Ciclev10028435m.g (Citrus clementina)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Ciclev10028435m.g T071651_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ABF3
M01782_2.00
Arabidopsis thaliana
ACACGTGT

ACACGTGT
PBM
Weirauch et al.(2014)
pTH7240
0.815 0.766
ABF3
M09912_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF3_Q2
0.815 0.766
PK18009.1
M01158_2.00
Cannabis sativa
NNACACGTGN

NCACGTGTNN
PBM
Lambert et al.(2019)
pTH10272
0.807 0.872
ABF4
M01056_2.00
Arabidopsis thaliana
NNMCACGTGKNN

NNMCACGTGKNN
PBM
Sullivan et al.(2014)
pTH7315
0.802 0.830
ABF2
M01771_2.00
Arabidopsis thaliana
NNYACGTGTHNNN

NNNDACACGTRNN
PBM
Weirauch et al.(2014)
pTH8103
0.804 0.661
ABF2
M06755_2.00
Arabidopsis thaliana
NNWNNTGMCACGTSWBMH

DKVWSACGTGKCANNWNN
Dap-seq
OMalley et al.(2016)
ABF2_col_v3a
0.804 0.661
ABF4
M01057_2.00
Arabidopsis thaliana
NDMYAVNWNN

NNWNBTRKHN
PBM
Sullivan et al.(2014)
pTH7551
0.802 0.830
ABF4
M09911_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF4_Q2
0.809 0.613
OS08G0471950
M10047_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TRAB1_Q2
0.801 0.644
ABF1
M01772_2.00
Arabidopsis thaliana
NNMCACGTGNN

NNCACGTGKNN
PBM
Weirauch et al.(2014)
pTH8837
0.809 0.613
ABF1
M01773_2.00
Arabidopsis thaliana
NMCACGTGKN

NMCACGTGKN
PBM
Weirauch et al.(2014)
pTH8853
0.809 0.613
ABF1
M02656_2.00
Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC

GRHCACGTGGCVVVVVVVV
SELEX
Mathelier et al.(2014)
MA0570.1
0.809 0.613
ABF1
M09906_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_01
0.809 0.613
ABF1
M09907_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_02
0.809 0.613
ABF1
M09908_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_03
0.809 0.613
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10028435m bZIP 367 431
Ciclev10028438m bZIP 367 430
Ciclev10028442m bZIP 367 430
Ciclev10028447m bZIP 367 430
Ciclev10028510m bZIP 367 413
Ciclev10028523m bZIP 367 413
Ciclev10028525m bZIP 367 413

Links

Other bZIP family TFs
Other Citrus clementina TFs

242 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
orange1.1g013197m.g Citrus sinensis orange1.1g013197m.g I 0.877
Solyc11g044560.1 Solanum lycopersicum Solyc11g044560.1 I 0.858
PGSC0003DMG400022931 Solanum tuberosum PGSC0003DMG400022931 I 0.858
LPERR09G09170 Leersia perrieri LPERR09G09170 I 0.852
BGIOSGA030899 Oryza indica BGIOSGA030899 I 0.847
OPUNC09G11090 Oryza punctata OPUNC09G11090 I 0.847
OGLUM09G13130 Oryza glumaepatula OGLUM09G13130 I 0.847
OMERI09G10130 Oryza meridionalis OMERI09G10130 I 0.847
ORGLA09G0097200 Oryza glaberrima ORGLA09G0097200 I 0.847
OS09G0456200 Oryza sativa OS09G0456200 I 0.847
Lus10002399.g Linum usitatissimum Lus10002399.g I 0.842
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I 0.842
PK02169.1 Cannabis sativa PK02169.1 I 0.840
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I 0.838
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I 0.838
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I 0.837
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I 0.837
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I 0.837
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I 0.836
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I 0.836
POPTR_0002s12710 Populus trichocarpa POPTR_0002s12710 I 0.835
POPTR_0014s02810 Populus trichocarpa POPTR_0014s02810 I 0.835
cassava12275.valid.m1 Manihot esculenta cassava12275.valid.m1 I 0.835
30170.m013868 Ricinus communis 30170.m013868 I 0.835
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I 0.835
Pavir.Fa00674 Panicum virgatum Pavir.Fa00674 I 0.835
cassava42669.valid.m1 Manihot esculenta cassava42669.valid.m1 I 0.835
MTR_3g101780 Medicago truncatula MTR_3g101780 I 0.835
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I 0.835
SapurV1A.0878s0160 Salix purpurea SapurV1A.0878s0160 I 0.835
ABF2 Vitis vinifera VIT_18s0001g10450 I 0.835
Si013904m.g Setaria italica Si013904m.g I 0.834
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I 0.834
Pm021430 Prunus mume Pm021430 I 0.833
GSMUA_Achr9G27130_001 Musa acuminata GSMUA_Achr9G27130_001 I 0.833
Ca_01548 Cicer arietinum Ca_01548 I 0.833
PRUPE_ppa006752mg Prunus persica PRUPE_ppa006752mg I 0.833
gene28250-v1.0-hybrid Fragaria vesca gene28250-v1.0-hybrid I 0.833
Pavir.J00256 Panicum virgatum Pavir.J00256 I 0.833
GLYMA06G04353 Glycine max GLYMA06G04353 I 0.833
GLYMA04G04170 Glycine max GLYMA04G04170 I 0.833
Cagra.1305s0026 Capsella grandiflora Cagra.1305s0026 I 0.832
ABF3 Arabidopsis thaliana AT4G34000 D 0.832
Carubv10006251m.g Capsella rubella Carubv10006251m.g I 0.832
ABF3 Arabidopsis lyrata fgenesh2_kg.7__705__AT4G34000.1 I 0.832
Bostr.7867s1253 Boechera stricta Bostr.7867s1253 I 0.832
mgf007524m Mimulus guttatus mgf007524m I 0.831
mgf014602m Mimulus guttatus mgf014602m I 0.831
mgf002047m Mimulus guttatus mgf002047m I 0.831
Bra018800 Brassica rapa Bra018800 I 0.830
Bostr.26675s0197 Boechera stricta Bostr.26675s0197 I 0.829
Carubv10009399m.g Capsella rubella Carubv10009399m.g I 0.829
Sb04g034190 Sorghum bicolor Sb04g034190 I 0.828
OBART08G17810 Oryza barthii OBART08G17810 I 0.828
ONIVA08G19830 Oryza nivara ONIVA08G19830 I 0.828
Bo1g007700 Brassica oleracea Bo1g007700 I 0.828
OLONG_000475 Oryza longistaminata OLONG_000475 I 0.828
Si030114m.g Setaria italica Si030114m.g I 0.828
GRMZM2G157722 Zea mays GRMZM2G157722 I 0.828
TRIUR3_26781 Triticum urartu TRIUR3_26781 I 0.827
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I 0.827
GRMZM2G002075 Zea mays GRMZM2G002075 I 0.827
OB08G24950 Oryza brachyantha OB08G24950 I 0.826
Carubv10013729m.g Capsella rubella Carubv10013729m.g I 0.826
ABF4 Arabidopsis thaliana AT3G19290 D 0.826
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I 0.824
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I 0.824
Cla016272 Citrullus lanatus Cla016272 I 0.824
Cucsa.219780 Cucumis sativus Cucsa.219780 I 0.824
Bo7g116570 Brassica oleracea Bo7g116570 I 0.824
Pavir.Ba02029 Panicum virgatum Pavir.Ba02029 I 0.823
GSMUA_Achr3G07000_001 Musa acuminata GSMUA_Achr3G07000_001 I 0.823
29801.m003176 Ricinus communis 29801.m003176 I 0.823
Gorai.008G024700 Gossypium raimondii Gorai.008G024700 I 0.821
Pavir.Fb01750 Panicum virgatum Pavir.Fb01750 I 0.820
mgf020824m Mimulus guttatus mgf020824m I 0.820
Sb07g022965 Sorghum bicolor Sb07g022965 I 0.820
OB09G19140 Oryza brachyantha OB09G19140 I 0.820
POPTR_0009s10400 Populus trichocarpa POPTR_0009s10400 I 0.819
Lus10027897.g Linum usitatissimum Lus10027897.g I 0.819
PGSC0003DMG400006211 Solanum tuberosum PGSC0003DMG400006211 I 0.819
MLOC_66546 Hordeum vulgare MLOC_66546 I 0.819
Eucgr.G01436 Eucalyptus grandis Eucgr.G01436 I 0.819
cassava42744.valid.m1 Manihot esculenta cassava42744.valid.m1 I 0.818
cassava42743.valid.m1 Manihot esculenta cassava42743.valid.m1 I 0.818
cassava42745.valid.m1 Manihot esculenta cassava42745.valid.m1 I 0.818
evm.TU.supercontig_62.4 Carica papaya evm.TU.supercontig_62.4 I 0.818
ORGLA02G0292000 Oryza glaberrima ORGLA02G0292000 I 0.817
MDP0000248567 Malus domestica MDP0000248567 I 0.817
TCM_007074 Theobroma cacao TCM_007074 I 0.817
Gorai.013G044500 Gossypium raimondii Gorai.013G044500 I 0.817
GLYMA07G33600 Glycine max GLYMA07G33600 I 0.817
GRMZM2G478417 Zea mays GRMZM2G478417 I 0.817
VIT_03s0063g00310 Vitis vinifera VIT_03s0063g00310 I 0.816
Aquca_007_00660 Aquilegia coerulea Aquca_007_00660 I 0.816
GSMUA_Achr5G24570_001 Musa acuminata GSMUA_Achr5G24570_001 I 0.816
Solyc04g078840.2 Solanum lycopersicum Solyc04g078840.2 I 0.815
Bra022409 Brassica rapa Bra022409 I 0.815
Bra037533 Brassica rapa Bra037533 I 0.815
Thhalv10020772m.g Eutrema salsugineum Thhalv10020772m.g I 0.815
Thhalv10025203m.g Eutrema salsugineum Thhalv10025203m.g I 0.815
Bo5g115300 Brassica oleracea Bo5g115300 I 0.815
Ca_06458 Cicer arietinum Ca_06458 I 0.814
TCM_033824 Theobroma cacao TCM_033824 I 0.814
MTR_4g085910 Medicago truncatula MTR_4g085910 I 0.814
PGSC0003DMG400025889 Solanum tuberosum PGSC0003DMG400025889 I 0.813
Bo3g073080 Brassica oleracea Bo3g073080 I 0.813
Cagra.2481s0016 Capsella grandiflora Cagra.2481s0016 I 0.813
Solyc01g108080.2 Solanum lycopersicum Solyc01g108080.2 I 0.813
OMERI02G32150 Oryza meridionalis OMERI02G32150 I 0.812
OGLUM02G34210 Oryza glumaepatula OGLUM02G34210 I 0.812
Lus10014066.g Linum usitatissimum Lus10014066.g I 0.812
GSMUA_Achr5G05690_001 Musa acuminata GSMUA_Achr5G05690_001 I 0.812
ONIVA02G33490 Oryza nivara ONIVA02G33490 I 0.812
BGIOSGA005551 Oryza indica BGIOSGA005551 I 0.812
ORUFI02G35260 Oryza rufipogon ORUFI02G35260 I 0.812
PK18009.1 Cannabis sativa PK18009.1 D 0.812
SELMODRAFT_443424 Selaginella moellendorffii SELMODRAFT_443424 I 0.812
Bo1g114840 Brassica oleracea Bo1g114840 I 0.812
BZIP23 Oryza sativa OS02G0766700 I 0.812
OLONG_001053 Oryza longistaminata OLONG_001053 I 0.811
Bo6g018480 Brassica oleracea Bo6g018480 I 0.810
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I 0.809
ABF1 Arabidopsis thaliana AT1G49720 D 0.809
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I 0.809
ABF4 Arabidopsis lyrata fgenesh2_kg.3__2145__AT3G19290.1 I 0.809
Cagra.4978s0002 Capsella grandiflora Cagra.4978s0002 I 0.809
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I 0.807
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I 0.807
GSMUA_Achr6G04270_001 Musa acuminata GSMUA_Achr6G04270_001 I 0.807
OBART01G37980 Oryza barthii OBART01G37980 I 0.807
ONIVA04G25730 Oryza nivara ONIVA04G25730 I 0.807
Bo6g006970 Brassica oleracea Bo6g006970 I 0.806
ABF2 Arabidopsis thaliana AT1G45249 D 0.806
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I 0.806
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I 0.806
Bra040260 Brassica rapa Bra040260 I 0.806
ABF1 Arabidopsis lyrata fgenesh2_kg.1__4055__AT1G49720.1 I 0.806
TRIUR3_29638 Triticum urartu TRIUR3_29638 I 0.805
MDP0000296303 Malus domestica MDP0000296303 I 0.805
Thhalv10012271m.g Eutrema salsugineum Thhalv10012271m.g I 0.805
Sb06g026410 Sorghum bicolor Sb06g026410 I 0.805
OGLUM06G07500 Oryza glumaepatula OGLUM06G07500 I 0.805
OBART06G07070 Oryza barthii OBART06G07070 I 0.805
OMERI06G08210 Oryza meridionalis OMERI06G08210 I 0.805
ONIVA06G08350 Oryza nivara ONIVA06G08350 I 0.805
ORGLA06G0066000 Oryza glaberrima ORGLA06G0066000 I 0.805
OPUNC06G06690 Oryza punctata OPUNC06G06690 I 0.805
LPERR06G06440 Leersia perrieri LPERR06G06440 I 0.805
OB06G16510 Oryza brachyantha OB06G16510 I 0.805
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I 0.805
BGIOSGA040605 Oryza indica BGIOSGA040605 I 0.805
BGIOSGA022536 Oryza indica BGIOSGA022536 I 0.805
GLYMA02G14880 Glycine max GLYMA02G14880 N 0.805
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I 0.804
Carubv10009177m.g Capsella rubella Carubv10009177m.g I 0.804
Si017618m.g Setaria italica Si017618m.g I 0.804
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I 0.804
MDP0000701734 Malus domestica MDP0000701734 I 0.804
ORGLA08G0211300 Oryza glaberrima ORGLA08G0211300 I 0.803
ORUFI08G19970 Oryza rufipogon ORUFI08G19970 I 0.803
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I 0.803
LPERR08G14740 Leersia perrieri LPERR08G14740 I 0.803
BGIOSGA028831 Oryza indica BGIOSGA028831 I 0.803
OPUNC08G15700 Oryza punctata OPUNC08G15700 I 0.803
Solyc10g050210.1 Solanum lycopersicum Solyc10g050210.1 I 0.803
Pavir.Da01931 Panicum virgatum Pavir.Da01931 I 0.802
OBART02G33770 Oryza barthii OBART02G33770 I 0.802
GRMZM2G033413 Zea mays GRMZM2G033413 I 0.802
BRADI4G32090 Brachypodium distachyon BRADI4G32090 I 0.802
Eucgr.I01145 Eucalyptus grandis Eucgr.I01145 I 0.802
Si006889m.g Setaria italica Si006889m.g I 0.802
OS08G0471950 Oryza sativa OS08G0471950 D 0.802
Bra011485 Brassica rapa Bra011485 I 0.802
TRIUR3_31111 Triticum urartu TRIUR3_31111 I 0.801
Cla022926 Citrullus lanatus Cla022926 I 0.800
Cucsa.396070 Cucumis sativus Cucsa.396070 I 0.800
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I 0.800
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I 0.800
Pm005288 Prunus mume Pm005288 I 0.799
OB02G40680 Oryza brachyantha OB02G40680 I 0.797
Lus10022720.g Linum usitatissimum Lus10022720.g I 0.797
29625.m000702 Ricinus communis 29625.m000702 I 0.797
Lus10014194.g Linum usitatissimum Lus10014194.g I 0.797
BZIP46 Oryza sativa OS06G0211200 I 0.796
ORUFI12G20810 Oryza rufipogon ORUFI12G20810 I 0.796
Lus10017049.g Linum usitatissimum Lus10017049.g I 0.795
ABI5 Arabidopsis thaliana AT2G36270 D 0.794
Sb08g003760 Sorghum bicolor Sb08g003760 I 0.794
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I 0.794
TRAES3BF099600130CFD_g Triticum aestivum TRAES3BF099600130CFD_g I 0.793
Si001731m.g Setaria italica Si001731m.g I 0.792
Sb03g040510 Sorghum bicolor Sb03g040510 I 0.792
OB01G46760 Oryza brachyantha OB01G46760 I 0.791
OLONG_014546 Oryza longistaminata OLONG_014546 I 0.791
GRMZM2G168079 Zea mays GRMZM2G168079 I 0.791
Pavir.J35078 Panicum virgatum Pavir.J35078 I 0.791
BGIOSGA004837 Oryza indica BGIOSGA004837 I 0.791
OMERI01G34950 Oryza meridionalis OMERI01G34950 I 0.791
OS01G0859300 Oryza sativa OS01G0859300 I 0.791
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I 0.791
LPERR01G32620 Leersia perrieri LPERR01G32620 I 0.791
Lus10006489.g Linum usitatissimum Lus10006489.g I 0.790
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I 0.789
F775_32479 Aegilops tauschii F775_32479 I 0.789
MLOC_34679 Hordeum vulgare MLOC_34679 I 0.789
TCM_022574 Theobroma cacao TCM_022574 I 0.789
mgf015092m Mimulus guttatus mgf015092m I 0.789
Bostr.12302s0127 Boechera stricta Bostr.12302s0127 I 0.789
OS03G0322700 Oryza sativa OS03G0322700 I 0.789
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I 0.789
Lus10009755.g Linum usitatissimum Lus10009755.g I 0.788
GSMUA_Achr3G22710_001 Musa acuminata GSMUA_Achr3G22710_001 I 0.788
GLYMA10G08370 Glycine max GLYMA10G08370 I 0.788
ABI5 Populus trichocarpa POPTR_0006s08300 I 0.788
cassava32856.m1 Manihot esculenta cassava32856.m1 I 0.788
Cucsa.385090 Cucumis sativus Cucsa.385090 I 0.788
mgf002176m Mimulus guttatus mgf002176m I 0.788
cassava11518.m1 Manihot esculenta cassava11518.m1 I 0.788
GLYMA13G22061 Glycine max GLYMA13G22061 I 0.788
Lus10021369.g Linum usitatissimum Lus10021369.g I 0.788
SELMODRAFT_266892 Selaginella moellendorffii SELMODRAFT_266892 I 0.788
TRIUR3_23754 Triticum urartu TRIUR3_23754 N 0.786
Sb02g026570 Sorghum bicolor Sb02g026570 N 0.786
Traes_7DS_C6A3C10A6 Triticum aestivum Traes_7DS_C6A3C10A6 N 0.786
MLOC_20326 Hordeum vulgare MLOC_20326 N 0.786
GSMUA_Achr8G07740_001 Musa acuminata GSMUA_Achr8G07740_001 I 0.785
30055.m001548 Ricinus communis 30055.m001548 I 0.785
SELMODRAFT_177659 Selaginella moellendorffii SELMODRAFT_177659 I 0.785
cassava16074.m1 Manihot esculenta cassava16074.m1 I 0.785
TRAES3BF111600160CFD_g Triticum aestivum TRAES3BF111600160CFD_g I 0.785
Traes_6AL_E8CD2C02B Triticum aestivum Traes_6AL_E8CD2C02B N 0.784
DPBF2 Vitis vinifera VIT_06s0080g00340 I 0.784
SapurV1A.0374s0070 Salix purpurea SapurV1A.0374s0070 I 0.784
MLOC_53580 Hordeum vulgare MLOC_53580 N 0.784
LPERR02G27610 Leersia perrieri LPERR02G27610 I 0.784
Traes_5BL_DE53199D3 Triticum aestivum Traes_5BL_DE53199D3 N 0.784
F775_07568 Aegilops tauschii F775_07568 N 0.784
POPTR_0009s16610 Populus trichocarpa POPTR_0009s16610 I 0.784
Pm001315 Prunus mume Pm001315 I 0.783
Sb10g007090 Sorghum bicolor Sb10g007090 I 0.783