Gorai.005G237400 (Gossypium raimondii)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Gorai.005G237400 T071918_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ABF3
M01782_2.00
Arabidopsis thaliana
ACACGTGT

ACACGTGT
PBM
Weirauch et al.(2014)
pTH7240
0.809 0.792
ABF3
M09912_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF3_Q2
0.809 0.792
ABF4
M01056_2.00
Arabidopsis thaliana
NNMCACGTGKNN

NNMCACGTGKNN
PBM
Sullivan et al.(2014)
pTH7315
0.828 0.742
OS08G0471950
M10047_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TRAB1_Q2
0.809 0.875
PK18009.1
M01158_2.00
Cannabis sativa
NNACACGTGN

NCACGTGTNN
PBM
Lambert et al.(2019)
pTH10272
0.807 0.854
ABF4
M01057_2.00
Arabidopsis thaliana
NDMYAVNWNN

NNWNBTRKHN
PBM
Sullivan et al.(2014)
pTH7551
0.828 0.742
ABF4
M09911_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF4_Q2
0.828 0.742
ABF1
M01772_2.00
Arabidopsis thaliana
NNMCACGTGNN

NNCACGTGKNN
PBM
Weirauch et al.(2014)
pTH8837
0.816 0.694
ABF2
M01771_2.00
Arabidopsis thaliana
NNYACGTGTHNNN

NNNDACACGTRNN
PBM
Weirauch et al.(2014)
pTH8103
0.802 0.854
ABF1
M01773_2.00
Arabidopsis thaliana
NMCACGTGKN

NMCACGTGKN
PBM
Weirauch et al.(2014)
pTH8853
0.816 0.694
ABF2
M06755_2.00
Arabidopsis thaliana
NNWNNTGMCACGTSWBMH

DKVWSACGTGKCANNWNN
Dap-seq
OMalley et al.(2016)
ABF2_col_v3a
0.802 0.854
ABF1
M02656_2.00
Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC

GRHCACGTGGCVVVVVVVV
SELEX
Mathelier et al.(2014)
MA0570.1
0.816 0.694
ABF1
M09906_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_01
0.816 0.694
ABF1
M09907_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_02
0.816 0.694
ABF1
M09908_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_03
0.816 0.694
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.005G237400.1 bZIP 326 388
Gorai.005G237400.2 bZIP 308 370
Gorai.005G237400.3 bZIP 326 373
Gorai.005G237400.4 bZIP 295 357

Links

Other bZIP family TFs
Other Gossypium raimondii TFs

257 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Solyc11g044560.1 Solanum lycopersicum Solyc11g044560.1 I 0.850
PGSC0003DMG400022931 Solanum tuberosum PGSC0003DMG400022931 I 0.850
29801.m003176 Ricinus communis 29801.m003176 I 0.848
Ciclev10028435m.g Citrus clementina Ciclev10028435m.g I 0.842
orange1.1g013197m.g Citrus sinensis orange1.1g013197m.g I 0.842
Gorai.013G044500 Gossypium raimondii Gorai.013G044500 I 0.838
mgf014602m Mimulus guttatus mgf014602m I 0.838
mgf007524m Mimulus guttatus mgf007524m I 0.838
MDP0000248567 Malus domestica MDP0000248567 I 0.838
mgf002047m Mimulus guttatus mgf002047m I 0.838
TCM_007074 Theobroma cacao TCM_007074 I 0.838
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I 0.837
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I 0.837
Si030114m.g Setaria italica Si030114m.g I 0.837
Bo7g116570 Brassica oleracea Bo7g116570 I 0.837
Pm021430 Prunus mume Pm021430 I 0.835
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I 0.835
PRUPE_ppa006752mg Prunus persica PRUPE_ppa006752mg I 0.835
OGLUM09G13130 Oryza glumaepatula OGLUM09G13130 I 0.835
ORGLA09G0097200 Oryza glaberrima ORGLA09G0097200 I 0.835
OMERI09G10130 Oryza meridionalis OMERI09G10130 I 0.835
OS09G0456200 Oryza sativa OS09G0456200 I 0.835
BGIOSGA030899 Oryza indica BGIOSGA030899 I 0.835
gene28250-v1.0-hybrid Fragaria vesca gene28250-v1.0-hybrid I 0.835
OPUNC09G11090 Oryza punctata OPUNC09G11090 I 0.835
Pavir.Ba02029 Panicum virgatum Pavir.Ba02029 I 0.834
GSMUA_Achr5G24570_001 Musa acuminata GSMUA_Achr5G24570_001 I 0.834
Gorai.008G024700 Gossypium raimondii Gorai.008G024700 I 0.834
ABF3 Arabidopsis lyrata fgenesh2_kg.7__705__AT4G34000.1 I 0.833
Cagra.1305s0026 Capsella grandiflora Cagra.1305s0026 I 0.833
Carubv10006251m.g Capsella rubella Carubv10006251m.g I 0.833
Bostr.7867s1253 Boechera stricta Bostr.7867s1253 I 0.833
ABF3 Arabidopsis thaliana AT4G34000 D 0.833
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I 0.832
Pavir.Fb01750 Panicum virgatum Pavir.Fb01750 I 0.831
VIT_03s0063g00310 Vitis vinifera VIT_03s0063g00310 I 0.831
evm.TU.supercontig_62.4 Carica papaya evm.TU.supercontig_62.4 I 0.831
Bo3g073080 Brassica oleracea Bo3g073080 I 0.830
Sb04g034190 Sorghum bicolor Sb04g034190 I 0.829
ABF4 Arabidopsis thaliana AT3G19290 D 0.828
Thhalv10025203m.g Eutrema salsugineum Thhalv10025203m.g I 0.828
Bo1g007700 Brassica oleracea Bo1g007700 I 0.828
LPERR09G09170 Leersia perrieri LPERR09G09170 I 0.827
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I 0.827
Pavir.Fa00674 Panicum virgatum Pavir.Fa00674 I 0.826
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I 0.826
Lus10002399.g Linum usitatissimum Lus10002399.g I 0.826
PK18009.1 Cannabis sativa PK18009.1 D 0.826
Pavir.Da01931 Panicum virgatum Pavir.Da01931 I 0.825
Thhalv10020772m.g Eutrema salsugineum Thhalv10020772m.g I 0.825
PGSC0003DMG400006211 Solanum tuberosum PGSC0003DMG400006211 I 0.825
Bo5g115300 Brassica oleracea Bo5g115300 I 0.825
Bra037533 Brassica rapa Bra037533 I 0.825
Bra022409 Brassica rapa Bra022409 I 0.825
Si006889m.g Setaria italica Si006889m.g I 0.825
GRMZM2G033413 Zea mays GRMZM2G033413 I 0.825
Si013904m.g Setaria italica Si013904m.g I 0.825
Cucsa.219780 Cucumis sativus Cucsa.219780 I 0.823
Cla016272 Citrullus lanatus Cla016272 I 0.823
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I 0.822
Pavir.J00256 Panicum virgatum Pavir.J00256 I 0.822
GSMUA_Achr9G27130_001 Musa acuminata GSMUA_Achr9G27130_001 I 0.822
Solyc01g108080.2 Solanum lycopersicum Solyc01g108080.2 I 0.821
PGSC0003DMG400025889 Solanum tuberosum PGSC0003DMG400025889 I 0.821
PK02169.1 Cannabis sativa PK02169.1 I 0.821
Sb07g022965 Sorghum bicolor Sb07g022965 I 0.821
Cagra.4978s0002 Capsella grandiflora Cagra.4978s0002 I 0.820
Carubv10013729m.g Capsella rubella Carubv10013729m.g I 0.820
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I 0.820
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I 0.820
ABF4 Arabidopsis lyrata fgenesh2_kg.3__2145__AT3G19290.1 I 0.820
OB08G24950 Oryza brachyantha OB08G24950 I 0.820
Cucsa.396070 Cucumis sativus Cucsa.396070 I 0.819
Cla022926 Citrullus lanatus Cla022926 I 0.819
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I 0.819
GRMZM2G157722 Zea mays GRMZM2G157722 I 0.818
cassava42743.valid.m1 Manihot esculenta cassava42743.valid.m1 I 0.818
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I 0.818
ABF2 Vitis vinifera VIT_18s0001g10450 I 0.818
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I 0.818
MTR_3g101780 Medicago truncatula MTR_3g101780 I 0.818
cassava42744.valid.m1 Manihot esculenta cassava42744.valid.m1 I 0.818
cassava42745.valid.m1 Manihot esculenta cassava42745.valid.m1 I 0.818
POPTR_0009s10400 Populus trichocarpa POPTR_0009s10400 I 0.818
GRMZM2G478417 Zea mays GRMZM2G478417 I 0.818
Lus10014066.g Linum usitatissimum Lus10014066.g I 0.818
30170.m013868 Ricinus communis 30170.m013868 I 0.817
cassava12275.valid.m1 Manihot esculenta cassava12275.valid.m1 I 0.817
SapurV1A.0878s0160 Salix purpurea SapurV1A.0878s0160 I 0.817
POPTR_0014s02810 Populus trichocarpa POPTR_0014s02810 I 0.817
OLONG_001053 Oryza longistaminata OLONG_001053 I 0.817
cassava42669.valid.m1 Manihot esculenta cassava42669.valid.m1 I 0.817
POPTR_0002s12710 Populus trichocarpa POPTR_0002s12710 I 0.817
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I 0.817
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I 0.817
TCM_033824 Theobroma cacao TCM_033824 I 0.816
Cagra.2481s0016 Capsella grandiflora Cagra.2481s0016 I 0.816
ABF1 Arabidopsis thaliana AT1G49720 D 0.816
Ca_01548 Cicer arietinum Ca_01548 I 0.815
GLYMA06G04353 Glycine max GLYMA06G04353 I 0.815
GLYMA04G04170 Glycine max GLYMA04G04170 I 0.815
OB09G19140 Oryza brachyantha OB09G19140 I 0.814
Eucgr.G01436 Eucalyptus grandis Eucgr.G01436 I 0.814
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I 0.814
BZIP46 Oryza sativa OS06G0211200 I 0.814
OBART02G33770 Oryza barthii OBART02G33770 I 0.814
MLOC_66546 Hordeum vulgare MLOC_66546 I 0.814
ORUFI12G20810 Oryza rufipogon ORUFI12G20810 I 0.814
Lus10027897.g Linum usitatissimum Lus10027897.g I 0.814
BGIOSGA028831 Oryza indica BGIOSGA028831 I 0.813
Solyc04g078840.2 Solanum lycopersicum Solyc04g078840.2 I 0.813
OPUNC08G15700 Oryza punctata OPUNC08G15700 I 0.813
ORGLA08G0211300 Oryza glaberrima ORGLA08G0211300 I 0.813
ORUFI08G19970 Oryza rufipogon ORUFI08G19970 I 0.813
ABF1 Arabidopsis lyrata fgenesh2_kg.1__4055__AT1G49720.1 I 0.813
LPERR08G14740 Leersia perrieri LPERR08G14740 I 0.813
GRMZM2G002075 Zea mays GRMZM2G002075 I 0.812
TRIUR3_26781 Triticum urartu TRIUR3_26781 I 0.812
Thhalv10012271m.g Eutrema salsugineum Thhalv10012271m.g I 0.812
mgf020824m Mimulus guttatus mgf020824m I 0.812
GSMUA_Achr3G07000_001 Musa acuminata GSMUA_Achr3G07000_001 I 0.812
GLYMA07G33600 Glycine max GLYMA07G33600 I 0.811
MDP0000296303 Malus domestica MDP0000296303 I 0.810
Solyc10g050210.1 Solanum lycopersicum Solyc10g050210.1 I 0.810
GSMUA_Achr5G05690_001 Musa acuminata GSMUA_Achr5G05690_001 I 0.810
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I 0.809
Lus10014194.g Linum usitatissimum Lus10014194.g I 0.809
ABI5 Arabidopsis thaliana AT2G36270 D 0.809
Ca_06458 Cicer arietinum Ca_06458 I 0.809
Lus10022720.g Linum usitatissimum Lus10022720.g I 0.809
MTR_4g085910 Medicago truncatula MTR_4g085910 I 0.809
29625.m000702 Ricinus communis 29625.m000702 I 0.809
OS08G0471950 Oryza sativa OS08G0471950 D 0.809
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I 0.807
ORGLA02G0292000 Oryza glaberrima ORGLA02G0292000 I 0.807
Bo1g114840 Brassica oleracea Bo1g114840 I 0.807
Carubv10009399m.g Capsella rubella Carubv10009399m.g I 0.807
Sb06g026410 Sorghum bicolor Sb06g026410 I 0.807
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I 0.806
OLONG_000475 Oryza longistaminata OLONG_000475 I 0.806
OBART08G17810 Oryza barthii OBART08G17810 I 0.806
ONIVA08G19830 Oryza nivara ONIVA08G19830 I 0.806
TRIUR3_31111 Triticum urartu TRIUR3_31111 I 0.805
GSMUA_Achr6G04270_001 Musa acuminata GSMUA_Achr6G04270_001 I 0.805
TCM_022574 Theobroma cacao TCM_022574 I 0.804
Bra011485 Brassica rapa Bra011485 I 0.804
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I 0.804
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I 0.804
mgf015092m Mimulus guttatus mgf015092m I 0.804
Si017618m.g Setaria italica Si017618m.g I 0.804
ORUFI02G35260 Oryza rufipogon ORUFI02G35260 I 0.803
BZIP23 Oryza sativa OS02G0766700 I 0.803
OGLUM02G34210 Oryza glumaepatula OGLUM02G34210 I 0.803
BGIOSGA005551 Oryza indica BGIOSGA005551 I 0.803
ONIVA02G33490 Oryza nivara ONIVA02G33490 I 0.803
OMERI02G32150 Oryza meridionalis OMERI02G32150 I 0.803
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I 0.803
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I 0.802
POPTR_0009s16610 Populus trichocarpa POPTR_0009s16610 I 0.802
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I 0.802
Bra040260 Brassica rapa Bra040260 I 0.802
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I 0.802
MDP0000701734 Malus domestica MDP0000701734 I 0.802
Pm005288 Prunus mume Pm005288 I 0.802
Carubv10009177m.g Capsella rubella Carubv10009177m.g I 0.802
SapurV1A.0374s0070 Salix purpurea SapurV1A.0374s0070 I 0.802
Bo6g006970 Brassica oleracea Bo6g006970 I 0.802
ABF2 Arabidopsis thaliana AT1G45249 D 0.802
cassava16074.m1 Manihot esculenta cassava16074.m1 I 0.801
Bra018800 Brassica rapa Bra018800 I 0.800
30055.m001548 Ricinus communis 30055.m001548 I 0.800
Bo6g018480 Brassica oleracea Bo6g018480 I 0.800
Bostr.26675s0197 Boechera stricta Bostr.26675s0197 I 0.799
Sb08g003760 Sorghum bicolor Sb08g003760 I 0.799
BRADI4G32090 Brachypodium distachyon BRADI4G32090 I 0.798
Aquca_007_00660 Aquilegia coerulea Aquca_007_00660 I 0.797
BGIOSGA022536 Oryza indica BGIOSGA022536 I 0.796
OMERI06G08210 Oryza meridionalis OMERI06G08210 I 0.796
OPUNC06G06690 Oryza punctata OPUNC06G06690 I 0.796
ONIVA06G08350 Oryza nivara ONIVA06G08350 I 0.796
BGIOSGA040605 Oryza indica BGIOSGA040605 I 0.796
OGLUM06G07500 Oryza glumaepatula OGLUM06G07500 I 0.796
OBART06G07070 Oryza barthii OBART06G07070 I 0.796
ORGLA06G0066000 Oryza glaberrima ORGLA06G0066000 I 0.796
Pm001315 Prunus mume Pm001315 I 0.796
LPERR06G06440 Leersia perrieri LPERR06G06440 I 0.796
OB06G16510 Oryza brachyantha OB06G16510 I 0.796
GSMUA_Achr3G22710_001 Musa acuminata GSMUA_Achr3G22710_001 I 0.796
Pavir.J35078 Panicum virgatum Pavir.J35078 I 0.795
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I 0.795
LPERR01G32620 Leersia perrieri LPERR01G32620 I 0.795
GRMZM2G168079 Zea mays GRMZM2G168079 I 0.795
OMERI01G34950 Oryza meridionalis OMERI01G34950 I 0.795
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I 0.795
BGIOSGA004837 Oryza indica BGIOSGA004837 I 0.795
OLONG_014546 Oryza longistaminata OLONG_014546 I 0.795
ONIVA04G25730 Oryza nivara ONIVA04G25730 I 0.795
OB02G40680 Oryza brachyantha OB02G40680 I 0.795
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I 0.795
OB01G46760 Oryza brachyantha OB01G46760 I 0.795
OBART01G37980 Oryza barthii OBART01G37980 I 0.795
OS01G0859300 Oryza sativa OS01G0859300 I 0.795
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I 0.793
MLOC_34679 Hordeum vulgare MLOC_34679 I 0.793
GSMUA_Achr8G07740_001 Musa acuminata GSMUA_Achr8G07740_001 I 0.793
F775_32479 Aegilops tauschii F775_32479 I 0.793
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I 0.793
TRAES3BF099600130CFD_g Triticum aestivum TRAES3BF099600130CFD_g I 0.793
Lus10017049.g Linum usitatissimum Lus10017049.g I 0.792
Sb03g040510 Sorghum bicolor Sb03g040510 I 0.792
Lus10021369.g Linum usitatissimum Lus10021369.g I 0.792
Eucgr.I01145 Eucalyptus grandis Eucgr.I01145 I 0.791
Cla017970 Citrullus lanatus Cla017970 I 0.791
Lus10009755.g Linum usitatissimum Lus10009755.g I 0.790
ABI5 Populus trichocarpa POPTR_0006s08300 I 0.790
GLYMA10G08370 Glycine max GLYMA10G08370 I 0.790
Pavir.J05659 Panicum virgatum Pavir.J05659 I 0.790
mgf002176m Mimulus guttatus mgf002176m I 0.790
cassava11518.m1 Manihot esculenta cassava11518.m1 I 0.790
cassava32856.m1 Manihot esculenta cassava32856.m1 I 0.790
GLYMA13G22061 Glycine max GLYMA13G22061 I 0.790
TRIUR3_29638 Triticum urartu TRIUR3_29638 I 0.789
TRAES3BF111600160CFD_g Triticum aestivum TRAES3BF111600160CFD_g I 0.789
Si001731m.g Setaria italica Si001731m.g I 0.788
Cucsa.385090 Cucumis sativus Cucsa.385090 I 0.788
Lus10006489.g Linum usitatissimum Lus10006489.g I 0.788
Sb10g007090 Sorghum bicolor Sb10g007090 I 0.788
DPBF2 Vitis vinifera VIT_06s0080g00340 I 0.788
Traes_7DS_C6A3C10A6 Triticum aestivum Traes_7DS_C6A3C10A6 N 0.787
Pavir.Ea03718 Panicum virgatum Pavir.Ea03718 I 0.787
GRMZM5G858197 Zea mays GRMZM5G858197 I 0.787
Pavir.J31353 Panicum virgatum Pavir.J31353 I 0.787
Si003247m.g Setaria italica Si003247m.g I 0.787
Sb03g040970 Sorghum bicolor Sb03g040970 I 0.787
TRIUR3_23754 Triticum urartu TRIUR3_23754 N 0.787
MLOC_20326 Hordeum vulgare MLOC_20326 N 0.787
MLOC_53580 Hordeum vulgare MLOC_53580 N 0.786
Bostr.12302s0127 Boechera stricta Bostr.12302s0127 I 0.786
Traes_6AL_E8CD2C02B Triticum aestivum Traes_6AL_E8CD2C02B N 0.786
SELMODRAFT_266892 Selaginella moellendorffii SELMODRAFT_266892 I 0.786
SELMODRAFT_443424 Selaginella moellendorffii SELMODRAFT_443424 I 0.786
SELMODRAFT_94516 Selaginella moellendorffii SELMODRAFT_94516 I 0.784
SELMODRAFT_91900 Selaginella moellendorffii SELMODRAFT_91900 I 0.784
TCM_034992 Theobroma cacao TCM_034992 I 0.784
Gorai.002G240500 Gossypium raimondii Gorai.002G240500 I 0.784
TRIUR3_33995 Triticum urartu TRIUR3_33995 I 0.784
OPUNC05G18710 Oryza punctata OPUNC05G18710 I 0.783
LPERR02G27610 Leersia perrieri LPERR02G27610 I 0.783
Gorai.006G155600 Gossypium raimondii Gorai.006G155600 I 0.783
PGSC0003DMG400002660 Solanum tuberosum PGSC0003DMG400002660 I 0.783
evm.TU.supercontig_5.28 Carica papaya evm.TU.supercontig_5.28 I 0.783
Solyc09g009490.2 Solanum lycopersicum Solyc09g009490.2 I 0.783
Cucsa.241090 Cucumis sativus Cucsa.241090 I 0.783
Aquca_072_00142 Aquilegia coerulea Aquca_072_00142 I 0.783
Gorai.010G045600 Gossypium raimondii Gorai.010G045600 N 0.782
SapurV1A.0001s2050 Salix purpurea SapurV1A.0001s2050 I 0.782