LBD33 (Vitis vinifera)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 VIT_13s0019g02060 T246249_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_13s0019g02060.t01 LOB 7 106

Links

Other LOB family TFs
Other Vitis vinifera TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0010s20800 Populus trichocarpa POPTR_0010s20800 I 0.909
Ciclev10033354m.g Citrus clementina Ciclev10033354m.g I 0.889
Eucgr.G02955 Eucalyptus grandis Eucgr.G02955 I 0.889
30143.m001171 Ricinus communis 30143.m001171 N 0.869
TCM_042730 Theobroma cacao TCM_042730 I 0.869
SapurV1A.0281s0190 Salix purpurea SapurV1A.0281s0190 I 0.869
evm.TU.supercontig_1.438 Carica papaya evm.TU.supercontig_1.438 I 0.859
PRUPE_ppa018815mg Prunus persica PRUPE_ppa018815mg N 0.838
MDP0000133936 Malus domestica MDP0000133936 N 0.838
Pm018835 Prunus mume Pm018835 N 0.838
MDP0000123797 Malus domestica MDP0000123797 N 0.828
Cagra.2117s0054 Capsella grandiflora Cagra.2117s0054 N 0.818
LBD33 Arabidopsis lyrata Al_scaffold_0006_527 N 0.818
gene26330-v1.0-hybrid Fragaria vesca gene26330-v1.0-hybrid N 0.818
Gorai.011G267700 Gossypium raimondii Gorai.011G267700 I 0.818
Carubv10002921m.g Capsella rubella Carubv10002921m.g N 0.818
cassava34632.m1 Manihot esculenta cassava34632.m1 N 0.808
GLYMA14G07260 Glycine max GLYMA14G07260 N 0.808
LBD33 Arabidopsis thaliana AT5G06080 N 0.808
Bo9g176580 Brassica oleracea Bo9g176580 N 0.798
Bostr.13129s0366 Boechera stricta Bostr.13129s0366 N 0.798
Ca_16122 Cicer arietinum Ca_16122 N 0.798
cassava15468.m1 Manihot esculenta cassava15468.m1 I 0.798
GLYMA02G41710 Glycine max GLYMA02G41710 N 0.798
Bra009161 Brassica rapa Bra009161 N 0.798
MTR_5g080470 Medicago truncatula MTR_5g080470 N 0.788
Cucsa.165150 Cucumis sativus Cucsa.165150 N 0.778
Cla004059 Citrullus lanatus Cla004059 N 0.768
Thhalv10015772m.g Eutrema salsugineum Thhalv10015772m.g N 0.750
TRIUR3_07751 Triticum urartu TRIUR3_07751 I 0.727
Traes_4DS_11C3B0459 Triticum aestivum Traes_4DS_11C3B0459 I 0.727
Traes_4BS_5D9291539 Triticum aestivum Traes_4BS_5D9291539 I 0.727
F775_02052 Aegilops tauschii F775_02052 I 0.727
F775_22967 Aegilops tauschii F775_22967 I 0.727
LBD29 Arabidopsis lyrata fgenesh2_kg.5__2263__AT3G58190.1 I 0.727
GRMZM2G092542 Zea mays GRMZM2G092542 I 0.717
Pavir.Ib00283 Panicum virgatum Pavir.Ib00283 I 0.717
Sb01g046990 Sorghum bicolor Sb01g046990 I 0.717
Si040019m.g Setaria italica Si040019m.g I 0.717
LBD29 Arabidopsis thaliana AT3G58190 I 0.717
LjSGA_002536.2 Lotus japonicus LjSGA_002536.2 I 0.717
BGIOSGA011445 Oryza indica BGIOSGA011445 I 0.717
OS03G0149100 Oryza sativa OS03G0149100 I 0.717
GSMUA_Achr1G02520_001 Musa acuminata GSMUA_Achr1G02520_001 I 0.717
OMERI07G01660 Oryza meridionalis OMERI07G01660 I 0.717
LPERR03G03470 Leersia perrieri LPERR03G03470 I 0.717
MLOC_52276 Hordeum vulgare MLOC_52276 I 0.717
OB03G13890 Oryza brachyantha OB03G13890 I 0.717
ONIVA03G03580 Oryza nivara ONIVA03G03580 I 0.717
OPUNC03G03520 Oryza punctata OPUNC03G03520 I 0.717
ORUFI03G03550 Oryza rufipogon ORUFI03G03550 I 0.717
Pavir.Ia04220 Panicum virgatum Pavir.Ia04220 I 0.717
ORGLA03G0035900 Oryza glaberrima ORGLA03G0035900 I 0.717
GSMUA_AchrUn_randomG23710_001 Musa acuminata GSMUA_AchrUn_randomG23710_001 I 0.717
OBART03G03830 Oryza barthii OBART03G03830 I 0.717
MLOC_61947 Hordeum vulgare MLOC_61947 I 0.711
OLONG_020841 Oryza longistaminata OLONG_020841 I 0.708
OGLUM03G03710 Oryza glumaepatula OGLUM03G03710 I 0.708
Bostr.20903s0070 Boechera stricta Bostr.20903s0070 I 0.707
Lus10004707.g Linum usitatissimum Lus10004707.g N 0.707
Pavir.J34872 Panicum virgatum Pavir.J34872 I 0.707
LjSGA_054888.1 Lotus japonicus LjSGA_054888.1 I 0.707
orange1.1g036534m.g Citrus sinensis orange1.1g036534m.g I 0.707
mgf020558m Mimulus guttatus mgf020558m N 0.707
Ciclev10021992m.g Citrus clementina Ciclev10021992m.g I 0.707
Cagra.0686s0036 Capsella grandiflora Cagra.0686s0036 I 0.707
Eucgr.E01414 Eucalyptus grandis Eucgr.E01414 I 0.707
Gorai.004G073400 Gossypium raimondii Gorai.004G073400 I 0.707
Gorai.008G114400 Gossypium raimondii Gorai.008G114400 I 0.707
Carubv10019250m.g Capsella rubella Carubv10019250m.g I 0.707
Sb01g041130 Sorghum bicolor Sb01g041130 I 0.707
MLOC_10784 Hordeum vulgare MLOC_10784 I 0.707
LPERR03G09330 Leersia perrieri LPERR03G09330 I 0.707
MLOC_55239 Hordeum vulgare MLOC_55239 I 0.707
OBART03G10450 Oryza barthii OBART03G10450 I 0.707
OGLUM03G10340 Oryza glumaepatula OGLUM03G10340 I 0.707
GSMUA_Achr5G11330_001 Musa acuminata GSMUA_Achr5G11330_001 I 0.707
GRMZM2G150594 Zea mays GRMZM2G150594 I 0.707
BGIOSGA011118 Oryza indica BGIOSGA011118 I 0.707
AMTR_s00041p00044170 Amborella trichopoda AMTR_s00041p00044170 I 0.707
BRADI1G68170 Brachypodium distachyon BRADI1G68170 I 0.707
BRADI1G75110 Brachypodium distachyon BRADI1G75110 I 0.707
GRMZM2G110913 Zea mays GRMZM2G110913 I 0.707
OMERI03G09680 Oryza meridionalis OMERI03G09680 I 0.707
OPUNC03G10080 Oryza punctata OPUNC03G10080 I 0.707
Traes_4DL_43D63ABE3 Triticum aestivum Traes_4DL_43D63ABE3 I 0.707
Traes_4BL_A4D0F4AD6 Triticum aestivum Traes_4BL_A4D0F4AD6 I 0.707
Traes_4DL_A2012EA68 Triticum aestivum Traes_4DL_A2012EA68 I 0.707
30174.m008898 Ricinus communis 30174.m008898 I 0.707
cassava36912.valid.m1 Manihot esculenta cassava36912.valid.m1 I 0.707
Traes_4AS_5971FF832 Triticum aestivum Traes_4AS_5971FF832 I 0.707
Traes_4AL_CAF4E16B5 Triticum aestivum Traes_4AL_CAF4E16B5 I 0.707
ORUFI03G10670 Oryza rufipogon ORUFI03G10670 I 0.707
ORGLA03G0100400 Oryza glaberrima ORGLA03G0100400 I 0.707
OS03G0246900 Oryza sativa OS03G0246900 I 0.707
AC149818.2_FG009 Zea mays AC149818.2_FG009 I 0.707
TCM_005496 Theobroma cacao TCM_005496 I 0.707
gw1.42.84.1 Physcomitrella patens gw1.42.84.1 I 0.701