ORGLA04G0173400 (Oryza glaberrima)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 ORGLA04G0173400 T249592_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK15172.1
M01263_2.00 		Cannabis sativa
NNNGTWAHWN
NWDTWACNNN		 PBM
Lambert et al.(2019)
pTH10125 		0.941 0.791
OS02G0104500
M02271_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH8719 		0.887 0.687
OS02G0104500
M02272_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH9273 		0.887 0.687
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA04G0173400.1 MADF 296 365

Links

Other MADF family TFs
Other Oryza glaberrima TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ga00673 Panicum virgatum Pavir.Ga00673 I 0.968
Traes_1DL_772D1D7DF Triticum aestivum Traes_1DL_772D1D7DF I 0.965
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.965
MDP0000122269 Malus domestica MDP0000122269 I 0.962
evm.TU.supercontig_21.195 Carica papaya evm.TU.supercontig_21.195 I 0.958
PK14727.1 Cannabis sativa PK14727.1 I 0.958
MLOC_14207 Hordeum vulgare MLOC_14207 I 0.957
Traes_1AL_ED83D13D4 Triticum aestivum Traes_1AL_ED83D13D4 I 0.957
Eucgr.D02541 Eucalyptus grandis Eucgr.D02541 I 0.953
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.950
TRIUR3_29570 Triticum urartu TRIUR3_29570 I 0.950
BGIOSGA011584 Oryza indica BGIOSGA011584 I 0.948
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.947
Bo6g083670 Brassica oleracea Bo6g083670 I 0.943
PK15172.1 Cannabis sativa PK15172.1 D 0.941
Lus10028584.g Linum usitatissimum Lus10028584.g I 0.940
Traes_4DL_DC6A55EEE Triticum aestivum Traes_4DL_DC6A55EEE I 0.936
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.936
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.932
LjSGA_034643.2 Lotus japonicus LjSGA_034643.2 I 0.932
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.930
VIT_04s0008g01850 Vitis vinifera VIT_04s0008g01850 I 0.925
Pavir.J25029 Panicum virgatum Pavir.J25029 I 0.923
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.922
Pavir.Ib03751 Panicum virgatum Pavir.Ib03751 I 0.921
Aquca_023_00132 Aquilegia coerulea Aquca_023_00132 I 0.911
cassava25125.valid.m1 Manihot esculenta cassava25125.valid.m1 I 0.907
OB02G10400 Oryza brachyantha OB02G10400 I 0.905
SapurV1A.0435s0090 Salix purpurea SapurV1A.0435s0090 I 0.905
POPTR_0310s00200 Populus trichocarpa POPTR_0310s00200 I 0.905
POPTR_0018s05520 Populus trichocarpa POPTR_0018s05520 I 0.905
POPTR_0018s05540 Populus trichocarpa POPTR_0018s05540 I 0.904
Pavir.Ab00054 Panicum virgatum Pavir.Ab00054 I 0.898
GRMZM2G037128 Zea mays GRMZM2G037128 I 0.898
Ciclev10010595m.g Citrus clementina Ciclev10010595m.g I 0.898
GSMUA_Achr7G04610_001 Musa acuminata GSMUA_Achr7G04610_001 I 0.898
Sb04g000520 Sorghum bicolor Sb04g000520 I 0.898
orange1.1g009174m.g Citrus sinensis orange1.1g009174m.g I 0.898
Pavir.Aa03569 Panicum virgatum Pavir.Aa03569 I 0.898
POPTR_0006s23800 Populus trichocarpa POPTR_0006s23800 I 0.897
SapurV1A.0710s0040 Salix purpurea SapurV1A.0710s0040 I 0.897
29739.m003611 Ricinus communis 29739.m003611 I 0.897
LPERR02G00380 Leersia perrieri LPERR02G00380 I 0.894
Si033157m.g Setaria italica Si033157m.g I 0.890
OGLUM02G00360 Oryza glumaepatula OGLUM02G00360 I 0.887
OBART02G00380 Oryza barthii OBART02G00380 I 0.887
OMERI02G09240 Oryza meridionalis OMERI02G09240 I 0.887
GRMZM2G111760 Zea mays GRMZM2G111760 I 0.887
ORGLA02G0003500 Oryza glaberrima ORGLA02G0003500 I 0.887
OS02G0104500 Oryza sativa OS02G0104500 D 0.887
ORUFI02G00410 Oryza rufipogon ORUFI02G00410 I 0.887
BGIOSGA007300 Oryza indica BGIOSGA007300 I 0.887
ONIVA02G00390 Oryza nivara ONIVA02G00390 I 0.887
OPUNC02G00050 Oryza punctata OPUNC02G00050 I 0.887
gene15385-v1.0-hybrid Fragaria vesca gene15385-v1.0-hybrid I 0.879
SELMODRAFT_24518 Selaginella moellendorffii SELMODRAFT_24518 I 0.876
GSMUA_AchrUn_randomG03020_001 Musa acuminata GSMUA_AchrUn_randomG03020_001 I 0.876
SELMODRAFT_14382 Selaginella moellendorffii SELMODRAFT_14382 I 0.876
TRIUR3_30093 Triticum urartu TRIUR3_30093 I 0.860
BRADI3G00697 Brachypodium distachyon BRADI3G00697 I 0.860
Traes_6AS_52AE4A6E2 Triticum aestivum Traes_6AS_52AE4A6E2 I 0.860
GLYMA09G01670 Glycine max GLYMA09G01670 N 0.856
evm.TU.supercontig_126.31 Carica papaya evm.TU.supercontig_126.31 I 0.854
Gorai.010G096900 Gossypium raimondii Gorai.010G096900 I 0.849
GSMUA_Achr1G24120_001 Musa acuminata GSMUA_Achr1G24120_001 I 0.849
MLOC_25460 Hordeum vulgare MLOC_25460 I 0.848
GLYMA15G12591 Glycine max GLYMA15G12591 N 0.846
LjSGA_134698.1 Lotus japonicus LjSGA_134698.1 I 0.843
PK17889.1 Cannabis sativa PK17889.1 N 0.838
Aquca_005_00325 Aquilegia coerulea Aquca_005_00325 N 0.837
TCM_037381 Theobroma cacao TCM_037381 I 0.836
Ca_07908 Cicer arietinum Ca_07908 N 0.834
MTR_2g026725 Medicago truncatula MTR_2g026725 I 0.820
Pm009623 Prunus mume Pm009623 N 0.818
PRUPE_ppa026454mg Prunus persica PRUPE_ppa026454mg N 0.818