PGSC0003DMG400022931 (Solanum tuberosum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 PGSC0003DMG400022931 T066515_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ABF3
M01782_2.00
Arabidopsis thaliana
ACACGTGT

ACACGTGT
PBM
Weirauch et al.(2014)
pTH7240
0.839 0.742
ABF3
M09912_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF3_Q2
0.839 0.742
ABF1
M01772_2.00
Arabidopsis thaliana
NNMCACGTGNN

NNCACGTGKNN
PBM
Weirauch et al.(2014)
pTH8837
0.827 0.613
PK18009.1
M01158_2.00
Cannabis sativa
NNACACGTGN

NCACGTGTNN
PBM
Lambert et al.(2019)
pTH10272
0.815 0.667
ABF1
M01773_2.00
Arabidopsis thaliana
NMCACGTGKN

NMCACGTGKN
PBM
Weirauch et al.(2014)
pTH8853
0.827 0.613
ABF1
M02656_2.00
Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC

GRHCACGTGGCVVVVVVVV
SELEX
Mathelier et al.(2014)
MA0570.1
0.827 0.613
ABF1
M09906_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_01
0.827 0.613
ABF1
M09907_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_02
0.827 0.613
ABF1
M09908_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_03
0.827 0.613
ABF4
M01056_2.00
Arabidopsis thaliana
NNMCACGTGKNN

NNMCACGTGKNN
PBM
Sullivan et al.(2014)
pTH7315
0.820 0.597
ABF4
M01057_2.00
Arabidopsis thaliana
NDMYAVNWNN

NNWNBTRKHN
PBM
Sullivan et al.(2014)
pTH7551
0.820 0.597
ABF4
M09911_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF4_Q2
0.820 0.597
ABF2
M01771_2.00
Arabidopsis thaliana
NNYACGTGTHNNN

NNNDACACGTRNN
PBM
Weirauch et al.(2014)
pTH8103
0.808 0.629
ABF2
M06755_2.00
Arabidopsis thaliana
NNWNNTGMCACGTSWBMH

DKVWSACGTGKCANNWNN
Dap-seq
OMalley et al.(2016)
ABF2_col_v3a
0.808 0.629
OS08G0471950
M10047_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TRAB1_Q2
0.798 0.649
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400059037 bZIP 286 311
PGSC0003DMT400059038 bZIP 286 343
PGSC0003DMT400059039 bZIP 286 348
PGSC0003DMT400059040 bZIP 286 348

Links

Other bZIP family TFs
Other Solanum tuberosum TFs

223 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Solyc11g044560.1 Solanum lycopersicum Solyc11g044560.1 I 0.877
Ciclev10028435m.g Citrus clementina Ciclev10028435m.g I 0.858
orange1.1g013197m.g Citrus sinensis orange1.1g013197m.g I 0.858
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I 0.850
Pavir.J00256 Panicum virgatum Pavir.J00256 I 0.840
Carubv10006251m.g Capsella rubella Carubv10006251m.g I 0.839
ABF3 Arabidopsis lyrata fgenesh2_kg.7__705__AT4G34000.1 I 0.839
ABF3 Arabidopsis thaliana AT4G34000 D 0.839
Bostr.7867s1253 Boechera stricta Bostr.7867s1253 I 0.839
LPERR09G09170 Leersia perrieri LPERR09G09170 I 0.839
Cagra.1305s0026 Capsella grandiflora Cagra.1305s0026 I 0.839
Sb04g034190 Sorghum bicolor Sb04g034190 I 0.838
Bo1g007700 Brassica oleracea Bo1g007700 I 0.838
OMERI09G10130 Oryza meridionalis OMERI09G10130 I 0.837
ORGLA09G0097200 Oryza glaberrima ORGLA09G0097200 I 0.837
BGIOSGA030899 Oryza indica BGIOSGA030899 I 0.837
OS09G0456200 Oryza sativa OS09G0456200 I 0.837
OGLUM09G13130 Oryza glumaepatula OGLUM09G13130 I 0.837
OPUNC09G11090 Oryza punctata OPUNC09G11090 I 0.837
PGSC0003DMG400006211 Solanum tuberosum PGSC0003DMG400006211 I 0.834
Si030114m.g Setaria italica Si030114m.g I 0.834
Bo7g116570 Brassica oleracea Bo7g116570 I 0.834
29801.m003176 Ricinus communis 29801.m003176 I 0.833
Bo5g115300 Brassica oleracea Bo5g115300 I 0.830
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I 0.830
Thhalv10020772m.g Eutrema salsugineum Thhalv10020772m.g I 0.830
Bra022409 Brassica rapa Bra022409 I 0.830
Bra037533 Brassica rapa Bra037533 I 0.830
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I 0.830
PGSC0003DMG400025889 Solanum tuberosum PGSC0003DMG400025889 I 0.829
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I 0.829
PK02169.1 Cannabis sativa PK02169.1 I 0.829
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I 0.829
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I 0.829
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I 0.829
Solyc01g108080.2 Solanum lycopersicum Solyc01g108080.2 I 0.829
Lus10002399.g Linum usitatissimum Lus10002399.g I 0.828
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I 0.828
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I 0.828
ABF1 Arabidopsis thaliana AT1G49720 D 0.827
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I 0.827
cassava42669.valid.m1 Manihot esculenta cassava42669.valid.m1 I 0.827
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I 0.827
MTR_3g101780 Medicago truncatula MTR_3g101780 I 0.827
cassava12275.valid.m1 Manihot esculenta cassava12275.valid.m1 I 0.827
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I 0.827
POPTR_0014s02810 Populus trichocarpa POPTR_0014s02810 I 0.827
30170.m013868 Ricinus communis 30170.m013868 I 0.827
POPTR_0002s12710 Populus trichocarpa POPTR_0002s12710 I 0.827
SapurV1A.0878s0160 Salix purpurea SapurV1A.0878s0160 I 0.827
Gorai.008G024700 Gossypium raimondii Gorai.008G024700 I 0.826
Thhalv10025203m.g Eutrema salsugineum Thhalv10025203m.g I 0.825
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I 0.825
OB08G24950 Oryza brachyantha OB08G24950 I 0.824
GLYMA06G04353 Glycine max GLYMA06G04353 I 0.824
Ca_01548 Cicer arietinum Ca_01548 I 0.824
evm.TU.supercontig_62.4 Carica papaya evm.TU.supercontig_62.4 I 0.824
GLYMA04G04170 Glycine max GLYMA04G04170 I 0.824
GSMUA_Achr3G07000_001 Musa acuminata GSMUA_Achr3G07000_001 I 0.824
ABF2 Vitis vinifera VIT_18s0001g10450 I 0.824
Thhalv10012271m.g Eutrema salsugineum Thhalv10012271m.g I 0.823
VIT_03s0063g00310 Vitis vinifera VIT_03s0063g00310 I 0.823
PK18009.1 Cannabis sativa PK18009.1 D 0.823
ABF1 Arabidopsis lyrata fgenesh2_kg.1__4055__AT1G49720.1 I 0.823
Pm021430 Prunus mume Pm021430 I 0.822
mgf020824m Mimulus guttatus mgf020824m I 0.822
Si017618m.g Setaria italica Si017618m.g I 0.822
Pavir.Fa00674 Panicum virgatum Pavir.Fa00674 I 0.822
gene28250-v1.0-hybrid Fragaria vesca gene28250-v1.0-hybrid I 0.822
PRUPE_ppa006752mg Prunus persica PRUPE_ppa006752mg I 0.822
Si013904m.g Setaria italica Si013904m.g I 0.821
ABF4 Arabidopsis lyrata fgenesh2_kg.3__2145__AT3G19290.1 I 0.820
TCM_007074 Theobroma cacao TCM_007074 I 0.820
Cagra.4978s0002 Capsella grandiflora Cagra.4978s0002 I 0.820
Carubv10013729m.g Capsella rubella Carubv10013729m.g I 0.820
Gorai.013G044500 Gossypium raimondii Gorai.013G044500 I 0.820
Cagra.2481s0016 Capsella grandiflora Cagra.2481s0016 I 0.820
GSMUA_Achr9G27130_001 Musa acuminata GSMUA_Achr9G27130_001 I 0.820
MDP0000248567 Malus domestica MDP0000248567 I 0.820
mgf007524m Mimulus guttatus mgf007524m I 0.820
mgf002047m Mimulus guttatus mgf002047m I 0.820
mgf014602m Mimulus guttatus mgf014602m I 0.820
ABF4 Arabidopsis thaliana AT3G19290 D 0.820
Pavir.Ba02029 Panicum virgatum Pavir.Ba02029 I 0.819
GSMUA_Achr5G24570_001 Musa acuminata GSMUA_Achr5G24570_001 I 0.819
Bo3g073080 Brassica oleracea Bo3g073080 I 0.819
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I 0.819
Solyc10g050210.1 Solanum lycopersicum Solyc10g050210.1 I 0.818
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I 0.818
Pavir.Fb01750 Panicum virgatum Pavir.Fb01750 I 0.817
GRMZM2G002075 Zea mays GRMZM2G002075 I 0.816
OLONG_001053 Oryza longistaminata OLONG_001053 I 0.816
POPTR_0009s10400 Populus trichocarpa POPTR_0009s10400 I 0.815
cassava42745.valid.m1 Manihot esculenta cassava42745.valid.m1 I 0.814
cassava42744.valid.m1 Manihot esculenta cassava42744.valid.m1 I 0.814
cassava42743.valid.m1 Manihot esculenta cassava42743.valid.m1 I 0.814
Ca_06458 Cicer arietinum Ca_06458 I 0.814
GLYMA07G33600 Glycine max GLYMA07G33600 I 0.814
MTR_4g085910 Medicago truncatula MTR_4g085910 I 0.814
Eucgr.G01436 Eucalyptus grandis Eucgr.G01436 I 0.813
Cla016272 Citrullus lanatus Cla016272 I 0.813
OB09G19140 Oryza brachyantha OB09G19140 I 0.813
Cucsa.219780 Cucumis sativus Cucsa.219780 I 0.813
Lus10027897.g Linum usitatissimum Lus10027897.g I 0.812
Bo1g114840 Brassica oleracea Bo1g114840 I 0.812
GRMZM2G033413 Zea mays GRMZM2G033413 I 0.812
Pavir.Da01931 Panicum virgatum Pavir.Da01931 I 0.812
Si006889m.g Setaria italica Si006889m.g I 0.812
TRIUR3_26781 Triticum urartu TRIUR3_26781 I 0.812
MLOC_66546 Hordeum vulgare MLOC_66546 I 0.811
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I 0.810
Lus10014066.g Linum usitatissimum Lus10014066.g I 0.810
ONIVA04G25730 Oryza nivara ONIVA04G25730 I 0.810
OBART01G37980 Oryza barthii OBART01G37980 I 0.810
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I 0.810
Sb07g022965 Sorghum bicolor Sb07g022965 I 0.809
ABF2 Arabidopsis thaliana AT1G45249 D 0.808
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I 0.808
Bo6g006970 Brassica oleracea Bo6g006970 I 0.808
TRIUR3_31111 Triticum urartu TRIUR3_31111 I 0.808
Bra040260 Brassica rapa Bra040260 I 0.808
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I 0.808
MDP0000296303 Malus domestica MDP0000296303 I 0.808
Lus10022720.g Linum usitatissimum Lus10022720.g I 0.807
29625.m000702 Ricinus communis 29625.m000702 I 0.807
GSMUA_Achr5G05690_001 Musa acuminata GSMUA_Achr5G05690_001 I 0.807
Lus10014194.g Linum usitatissimum Lus10014194.g I 0.807
TCM_033824 Theobroma cacao TCM_033824 I 0.806
GRMZM2G478417 Zea mays GRMZM2G478417 I 0.806
Solyc04g078840.2 Solanum lycopersicum Solyc04g078840.2 I 0.806
GRMZM2G157722 Zea mays GRMZM2G157722 I 0.806
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I 0.804
ORGLA02G0292000 Oryza glaberrima ORGLA02G0292000 I 0.804
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I 0.804
Bra011485 Brassica rapa Bra011485 I 0.803
LPERR08G14740 Leersia perrieri LPERR08G14740 I 0.802
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I 0.802
Carubv10009399m.g Capsella rubella Carubv10009399m.g I 0.802
BGIOSGA028831 Oryza indica BGIOSGA028831 I 0.802
Bra018800 Brassica rapa Bra018800 I 0.802
ORGLA08G0211300 Oryza glaberrima ORGLA08G0211300 I 0.802
ORUFI08G19970 Oryza rufipogon ORUFI08G19970 I 0.802
ORUFI12G20810 Oryza rufipogon ORUFI12G20810 I 0.802
Bo6g018480 Brassica oleracea Bo6g018480 I 0.802
OPUNC08G15700 Oryza punctata OPUNC08G15700 I 0.802
BZIP46 Oryza sativa OS06G0211200 I 0.802
OLONG_000475 Oryza longistaminata OLONG_000475 I 0.801
GSMUA_Achr6G04270_001 Musa acuminata GSMUA_Achr6G04270_001 I 0.801
Cla022926 Citrullus lanatus Cla022926 I 0.801
ONIVA08G19830 Oryza nivara ONIVA08G19830 I 0.801
OBART08G17810 Oryza barthii OBART08G17810 I 0.801
Cucsa.396070 Cucumis sativus Cucsa.396070 I 0.801
Bostr.26675s0197 Boechera stricta Bostr.26675s0197 I 0.800
Sb06g026410 Sorghum bicolor Sb06g026410 I 0.800
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I 0.800
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I 0.800
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I 0.800
TRAES3BF099600130CFD_g Triticum aestivum TRAES3BF099600130CFD_g I 0.799
Carubv10009177m.g Capsella rubella Carubv10009177m.g I 0.799
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I 0.799
ORUFI02G35260 Oryza rufipogon ORUFI02G35260 I 0.799
OMERI02G32150 Oryza meridionalis OMERI02G32150 I 0.799
BZIP23 Oryza sativa OS02G0766700 I 0.799
OGLUM02G34210 Oryza glumaepatula OGLUM02G34210 I 0.799
BGIOSGA005551 Oryza indica BGIOSGA005551 I 0.799
Eucgr.I01145 Eucalyptus grandis Eucgr.I01145 I 0.799
Pm005288 Prunus mume Pm005288 I 0.799
ONIVA02G33490 Oryza nivara ONIVA02G33490 I 0.799
MDP0000701734 Malus domestica MDP0000701734 I 0.799
OS01G0859300 Oryza sativa OS01G0859300 I 0.798
OLONG_014546 Oryza longistaminata OLONG_014546 I 0.798
LPERR01G32620 Leersia perrieri LPERR01G32620 I 0.798
BGIOSGA004837 Oryza indica BGIOSGA004837 I 0.798
OB01G46760 Oryza brachyantha OB01G46760 I 0.798
OBART02G33770 Oryza barthii OBART02G33770 I 0.798
OS08G0471950 Oryza sativa OS08G0471950 D 0.798
OMERI01G34950 Oryza meridionalis OMERI01G34950 I 0.798
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I 0.798
GSMUA_Achr3G22710_001 Musa acuminata GSMUA_Achr3G22710_001 I 0.797
GRMZM2G168079 Zea mays GRMZM2G168079 I 0.797
Pavir.J35078 Panicum virgatum Pavir.J35078 I 0.797
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I 0.796
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I 0.796
GSMUA_Achr8G07740_001 Musa acuminata GSMUA_Achr8G07740_001 I 0.796
BRADI4G32090 Brachypodium distachyon BRADI4G32090 I 0.796
F775_32479 Aegilops tauschii F775_32479 I 0.796
MLOC_34679 Hordeum vulgare MLOC_34679 I 0.796
Pm001315 Prunus mume Pm001315 I 0.795
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I 0.795
ABI5 Arabidopsis thaliana AT2G36270 D 0.795
mgf015092m Mimulus guttatus mgf015092m I 0.792
TRAES3BF111600160CFD_g Triticum aestivum TRAES3BF111600160CFD_g I 0.792
OB02G40680 Oryza brachyantha OB02G40680 I 0.791
TCM_022574 Theobroma cacao TCM_022574 I 0.790
Sb08g003760 Sorghum bicolor Sb08g003760 I 0.790
Aquca_007_00660 Aquilegia coerulea Aquca_007_00660 I 0.789
GLYMA13G22061 Glycine max GLYMA13G22061 I 0.788
GLYMA10G08370 Glycine max GLYMA10G08370 I 0.788
Lus10017049.g Linum usitatissimum Lus10017049.g I 0.788
ABI5 Populus trichocarpa POPTR_0006s08300 I 0.788
Lus10021369.g Linum usitatissimum Lus10021369.g I 0.788
Lus10009755.g Linum usitatissimum Lus10009755.g I 0.787
cassava11518.m1 Manihot esculenta cassava11518.m1 I 0.787
cassava32856.m1 Manihot esculenta cassava32856.m1 I 0.787
mgf002176m Mimulus guttatus mgf002176m I 0.786
TRIUR3_33995 Triticum urartu TRIUR3_33995 I 0.786
POPTR_0009s16610 Populus trichocarpa POPTR_0009s16610 I 0.785
SapurV1A.0374s0070 Salix purpurea SapurV1A.0374s0070 I 0.785
cassava16074.m1 Manihot esculenta cassava16074.m1 I 0.785
30055.m001548 Ricinus communis 30055.m001548 I 0.785
SELMODRAFT_443424 Selaginella moellendorffii SELMODRAFT_443424 I 0.785
Si001731m.g Setaria italica Si001731m.g I 0.784
Bostr.12302s0127 Boechera stricta Bostr.12302s0127 I 0.784
SELMODRAFT_266892 Selaginella moellendorffii SELMODRAFT_266892 I 0.784
Sb03g040510 Sorghum bicolor Sb03g040510 I 0.784
MLOC_53580 Hordeum vulgare MLOC_53580 N 0.783
Sb10g007090 Sorghum bicolor Sb10g007090 I 0.783
Traes_6AL_E8CD2C02B Triticum aestivum Traes_6AL_E8CD2C02B N 0.783
Aquca_072_00142 Aquilegia coerulea Aquca_072_00142 I 0.782
OPUNC01G36800 Oryza punctata OPUNC01G36800 I 0.782
Cucsa.385090 Cucumis sativus Cucsa.385090 I 0.782
TRIUR3_29638 Triticum urartu TRIUR3_29638 I 0.782