Lus10028584.g (Linum usitatissimum)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Lus10028584.g T250747_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK15172.1
M01263_2.00 		Cannabis sativa
NNNGTWAHWN
NWDTWACNNN		 PBM
Lambert et al.(2019)
pTH10125 		0.927 0.771
OS02G0104500
M02271_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH8719 		0.886 0.657
OS02G0104500
M02272_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH9273 		0.886 0.657
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10028584 MADF 286 358

Links

Other MADF family TFs
Other Linum usitatissimum TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.962
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.950
LjSGA_034643.2 Lotus japonicus LjSGA_034643.2 I 0.950
Traes_4DL_DC6A55EEE Triticum aestivum Traes_4DL_DC6A55EEE I 0.947
PK14727.1 Cannabis sativa PK14727.1 I 0.945
Traes_1DL_772D1D7DF Triticum aestivum Traes_1DL_772D1D7DF I 0.945
MDP0000122269 Malus domestica MDP0000122269 I 0.945
evm.TU.supercontig_21.195 Carica papaya evm.TU.supercontig_21.195 I 0.945
Pavir.Ga00673 Panicum virgatum Pavir.Ga00673 I 0.944
ORGLA04G0173400 Oryza glaberrima ORGLA04G0173400 I 0.940
TRIUR3_29570 Triticum urartu TRIUR3_29570 I 0.938
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.938
Bo6g083670 Brassica oleracea Bo6g083670 I 0.937
Eucgr.D02541 Eucalyptus grandis Eucgr.D02541 I 0.937
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.937
Traes_1AL_ED83D13D4 Triticum aestivum Traes_1AL_ED83D13D4 I 0.933
MLOC_14207 Hordeum vulgare MLOC_14207 I 0.933
Pavir.J25029 Panicum virgatum Pavir.J25029 I 0.929
PK15172.1 Cannabis sativa PK15172.1 D 0.927
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.924
BGIOSGA011584 Oryza indica BGIOSGA011584 I 0.919
Pavir.Ib03751 Panicum virgatum Pavir.Ib03751 I 0.916
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.911
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.910
Aquca_023_00132 Aquilegia coerulea Aquca_023_00132 I 0.906
VIT_04s0008g01850 Vitis vinifera VIT_04s0008g01850 I 0.896
GRMZM2G111760 Zea mays GRMZM2G111760 I 0.886
BGIOSGA007300 Oryza indica BGIOSGA007300 I 0.886
OS02G0104500 Oryza sativa OS02G0104500 D 0.886
OMERI02G09240 Oryza meridionalis OMERI02G09240 I 0.886
OGLUM02G00360 Oryza glumaepatula OGLUM02G00360 I 0.886
OBART02G00380 Oryza barthii OBART02G00380 I 0.886
ONIVA02G00390 Oryza nivara ONIVA02G00390 I 0.886
OPUNC02G00050 Oryza punctata OPUNC02G00050 I 0.886
ORUFI02G00410 Oryza rufipogon ORUFI02G00410 I 0.886
ORGLA02G0003500 Oryza glaberrima ORGLA02G0003500 I 0.886
LPERR02G00380 Leersia perrieri LPERR02G00380 I 0.878
Ciclev10010595m.g Citrus clementina Ciclev10010595m.g I 0.873
29739.m003611 Ricinus communis 29739.m003611 I 0.873
orange1.1g009174m.g Citrus sinensis orange1.1g009174m.g I 0.873
Pavir.Ab00054 Panicum virgatum Pavir.Ab00054 I 0.873
Pavir.Aa03569 Panicum virgatum Pavir.Aa03569 I 0.873
Sb04g000520 Sorghum bicolor Sb04g000520 I 0.873
GSMUA_Achr7G04610_001 Musa acuminata GSMUA_Achr7G04610_001 I 0.873
GRMZM2G037128 Zea mays GRMZM2G037128 I 0.873
POPTR_0018s05520 Populus trichocarpa POPTR_0018s05520 I 0.871
POPTR_0018s05540 Populus trichocarpa POPTR_0018s05540 I 0.871
POPTR_0310s00200 Populus trichocarpa POPTR_0310s00200 I 0.871
SapurV1A.0435s0090 Salix purpurea SapurV1A.0435s0090 I 0.871
GSMUA_AchrUn_randomG03020_001 Musa acuminata GSMUA_AchrUn_randomG03020_001 I 0.865
cassava25125.valid.m1 Manihot esculenta cassava25125.valid.m1 I 0.864
OB02G10400 Oryza brachyantha OB02G10400 I 0.864
POPTR_0006s23800 Populus trichocarpa POPTR_0006s23800 I 0.860
SapurV1A.0710s0040 Salix purpurea SapurV1A.0710s0040 I 0.860
Si033157m.g Setaria italica Si033157m.g I 0.851
BRADI3G00697 Brachypodium distachyon BRADI3G00697 I 0.844
Traes_6AS_52AE4A6E2 Triticum aestivum Traes_6AS_52AE4A6E2 I 0.844
TRIUR3_30093 Triticum urartu TRIUR3_30093 I 0.844
evm.TU.supercontig_126.31 Carica papaya evm.TU.supercontig_126.31 I 0.843
gene15385-v1.0-hybrid Fragaria vesca gene15385-v1.0-hybrid I 0.840
LjSGA_134698.1 Lotus japonicus LjSGA_134698.1 I 0.837
SELMODRAFT_14382 Selaginella moellendorffii SELMODRAFT_14382 I 0.832
SELMODRAFT_24518 Selaginella moellendorffii SELMODRAFT_24518 I 0.832
MLOC_25460 Hordeum vulgare MLOC_25460 I 0.831
GSMUA_Achr1G24120_001 Musa acuminata GSMUA_Achr1G24120_001 I 0.814
PK17889.1 Cannabis sativa PK17889.1 N 0.813