gene26330-v1.0-hybrid (Fragaria vesca)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 gene26330-v1.0-hybrid T246931_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna26330.1-v1.0-hybrid LOB 7 106

Links

Other LOB family TFs
Other Fragaria vesca TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000123797 Malus domestica MDP0000123797 N 0.929
MDP0000133936 Malus domestica MDP0000133936 N 0.919
PRUPE_ppa018815mg Prunus persica PRUPE_ppa018815mg N 0.909
Pm018835 Prunus mume Pm018835 N 0.909
evm.TU.supercontig_1.438 Carica papaya evm.TU.supercontig_1.438 I 0.899
POPTR_0010s20800 Populus trichocarpa POPTR_0010s20800 I 0.879
SapurV1A.0281s0190 Salix purpurea SapurV1A.0281s0190 I 0.879
Eucgr.G02955 Eucalyptus grandis Eucgr.G02955 I 0.869
30143.m001171 Ricinus communis 30143.m001171 N 0.869
TCM_042730 Theobroma cacao TCM_042730 I 0.848
Ciclev10033354m.g Citrus clementina Ciclev10033354m.g I 0.838
cassava15468.m1 Manihot esculenta cassava15468.m1 I 0.830
Gorai.011G267700 Gossypium raimondii Gorai.011G267700 I 0.818
LjSGA_054888.1 Lotus japonicus LjSGA_054888.1 I 0.818
LBD33 Vitis vinifera VIT_13s0019g02060 N 0.818
PK00972.1 Cannabis sativa PK00972.1 I 0.817
cassava34632.m1 Manihot esculenta cassava34632.m1 N 0.808
GLYMA02G41710 Glycine max GLYMA02G41710 N 0.798
GLYMA14G07260 Glycine max GLYMA14G07260 N 0.788
Ca_16122 Cicer arietinum Ca_16122 N 0.768
MTR_5g080470 Medicago truncatula MTR_5g080470 N 0.758
Cagra.2117s0054 Capsella grandiflora Cagra.2117s0054 N 0.747
Carubv10002921m.g Capsella rubella Carubv10002921m.g N 0.747
LBD33 Arabidopsis lyrata Al_scaffold_0006_527 N 0.747
Lus10004707.g Linum usitatissimum Lus10004707.g N 0.747
Cla004059 Citrullus lanatus Cla004059 N 0.747
LBD33 Arabidopsis thaliana AT5G06080 N 0.737
Cucsa.165150 Cucumis sativus Cucsa.165150 N 0.737
Bostr.13129s0366 Boechera stricta Bostr.13129s0366 N 0.737
Bra009161 Brassica rapa Bra009161 N 0.727
Bo9g176580 Brassica oleracea Bo9g176580 N 0.727
gw1.42.84.1 Physcomitrella patens gw1.42.84.1 I 0.724
POPTR_0002s14990 Populus trichocarpa POPTR_0002s14990 I 0.721
OB08G30680 Oryza brachyantha OB08G30680 I 0.717
LBD29 Arabidopsis lyrata fgenesh2_kg.5__2263__AT3G58190.1 I 0.717
PK23380.1 Cannabis sativa PK23380.1 I 0.716
gw1.190.59.1 Physcomitrella patens gw1.190.59.1 I 0.716
SapurV1A.1704s0040 Salix purpurea SapurV1A.1704s0040 I 0.708
LjSGA_002536.2 Lotus japonicus LjSGA_002536.2 I 0.707
POPTR_0002s04200 Populus trichocarpa POPTR_0002s04200 I 0.707
GSMUA_Achr10G06700_001 Musa acuminata GSMUA_Achr10G06700_001 I 0.707
LBD29 Arabidopsis thaliana AT3G58190 I 0.707
Gorai.004G073300 Gossypium raimondii Gorai.004G073300 I 0.707
Bra001087 Brassica rapa Bra001087 I 0.706
OLONG_001985 Oryza longistaminata OLONG_001985 I 0.700