SapurV1A.0281s0190 (Salix purpurea)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 SapurV1A.0281s0190 T247282_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD18
M06962_2.00 		Arabidopsis thaliana
SCGGRRAWHVHGSMRNNDN
NHNNYKSCDBDWTYYCCGS		 Dap-seq
OMalley et al.(2016)
LBD18_col_a 		0.717 0.717
LBD18
M06963_2.00 		Arabidopsis thaliana
CDBDWTTTMHGSHRN
NYDSCDKAAAWHVHG		 Dap-seq
OMalley et al.(2016)
LBD18_colamp_a 		0.717 0.717
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0281s0190.1.p LOB 7 106

Links

Other LOB family TFs
Other Salix purpurea TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0010s20800 Populus trichocarpa POPTR_0010s20800 I 0.960
Ciclev10033354m.g Citrus clementina Ciclev10033354m.g I 0.899
evm.TU.supercontig_1.438 Carica papaya evm.TU.supercontig_1.438 I 0.889
30143.m001171 Ricinus communis 30143.m001171 N 0.879
Eucgr.G02955 Eucalyptus grandis Eucgr.G02955 I 0.879
gene26330-v1.0-hybrid Fragaria vesca gene26330-v1.0-hybrid N 0.879
MDP0000133936 Malus domestica MDP0000133936 N 0.879
PRUPE_ppa018815mg Prunus persica PRUPE_ppa018815mg N 0.869
LBD33 Vitis vinifera VIT_13s0019g02060 N 0.869
Pm018835 Prunus mume Pm018835 N 0.869
MDP0000123797 Malus domestica MDP0000123797 N 0.869
TCM_042730 Theobroma cacao TCM_042730 I 0.869
Gorai.011G267700 Gossypium raimondii Gorai.011G267700 I 0.848
cassava34632.m1 Manihot esculenta cassava34632.m1 N 0.848
GLYMA14G07260 Glycine max GLYMA14G07260 N 0.828
Ca_16122 Cicer arietinum Ca_16122 N 0.818
cassava15468.m1 Manihot esculenta cassava15468.m1 I 0.798
Cagra.2117s0054 Capsella grandiflora Cagra.2117s0054 N 0.798
GLYMA02G41710 Glycine max GLYMA02G41710 N 0.798
Carubv10002921m.g Capsella rubella Carubv10002921m.g N 0.798
LBD33 Arabidopsis thaliana AT5G06080 N 0.788
MTR_5g080470 Medicago truncatula MTR_5g080470 N 0.788
LBD33 Arabidopsis lyrata Al_scaffold_0006_527 N 0.788
Bostr.13129s0366 Boechera stricta Bostr.13129s0366 N 0.778
Cucsa.165150 Cucumis sativus Cucsa.165150 N 0.778
Cla004059 Citrullus lanatus Cla004059 N 0.768
Bra009161 Brassica rapa Bra009161 N 0.758
Bo9g176580 Brassica oleracea Bo9g176580 N 0.758
Lus10004707.g Linum usitatissimum Lus10004707.g N 0.747
LjSGA_002536.2 Lotus japonicus LjSGA_002536.2 I 0.737
PRUPE_ppa010383mg Prunus persica PRUPE_ppa010383mg I 0.727
Cucsa.362840 Cucumis sativus Cucsa.362840 I 0.727
Bra004910 Brassica rapa Bra004910 I 0.727
Pm017936 Prunus mume Pm017936 I 0.727
Cla007068 Citrullus lanatus Cla007068 I 0.727
cassava36912.valid.m1 Manihot esculenta cassava36912.valid.m1 I 0.717
GSMUA_Achr10G06700_001 Musa acuminata GSMUA_Achr10G06700_001 I 0.717
30174.m008898 Ricinus communis 30174.m008898 I 0.717
OB03G13890 Oryza brachyantha OB03G13890 I 0.717
LPERR03G03470 Leersia perrieri LPERR03G03470 I 0.717
BGIOSGA011445 Oryza indica BGIOSGA011445 I 0.717
GSMUA_Achr1G02520_001 Musa acuminata GSMUA_Achr1G02520_001 I 0.717
Carubv10025050m.g Capsella rubella Carubv10025050m.g I 0.717
Ciclev10021992m.g Citrus clementina Ciclev10021992m.g I 0.717
Bo4g024620 Brassica oleracea Bo4g024620 I 0.717
GSMUA_Achr5G11330_001 Musa acuminata GSMUA_Achr5G11330_001 I 0.717
Cagra.0698s0021 Capsella grandiflora Cagra.0698s0021 I 0.717
mgf020558m Mimulus guttatus mgf020558m N 0.717
Aquca_003_00139 Aquilegia coerulea Aquca_003_00139 N 0.717
GSMUA_AchrUn_randomG10470_001 Musa acuminata GSMUA_AchrUn_randomG10470_001 I 0.717
Bostr.25993s0233 Boechera stricta Bostr.25993s0233 I 0.717
LBD29 Arabidopsis lyrata fgenesh2_kg.5__2263__AT3G58190.1 I 0.717
GRMZM2G092542 Zea mays GRMZM2G092542 I 0.717
Pavir.Ib00283 Panicum virgatum Pavir.Ib00283 I 0.717
ORGLA03G0035900 Oryza glaberrima ORGLA03G0035900 I 0.717
Pavir.Ia04220 Panicum virgatum Pavir.Ia04220 I 0.717
ORUFI03G03550 Oryza rufipogon ORUFI03G03550 I 0.717
OPUNC03G03520 Oryza punctata OPUNC03G03520 I 0.717
ONIVA03G03580 Oryza nivara ONIVA03G03580 I 0.717
LjSGA_054888.1 Lotus japonicus LjSGA_054888.1 I 0.717
OMERI07G01660 Oryza meridionalis OMERI07G01660 I 0.717
Thhalv10001791m.g Eutrema salsugineum Thhalv10001791m.g I 0.717
Gorai.008G114400 Gossypium raimondii Gorai.008G114400 I 0.717
OS03G0149100 Oryza sativa OS03G0149100 I 0.717
Si040019m.g Setaria italica Si040019m.g I 0.717
OBART03G03830 Oryza barthii OBART03G03830 I 0.717
Eucgr.E01414 Eucalyptus grandis Eucgr.E01414 I 0.717
orange1.1g036534m.g Citrus sinensis orange1.1g036534m.g I 0.717
Sb01g046990 Sorghum bicolor Sb01g046990 I 0.717
LBD18 Arabidopsis thaliana AT2G45420 D 0.717
LBD18 Arabidopsis lyrata fgenesh2_kg.4__2737__AT2G45420.1 I 0.717
Lus10033873.g Linum usitatissimum Lus10033873.g I 0.707
Pavir.Fa00011 Panicum virgatum Pavir.Fa00011 I 0.707
SapurV1A.0532s0190 Salix purpurea SapurV1A.0532s0190 I 0.707
BGIOSGA026473 Oryza indica BGIOSGA026473 I 0.707
Gorai.004G161100 Gossypium raimondii Gorai.004G161100 I 0.707
LBD29 Arabidopsis thaliana AT3G58190 I 0.707
cassava28659.m1 Manihot esculenta cassava28659.m1 I 0.707
ORGLA08G0192400 Oryza glaberrima ORGLA08G0192400 I 0.707
ORUFI08G26340 Oryza rufipogon ORUFI08G26340 I 0.707
OS08G0563400 Oryza sativa OS08G0563400 I 0.707
OPUNC08G21770 Oryza punctata OPUNC08G21770 I 0.707
ONIVA09G01330 Oryza nivara ONIVA09G01330 I 0.707
OGLUM08G25340 Oryza glumaepatula OGLUM08G25340 I 0.707
OLONG_010223 Oryza longistaminata OLONG_010223 I 0.707
OMERI08G18670 Oryza meridionalis OMERI08G18670 I 0.707
Bra040311 Brassica rapa Bra040311 I 0.707
Solyc01g091420.1 Solanum lycopersicum Solyc01g091420.1 I 0.707
OBART08G23860 Oryza barthii OBART08G23860 I 0.707
MLOC_55239 Hordeum vulgare MLOC_55239 I 0.707
gw1.157.74.1 Physcomitrella patens gw1.157.74.1 I 0.707
OB08G30680 Oryza brachyantha OB08G30680 I 0.707
LBD30 Vitis vinifera VIT_15s0048g00830 I 0.707
Traes_4AS_5971FF832 Triticum aestivum Traes_4AS_5971FF832 I 0.707
Traes_4DL_A2012EA68 Triticum aestivum Traes_4DL_A2012EA68 I 0.707
Aquca_013_00578 Aquilegia coerulea Aquca_013_00578 I 0.707