TCM_037381 (Theobroma cacao)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 TCM_037381 T249948_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS02G0104500
M02271_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH8719 		0.895 0.714
OS02G0104500
M02272_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH9273 		0.895 0.714
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY30032 MADF 436 508

Links

Other MADF family TFs
Other Theobroma cacao TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.010G096900 Gossypium raimondii Gorai.010G096900 I 0.962
Gorai.001G020300 Gossypium raimondii Gorai.001G020300 I 0.938
orange1.1g009174m.g Citrus sinensis orange1.1g009174m.g I 0.930
Ciclev10010595m.g Citrus clementina Ciclev10010595m.g I 0.930
cassava25125.valid.m1 Manihot esculenta cassava25125.valid.m1 I 0.924
SapurV1A.0710s0040 Salix purpurea SapurV1A.0710s0040 I 0.922
POPTR_0006s23800 Populus trichocarpa POPTR_0006s23800 I 0.922
29739.m003611 Ricinus communis 29739.m003611 I 0.914
POPTR_0310s00200 Populus trichocarpa POPTR_0310s00200 I 0.913
POPTR_0018s05520 Populus trichocarpa POPTR_0018s05520 I 0.913
POPTR_0018s05540 Populus trichocarpa POPTR_0018s05540 I 0.913
SapurV1A.0435s0090 Salix purpurea SapurV1A.0435s0090 I 0.913
GSMUA_Achr1G24120_001 Musa acuminata GSMUA_Achr1G24120_001 I 0.913
GSMUA_Achr7G04610_001 Musa acuminata GSMUA_Achr7G04610_001 I 0.913
VIT_04s0008g01850 Vitis vinifera VIT_04s0008g01850 I 0.911
Pavir.Ab00054 Panicum virgatum Pavir.Ab00054 I 0.906
Pavir.Aa03569 Panicum virgatum Pavir.Aa03569 I 0.906
Sb04g000520 Sorghum bicolor Sb04g000520 I 0.906
GRMZM2G037128 Zea mays GRMZM2G037128 I 0.906
Si033157m.g Setaria italica Si033157m.g I 0.899
OB02G10400 Oryza brachyantha OB02G10400 I 0.899
BGIOSGA007300 Oryza indica BGIOSGA007300 I 0.895
OBART02G00380 Oryza barthii OBART02G00380 I 0.895
ORGLA02G0003500 Oryza glaberrima ORGLA02G0003500 I 0.895
OGLUM02G00360 Oryza glumaepatula OGLUM02G00360 I 0.895
ORUFI02G00410 Oryza rufipogon ORUFI02G00410 I 0.895
GRMZM2G111760 Zea mays GRMZM2G111760 I 0.895
OS02G0104500 Oryza sativa OS02G0104500 D 0.895
OPUNC02G00050 Oryza punctata OPUNC02G00050 I 0.895
OMERI02G09240 Oryza meridionalis OMERI02G09240 I 0.895
ONIVA02G00390 Oryza nivara ONIVA02G00390 I 0.895
GSMUA_AchrUn_randomG03020_001 Musa acuminata GSMUA_AchrUn_randomG03020_001 I 0.894
LPERR02G00380 Leersia perrieri LPERR02G00380 I 0.888
gene15385-v1.0-hybrid Fragaria vesca gene15385-v1.0-hybrid I 0.880
evm.TU.supercontig_126.31 Carica papaya evm.TU.supercontig_126.31 I 0.878
BRADI3G00697 Brachypodium distachyon BRADI3G00697 I 0.871
TRIUR3_30093 Triticum urartu TRIUR3_30093 I 0.871
Traes_6AS_52AE4A6E2 Triticum aestivum Traes_6AS_52AE4A6E2 I 0.871
AMTR_s00001p00251940 Amborella trichopoda AMTR_s00001p00251940 I 0.870
MLOC_25460 Hordeum vulgare MLOC_25460 I 0.859
evm.TU.supercontig_21.195 Carica papaya evm.TU.supercontig_21.195 I 0.846
PK14727.1 Cannabis sativa PK14727.1 I 0.845
ORGLA04G0173400 Oryza glaberrima ORGLA04G0173400 I 0.836
Pavir.Ga00673 Panicum virgatum Pavir.Ga00673 I 0.834
Eucgr.D02541 Eucalyptus grandis Eucgr.D02541 I 0.832
Bo6g083670 Brassica oleracea Bo6g083670 I 0.821
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.821
Traes_1DL_772D1D7DF Triticum aestivum Traes_1DL_772D1D7DF I 0.821
MDP0000122269 Malus domestica MDP0000122269 I 0.821
MLOC_14207 Hordeum vulgare MLOC_14207 I 0.819
Traes_1AL_ED83D13D4 Triticum aestivum Traes_1AL_ED83D13D4 I 0.819
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.815
Pavir.Ib03751 Panicum virgatum Pavir.Ib03751 I 0.813