PGSC0003DMG400006211 (Solanum tuberosum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 PGSC0003DMG400006211 T066481_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ABF4
M01056_2.00 		Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7315 		0.836 0.703
ABF4
M01057_2.00 		Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN		 PBM
Sullivan et al.(2014)
pTH7551 		0.836 0.703
ABF4
M09911_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF4_Q2 		0.836 0.703
PK18009.1
M01158_2.00 		Cannabis sativa
NNACACGTGN
NCACGTGTNN		 PBM
Lambert et al.(2019)
pTH10272 		0.835 0.750
ABF1
M01772_2.00 		Arabidopsis thaliana
NNMCACGTGNN
NNCACGTGKNN		 PBM
Weirauch et al.(2014)
pTH8837 		0.826 0.656
ABF1
M01773_2.00 		Arabidopsis thaliana
NMCACGTGKN
NMCACGTGKN		 PBM
Weirauch et al.(2014)
pTH8853 		0.826 0.656
ABF1
M02656_2.00 		Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC
GRHCACGTGGCVVVVVVVV		 SELEX
Mathelier et al.(2014)
MA0570.1 		0.826 0.656
ABF1
M09906_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_01 		0.826 0.656
ABF1
M09907_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_02 		0.826 0.656
ABF1
M09908_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_03 		0.826 0.656
ABF3
M01782_2.00 		Arabidopsis thaliana
ACACGTGT
ACACGTGT		 PBM
Weirauch et al.(2014)
pTH7240 		0.817 0.594
ABF3
M09912_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF3_Q2 		0.817 0.594
ABF2
M01771_2.00 		Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN		 PBM
Weirauch et al.(2014)
pTH8103 		0.800 0.734
ABF2
M06755_2.00 		Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN		 Dap-seq
OMalley et al.(2016)
ABF2_col_v3a 		0.800 0.734
OS08G0471950
M10047_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TRAB1_Q2 		0.799 0.625
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400015892 bZIP 331 396

Links

Other bZIP family TFs
Other Solanum tuberosum TFs

224 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400025889 Solanum tuberosum PGSC0003DMG400025889 I 0.865
Solyc01g108080.2 Solanum lycopersicum Solyc01g108080.2 I 0.865
Solyc10g050210.1 Solanum lycopersicum Solyc10g050210.1 I 0.861
Cla016272 Citrullus lanatus Cla016272 I 0.851
Cucsa.219780 Cucumis sativus Cucsa.219780 I 0.851
Bra022409 Brassica rapa Bra022409 I 0.850
Bra037533 Brassica rapa Bra037533 I 0.850
Thhalv10020772m.g Eutrema salsugineum Thhalv10020772m.g I 0.850
Bo5g115300 Brassica oleracea Bo5g115300 I 0.850
Si030114m.g Setaria italica Si030114m.g I 0.850
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I 0.846
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I 0.846
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I 0.845
Lus10014066.g Linum usitatissimum Lus10014066.g I 0.844
Thhalv10025203m.g Eutrema salsugineum Thhalv10025203m.g I 0.842
ABF4 Arabidopsis lyrata fgenesh2_kg.3__2145__AT3G19290.1 I 0.840
Carubv10013729m.g Capsella rubella Carubv10013729m.g I 0.840
Cagra.4978s0002 Capsella grandiflora Cagra.4978s0002 I 0.840
ABF1 Arabidopsis lyrata fgenesh2_kg.1__4055__AT1G49720.1 I 0.839
gene28250-v1.0-hybrid Fragaria vesca gene28250-v1.0-hybrid I 0.838
Thhalv10012271m.g Eutrema salsugineum Thhalv10012271m.g I 0.838
evm.TU.supercontig_62.4 Carica papaya evm.TU.supercontig_62.4 I 0.837
PRUPE_ppa006752mg Prunus persica PRUPE_ppa006752mg I 0.836
Cagra.2481s0016 Capsella grandiflora Cagra.2481s0016 I 0.836
ABF4 Arabidopsis thaliana AT3G19290 D 0.836
Pm021430 Prunus mume Pm021430 I 0.836
PK18009.1 Cannabis sativa PK18009.1 D 0.835
PGSC0003DMG400022931 Solanum tuberosum PGSC0003DMG400022931 I 0.834
Solyc11g044560.1 Solanum lycopersicum Solyc11g044560.1 I 0.834
Pavir.Fa00674 Panicum virgatum Pavir.Fa00674 I 0.833
Si013904m.g Setaria italica Si013904m.g I 0.833
MDP0000248567 Malus domestica MDP0000248567 I 0.832
LPERR09G09170 Leersia perrieri LPERR09G09170 I 0.832
Gorai.013G044500 Gossypium raimondii Gorai.013G044500 I 0.832
mgf007524m Mimulus guttatus mgf007524m I 0.832
mgf014602m Mimulus guttatus mgf014602m I 0.832
mgf002047m Mimulus guttatus mgf002047m I 0.832
TCM_007074 Theobroma cacao TCM_007074 I 0.832
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I 0.831
OB01G46760 Oryza brachyantha OB01G46760 I 0.831
OLONG_014546 Oryza longistaminata OLONG_014546 I 0.831
OBART01G37980 Oryza barthii OBART01G37980 I 0.831
OMERI01G34950 Oryza meridionalis OMERI01G34950 I 0.831
OS01G0859300 Oryza sativa OS01G0859300 I 0.831
POPTR_0009s10400 Populus trichocarpa POPTR_0009s10400 I 0.831
LPERR01G32620 Leersia perrieri LPERR01G32620 I 0.831
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I 0.831
ONIVA04G25730 Oryza nivara ONIVA04G25730 I 0.831
BGIOSGA004837 Oryza indica BGIOSGA004837 I 0.831
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I 0.831
Pavir.J35078 Panicum virgatum Pavir.J35078 I 0.831
GRMZM2G168079 Zea mays GRMZM2G168079 I 0.831
OMERI09G10130 Oryza meridionalis OMERI09G10130 I 0.829
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I 0.829
BGIOSGA030899 Oryza indica BGIOSGA030899 I 0.829
OPUNC09G11090 Oryza punctata OPUNC09G11090 I 0.829
F775_32479 Aegilops tauschii F775_32479 I 0.829
Eucgr.I01145 Eucalyptus grandis Eucgr.I01145 I 0.829
OGLUM09G13130 Oryza glumaepatula OGLUM09G13130 I 0.829
OS09G0456200 Oryza sativa OS09G0456200 I 0.829
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I 0.829
MLOC_34679 Hordeum vulgare MLOC_34679 I 0.829
ORGLA09G0097200 Oryza glaberrima ORGLA09G0097200 I 0.829
cassava42743.valid.m1 Manihot esculenta cassava42743.valid.m1 I 0.826
ABF1 Arabidopsis thaliana AT1G49720 D 0.826
cassava42745.valid.m1 Manihot esculenta cassava42745.valid.m1 I 0.826
cassava42744.valid.m1 Manihot esculenta cassava42744.valid.m1 I 0.826
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I 0.825
GSMUA_Achr9G27130_001 Musa acuminata GSMUA_Achr9G27130_001 I 0.824
Pavir.Ba02029 Panicum virgatum Pavir.Ba02029 I 0.823
Bo3g073080 Brassica oleracea Bo3g073080 I 0.823
Bo1g114840 Brassica oleracea Bo1g114840 I 0.822
Lus10002399.g Linum usitatissimum Lus10002399.g I 0.822
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I 0.821
Si017618m.g Setaria italica Si017618m.g I 0.821
Sb07g022965 Sorghum bicolor Sb07g022965 I 0.821
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I 0.820
SapurV1A.0878s0160 Salix purpurea SapurV1A.0878s0160 I 0.819
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I 0.819
cassava42669.valid.m1 Manihot esculenta cassava42669.valid.m1 I 0.819
cassava12275.valid.m1 Manihot esculenta cassava12275.valid.m1 I 0.819
TRIUR3_33995 Triticum urartu TRIUR3_33995 I 0.819
Ciclev10028435m.g Citrus clementina Ciclev10028435m.g I 0.819
30170.m013868 Ricinus communis 30170.m013868 I 0.819
POPTR_0014s02810 Populus trichocarpa POPTR_0014s02810 I 0.819
POPTR_0002s12710 Populus trichocarpa POPTR_0002s12710 I 0.819
orange1.1g013197m.g Citrus sinensis orange1.1g013197m.g I 0.819
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I 0.819
TCM_033824 Theobroma cacao TCM_033824 I 0.817
GLYMA06G04353 Glycine max GLYMA06G04353 I 0.817
GSMUA_Achr3G07000_001 Musa acuminata GSMUA_Achr3G07000_001 I 0.817
Bostr.7867s1253 Boechera stricta Bostr.7867s1253 I 0.817
Carubv10006251m.g Capsella rubella Carubv10006251m.g I 0.817
Cagra.1305s0026 Capsella grandiflora Cagra.1305s0026 I 0.817
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I 0.817
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I 0.817
ABF3 Arabidopsis lyrata fgenesh2_kg.7__705__AT4G34000.1 I 0.817
Ca_01548 Cicer arietinum Ca_01548 I 0.817
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I 0.817
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I 0.817
ABF2 Vitis vinifera VIT_18s0001g10450 I 0.817
GLYMA04G04170 Glycine max GLYMA04G04170 I 0.817
ABF3 Arabidopsis thaliana AT4G34000 D 0.817
TRIUR3_31111 Triticum urartu TRIUR3_31111 I 0.817
Gorai.008G024700 Gossypium raimondii Gorai.008G024700 I 0.817
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I 0.816
PK02169.1 Cannabis sativa PK02169.1 I 0.816
Pavir.Fb01750 Panicum virgatum Pavir.Fb01750 I 0.816
ORGLA02G0292000 Oryza glaberrima ORGLA02G0292000 I 0.816
OPUNC01G36800 Oryza punctata OPUNC01G36800 I 0.816
MTR_3g101780 Medicago truncatula MTR_3g101780 I 0.815
Lus10027897.g Linum usitatissimum Lus10027897.g I 0.815
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I 0.815
mgf020824m Mimulus guttatus mgf020824m I 0.814
TRAES3BF099600130CFD_g Triticum aestivum TRAES3BF099600130CFD_g I 0.813
GSMUA_Achr8G07740_001 Musa acuminata GSMUA_Achr8G07740_001 I 0.813
GSMUA_Achr3G22710_001 Musa acuminata GSMUA_Achr3G22710_001 I 0.813
OB09G19140 Oryza brachyantha OB09G19140 I 0.812
MLOC_66546 Hordeum vulgare MLOC_66546 I 0.812
OB08G24950 Oryza brachyantha OB08G24950 I 0.812
29801.m003176 Ricinus communis 29801.m003176 I 0.811
BZIP23 Oryza sativa OS02G0766700 I 0.811
ONIVA02G33490 Oryza nivara ONIVA02G33490 I 0.811
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I 0.811
ORUFI02G35260 Oryza rufipogon ORUFI02G35260 I 0.811
BGIOSGA005551 Oryza indica BGIOSGA005551 I 0.811
OGLUM02G34210 Oryza glumaepatula OGLUM02G34210 I 0.811
OMERI02G32150 Oryza meridionalis OMERI02G32150 I 0.811
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I 0.810
GSMUA_Achr5G05690_001 Musa acuminata GSMUA_Achr5G05690_001 I 0.810
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I 0.810
Bo7g116570 Brassica oleracea Bo7g116570 I 0.809
MDP0000296303 Malus domestica MDP0000296303 I 0.809
GRMZM2G002075 Zea mays GRMZM2G002075 I 0.809
VIT_03s0063g00310 Vitis vinifera VIT_03s0063g00310 I 0.809
Cucsa.385090 Cucumis sativus Cucsa.385090 I 0.809
TRAES3BF111600160CFD_g Triticum aestivum TRAES3BF111600160CFD_g I 0.809
Bo1g007700 Brassica oleracea Bo1g007700 I 0.808
OLONG_001053 Oryza longistaminata OLONG_001053 I 0.808
Lus10022720.g Linum usitatissimum Lus10022720.g I 0.807
LPERR08G14740 Leersia perrieri LPERR08G14740 I 0.807
Lus10014194.g Linum usitatissimum Lus10014194.g I 0.807
Cucsa.396070 Cucumis sativus Cucsa.396070 I 0.806
TRIUR3_26781 Triticum urartu TRIUR3_26781 I 0.806
Cla022926 Citrullus lanatus Cla022926 I 0.806
GRMZM2G157722 Zea mays GRMZM2G157722 I 0.806
GRMZM2G478417 Zea mays GRMZM2G478417 I 0.806
29625.m000702 Ricinus communis 29625.m000702 I 0.806
Solyc04g078840.2 Solanum lycopersicum Solyc04g078840.2 I 0.806
cassava32856.m1 Manihot esculenta cassava32856.m1 I 0.805
Pavir.J00256 Panicum virgatum Pavir.J00256 I 0.804
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I 0.804
Sb04g034190 Sorghum bicolor Sb04g034190 I 0.802
ORUFI08G19970 Oryza rufipogon ORUFI08G19970 I 0.801
BGIOSGA028831 Oryza indica BGIOSGA028831 I 0.801
ORGLA08G0211300 Oryza glaberrima ORGLA08G0211300 I 0.801
OPUNC08G15700 Oryza punctata OPUNC08G15700 I 0.801
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I 0.800
Bra040260 Brassica rapa Bra040260 I 0.800
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I 0.800
Bo6g006970 Brassica oleracea Bo6g006970 I 0.800
ABF2 Arabidopsis thaliana AT1G45249 D 0.800
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I 0.800
OS08G0471950 Oryza sativa OS08G0471950 D 0.799
OBART02G33770 Oryza barthii OBART02G33770 I 0.799
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I 0.799
F775_19301 Aegilops tauschii F775_19301 I 0.799
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I 0.799
Traes_3DL_E21790878 Triticum aestivum Traes_3DL_E21790878 I 0.799
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I 0.798
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I 0.796
Carubv10009177m.g Capsella rubella Carubv10009177m.g I 0.796
Sb06g026410 Sorghum bicolor Sb06g026410 I 0.796
GSMUA_Achr5G24570_001 Musa acuminata GSMUA_Achr5G24570_001 I 0.796
GRMZM2G132868 Zea mays GRMZM2G132868 I 0.795
Pavir.J36143 Panicum virgatum Pavir.J36143 I 0.795
GLYMA07G33600 Glycine max GLYMA07G33600 I 0.795
Pavir.J06257 Panicum virgatum Pavir.J06257 I 0.795
MTR_7g104480 Medicago truncatula MTR_7g104480 I 0.793
Pm001315 Prunus mume Pm001315 I 0.793
Lus10021369.g Linum usitatissimum Lus10021369.g I 0.792
Sb08g003760 Sorghum bicolor Sb08g003760 I 0.791
LPERR02G27610 Leersia perrieri LPERR02G27610 I 0.791
Cucsa.241090 Cucumis sativus Cucsa.241090 I 0.791
Ca_00791 Cicer arietinum Ca_00791 I 0.791
OB02G40680 Oryza brachyantha OB02G40680 I 0.791
OLONG_000475 Oryza longistaminata OLONG_000475 I 0.790
ONIVA08G19830 Oryza nivara ONIVA08G19830 I 0.790
gene14556-v1.0-hybrid Fragaria vesca gene14556-v1.0-hybrid I 0.790
cassava11518.m1 Manihot esculenta cassava11518.m1 I 0.790
GLYMA13G22061 Glycine max GLYMA13G22061 I 0.789
MDP0000701734 Malus domestica MDP0000701734 I 0.789
Gorai.005G259700 Gossypium raimondii Gorai.005G259700 I 0.788
mgf002176m Mimulus guttatus mgf002176m I 0.788
Lus10009755.g Linum usitatissimum Lus10009755.g I 0.788
Pm005288 Prunus mume Pm005288 I 0.788
Bo6g018480 Brassica oleracea Bo6g018480 I 0.788
Eucgr.G01436 Eucalyptus grandis Eucgr.G01436 I 0.787
Ca_06458 Cicer arietinum Ca_06458 I 0.787
MTR_4g085910 Medicago truncatula MTR_4g085910 I 0.787
ABI5 Arabidopsis thaliana AT2G36270 D 0.787
Lus10017049.g Linum usitatissimum Lus10017049.g I 0.786
ABI5 Populus trichocarpa POPTR_0006s08300 I 0.784
TCM_034992 Theobroma cacao TCM_034992 I 0.784
GRMZM2G033413 Zea mays GRMZM2G033413 I 0.784
BRADI4G32090 Brachypodium distachyon BRADI4G32090 I 0.784
GLYMA02G14880 Glycine max GLYMA02G14880 N 0.784
GLYMA10G08370 Glycine max GLYMA10G08370 I 0.784
TCM_000152 Theobroma cacao TCM_000152 I 0.784
SapurV1A.0374s0070 Salix purpurea SapurV1A.0374s0070 I 0.784
GSMUA_Achr6G04270_001 Musa acuminata GSMUA_Achr6G04270_001 I 0.784
POPTR_0009s16610 Populus trichocarpa POPTR_0009s16610 I 0.784
Si006889m.g Setaria italica Si006889m.g I 0.784
Pavir.Da01931 Panicum virgatum Pavir.Da01931 I 0.784
cassava16074.m1 Manihot esculenta cassava16074.m1 I 0.783
30055.m001548 Ricinus communis 30055.m001548 I 0.783
POPTR_0002s06800 Populus trichocarpa POPTR_0002s06800 I 0.783
POPTR_0005s21500 Populus trichocarpa POPTR_0005s21500 I 0.783
SapurV1A.0134s0060 Salix purpurea SapurV1A.0134s0060 I 0.783
Bra018800 Brassica rapa Bra018800 I 0.783
SapurV1A.0625s0150 Salix purpurea SapurV1A.0625s0150 I 0.783
Solyc09g009490.2 Solanum lycopersicum Solyc09g009490.2 I 0.782
DPBF2 Vitis vinifera VIT_06s0080g00340 I 0.782
Carubv10009399m.g Capsella rubella Carubv10009399m.g I 0.782