eucalyptus grandis Eucgr.G01436 I 0.824
Gorai.008G024700 Gossypium raimondii Gorai.008G024700 I 0.823
Solyc04g078840.2 Solanum lycopersicum Solyc04g078840.2 I 0.823
GLYMA07G33600 Glycine max GLYMA07G33600 I 0.822
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I 0.822
PGSC0003DMG400022931 Solanum tuberosum PGSC0003DMG400022931 I 0.821
Solyc11g044560.1 Solanum lycopersicum Solyc11g044560.1 I 0.821
TRIUR3_26781 Triticum urartu TRIUR3_26781 I 0.820
GSMUA_Achr3G07000_001 Musa acuminata GSMUA_Achr3G07000_001 I 0.820
Solyc10g050210.1 Solanum lycopersicum Solyc10g050210.1 I 0.818
Carubv10006251m.g Capsella rubella Carubv10006251m.g I 0.818
OB09G19140 Oryza brachyantha OB09G19140 I 0.818
ABF1 Arabidopsis lyrata fgenesh2_kg.1__4055__AT1G49720.1 I 0.818
ABF3 Arabidopsis thaliana AT4G34000 D 0.818
Cucsa.396070 Cucumis sativus Cucsa.396070 I 0.818
Cla022926 Citrullus lanatus Cla022926 I 0.818
ABF3 Arabidopsis lyrata fgenesh2_kg.7__705__AT4G34000.1 I 0.818
Cagra.1305s0026 Capsella grandiflora Cagra.1305s0026 I 0.818
Bostr.7867s1253 Boechera stricta Bostr.7867s1253 I 0.818
Lus10027897.g Linum usitatissimum Lus10027897.g I 0.818
MLOC_66546 Hordeum vulgare MLOC_66546 I 0.817
OB08G24950 Oryza brachyantha OB08G24950 I 0.817
ABF1 Arabidopsis thaliana AT1G49720 D 0.817
OBART02G33770 Oryza barthii OBART02G33770 I 0.817
Thhalv10012271m.g Eutrema salsugineum Thhalv10012271m.g I 0.817
GSMUA_Achr5G05690_001 Musa acuminata GSMUA_Achr5G05690_001 I 0.814
Ca_06458 Cicer arietinum Ca_06458 I 0.813
Thhalv10025203m.g Eutrema salsugineum Thhalv10025203m.g I 0.813
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I 0.813
MTR_4g085910 Medicago truncatula MTR_4g085910 I 0.813
29801.m003176 Ricinus communis 29801.m003176 I 0.813
Bo7g116570 Brassica oleracea Bo7g116570 I 0.812
mgf020824m Mimulus guttatus mgf020824m I 0.812
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I 0.811
Bo1g114840 Brassica oleracea Bo1g114840 I 0.810
Eucgr.I01145 Eucalyptus grandis Eucgr.I01145 I 0.809
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I 0.808
Bo6g006970 Brassica oleracea Bo6g006970 I 0.808
ABF2 Arabidopsis thaliana AT1G45249 D 0.808
Bra040260 Brassica rapa Bra040260 I 0.808
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I 0.808
Carubv10009177m.g Capsella rubella Carubv10009177m.g I 0.808
LPERR08G14740 Leersia perrieri LPERR08G14740 I 0.808
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I 0.808
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I 0.808
OPUNC08G15700 Oryza punctata OPUNC08G15700 I 0.807
ORGLA08G0211300 Oryza glaberrima ORGLA08G0211300 I 0.807
BGIOSGA028831 Oryza indica BGIOSGA028831 I 0.807
ORUFI08G19970 Oryza rufipogon ORUFI08G19970 I 0.807
Bostr.26675s0197 Boechera stricta Bostr.26675s0197 I 0.807
Bra018800 Brassica rapa Bra018800 I 0.806
Bo6g018480 Brassica oleracea Bo6g018480 I 0.806
Carubv10009399m.g Capsella rubella Carubv10009399m.g I 0.806
BRADI4G32090 Brachypodium distachyon BRADI4G32090 I 0.805
VIT_03s0063g00310 Vitis vinifera VIT_03s0063g00310 I 0.804
OBART08G17810 Oryza barthii OBART08G17810 I 0.803
LPERR02G27610 Leersia perrieri LPERR02G27610 I 0.803
Pm005288 Prunus mume Pm005288 I 0.803
OLONG_000475 Oryza longistaminata OLONG_000475 I 0.803
Bo1g007700 Brassica oleracea Bo1g007700 I 0.803
OLONG_001053 Oryza longistaminata OLONG_001053 I 0.803
GSMUA_Achr6G04270_001 Musa acuminata GSMUA_Achr6G04270_001 I 0.803
ONIVA08G19830 Oryza nivara ONIVA08G19830 I 0.803
Pavir.J00256 Panicum virgatum Pavir.J00256 I 0.802
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I 0.802
MDP0000296303 Malus domestica MDP0000296303 I 0.802
MDP0000701734 Malus domestica MDP0000701734 I 0.802
OB02G40680 Oryza brachyantha OB02G40680 I 0.802
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I 0.802
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I 0.802
Sb06g026410 Sorghum bicolor Sb06g026410 I 0.801
OS08G0471950 Oryza sativa OS08G0471950 D 0.801
Bra011485 Brassica rapa Bra011485 I 0.801
Lus10017049.g Linum usitatissimum Lus10017049.g I 0.800
GSMUA_Achr5G24570_001 Musa acuminata GSMUA_Achr5G24570_001 I 0.800
Pavir.J35078 Panicum virgatum Pavir.J35078 I 0.799
GSMUA_Achr3G22710_001 Musa acuminata GSMUA_Achr3G22710_001 I 0.799
OLONG_014546 Oryza longistaminata OLONG_014546 I 0.798
LPERR01G32620 Leersia perrieri LPERR01G32620 I 0.798
Lus10006489.g Linum usitatissimum Lus10006489.g I 0.798
OMERI01G34950 Oryza meridionalis OMERI01G34950 I 0.798
ONIVA04G25730 Oryza nivara ONIVA04G25730 I 0.798
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I 0.798
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I 0.798
OS01G0859300 Oryza sativa OS01G0859300 I 0.798
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I 0.798
OB01G46760 Oryza brachyantha OB01G46760 I 0.798
OBART01G37980 Oryza barthii OBART01G37980 I 0.798
BGIOSGA004837 Oryza indica BGIOSGA004837 I 0.798
GRMZM2G168079 Zea mays GRMZM2G168079 I 0.797
GSMUA_Achr8G07740_001 Musa acuminata GSMUA_Achr8G07740_001 I 0.797
cassava32856.m1 Manihot esculenta cassava32856.m1 I 0.797
Sb04g034190 Sorghum bicolor Sb04g034190 I 0.796
Si017618m.g Setaria italica Si017618m.g I 0.796
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I 0.796
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I 0.796
TRAES3BF111600160CFD_g Triticum aestivum TRAES3BF111600160CFD_g I 0.796
MLOC_34679 Hordeum vulgare MLOC_34679 I 0.796
TRAES3BF099600130CFD_g Triticum aestivum TRAES3BF099600130CFD_g I 0.796
F775_32479 Aegilops tauschii F775_32479 I 0.796
Aquca_007_00660 Aquilegia coerulea Aquca_007_00660 I 0.795
SapurV1A.0374s0070 Salix purpurea SapurV1A.0374s0070 I 0.795
POPTR_0009s16610 Populus trichocarpa POPTR_0009s16610 I 0.795
cassava16074.m1 Manihot esculenta cassava16074.m1 I 0.794
Sb08g003760 Sorghum bicolor Sb08g003760 I 0.794
ABI5 Arabidopsis thaliana AT2G36270 D 0.793
30055.m001548 Ricinus communis 30055.m001548 I 0.793
Bostr.12302s0127 Boechera stricta Bostr.12302s0127 I 0.793
Lus10022720.g Linum usitatissimum Lus10022720.g I 0.792
29625.m000702 Ricinus communis 29625.m000702 I 0.792
Lus10014194.g Linum usitatissimum Lus10014194.g I 0.792
Cucsa.241090 Cucumis sativus Cucsa.241090 I 0.790
Lus10021369.g Linum usitatissimum Lus10021369.g I 0.788
Ca_00791 Cicer arietinum Ca_00791 I 0.788
Lus10009755.g Linum usitatissimum Lus10009755.g I 0.788
Cucsa.385090 Cucumis sativus Cucsa.385090 I 0.788
OMERI06G08210 Oryza meridionalis OMERI06G08210 I 0.787
BGIOSGA040605 Oryza indica BGIOSGA040605 I 0.787
mgf002176m Mimulus guttatus mgf002176m I 0.787
ORGLA06G0066000 Oryza glaberrima ORGLA06G0066000 I 0.787
BGIOSGA022536 Oryza indica BGIOSGA022536 I 0.787
cassava11518.m1 Manihot esculenta cassava11518.m1 I 0.787
ONIVA06G08350 Oryza nivara ONIVA06G08350 I 0.787
GLYMA13G22061 Glycine max GLYMA13G22061 I 0.787
LPERR06G06440 Leersia perrieri LPERR06G06440 I 0.787
MTR_7g104480 Medicago truncatula MTR_7g104480 I 0.787
OGLUM06G07500 Oryza glumaepatula OGLUM06G07500 I 0.787
OBART06G07070 Oryza barthii OBART06G07070 I 0.787
TCM_022574 Theobroma cacao TCM_022574 I 0.787
ABI5 Populus trichocarpa POPTR_0006s08300 I 0.787
SELMODRAFT_443424 Selaginella moellendorffii SELMODRAFT_443424 I 0.787
GLYMA10G08370 Glycine max GLYMA10G08370 I 0.787
OB06G16510 Oryza brachyantha OB06G16510 I 0.787
OPUNC06G06690 Oryza punctata OPUNC06G06690 I 0.787
Si006889m.g Setaria italica Si006889m.g I 0.786
GRMZM2G033413 Zea mays GRMZM2G033413 I 0.786
Pavir.Da01931 Panicum virgatum Pavir.Da01931 I 0.786
ORUFI12G20810 Oryza rufipogon ORUFI12G20810 I 0.786
TRIUR3_33995 Triticum urartu TRIUR3_33995 I 0.786
BZIP46 Oryza sativa OS06G0211200 I 0.786
TRIUR3_31111 Triticum urartu TRIUR3_31111 I 0.784
OPUNC05G18710 Oryza punctata OPUNC05G18710 I 0.783
SELMODRAFT_266892 Selaginella moellendorffii SELMODRAFT_266892 I 0.783
OPUNC01G36800 Oryza punctata OPUNC01G36800 I 0.782