CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_1AL_ED83D13D4
(
Triticum aestivum
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF10545 (MADF_DNA_bdg)
IPR006578
Traes_1AL_ED83D13D4
T249954_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK15172.1
M01263_2.00
Cannabis sativa
NNNGTWAHWN
NWDTWACNNN
PBM
Lambert et al.(2019)
pTH10125
0.933
0.710
OS02G0104500
M02271_2.00
Oryza sativa
NDGTAAWWHN
NDWWTTACHN
PBM
Weirauch et al.(2014)
pTH8719
0.896
0.623
OS02G0104500
M02272_2.00
Oryza sativa
NDGTAAWWHN
NDWWTTACHN
PBM
Weirauch et al.(2014)
pTH9273
0.896
0.623
For this family, TFs with SR scores >
0.812
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_1AL_ED83D13D4.2
MADF
172
245
RSNLDMRYQEAGPKGPLWEEISAGMRRMGYNRSSKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLEAL
Links
Other
MADF
family TFs
Other
Triticum aestivum
TFs
76 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_14207
Hordeum vulgare
MLOC_14207
I
0.971
Traes_1DL_772D1D7DF
Triticum aestivum
Traes_1DL_772D1D7DF
I
0.964
MDP0000122269
Malus domestica
MDP0000122269
I
0.962
Aquca_037_00343
Aquilegia coerulea
Aquca_037_00343
I
0.961
Pavir.Ga00673
Panicum virgatum
Pavir.Ga00673
I
0.960
evm.TU.supercontig_21.195
Carica papaya
evm.TU.supercontig_21.195
I
0.958
ORGLA04G0173400
Oryza glaberrima
ORGLA04G0173400
I
0.957
PK14727.1
Cannabis sativa
PK14727.1
I
0.957
MLOC_74813
Hordeum vulgare
MLOC_74813
I
0.953
Bo6g083670
Brassica oleracea
Bo6g083670
I
0.952
Eucgr.D02541
Eucalyptus grandis
Eucgr.D02541
I
0.952
Pavir.Ab02437
Panicum virgatum
Pavir.Ab02437
I
0.951
MLOC_22988
Hordeum vulgare
MLOC_22988
I
0.950
TRIUR3_29570
Triticum urartu
TRIUR3_29570
I
0.950
BGIOSGA011584
Oryza indica
BGIOSGA011584
I
0.947
orange1.1g007316m.g
Citrus sinensis
orange1.1g007316m.g
I
0.946
Pavir.Ib03751
Panicum virgatum
Pavir.Ib03751
I
0.946
Pavir.J25029
Panicum virgatum
Pavir.J25029
I
0.935
Lus10028584.g
Linum usitatissimum
Lus10028584.g
I
0.933
PK15172.1
Cannabis sativa
PK15172.1
D
0.933
LjSGA_034643.2
Lotus japonicus
LjSGA_034643.2
I
0.930
MLOC_70549
Hordeum vulgare
MLOC_70549
I
0.929
Traes_4DL_DC6A55EEE
Triticum aestivum
Traes_4DL_DC6A55EEE
I
0.929
SapurV1A.0655s0060
Salix purpurea
SapurV1A.0655s0060
I
0.929
VIT_04s0008g01850
Vitis vinifera
VIT_04s0008g01850
I
0.916
OB02G10400
Oryza brachyantha
OB02G10400
I
0.913
Aquca_023_00132
Aquilegia coerulea
Aquca_023_00132
I
0.911
GSMUA_Achr7G04610_001
Musa acuminata
GSMUA_Achr7G04610_001
I
0.907
Sb04g000520
Sorghum bicolor
Sb04g000520
I
0.907
Ciclev10010595m.g
Citrus clementina
Ciclev10010595m.g
I
0.907
GRMZM2G037128
Zea mays
GRMZM2G037128
I
0.907
Pavir.Ab00054
Panicum virgatum
Pavir.Ab00054
I
0.907
Pavir.Aa03569
Panicum virgatum
Pavir.Aa03569
I
0.907
orange1.1g009174m.g
Citrus sinensis
orange1.1g009174m.g
I
0.907
LPERR02G00380
Leersia perrieri
LPERR02G00380
I
0.903
cassava25125.valid.m1
Manihot esculenta
cassava25125.valid.m1
I
0.897
ONIVA02G00390
Oryza nivara
ONIVA02G00390
I
0.896
OMERI02G09240
Oryza meridionalis
OMERI02G09240
I
0.896
OGLUM02G00360
Oryza glumaepatula
OGLUM02G00360
I
0.896
GRMZM2G111760
Zea mays
GRMZM2G111760
I
0.896
OPUNC02G00050
Oryza punctata
OPUNC02G00050
I
0.896
ORGLA02G0003500
Oryza glaberrima
ORGLA02G0003500
I
0.896
BGIOSGA007300
Oryza indica
BGIOSGA007300
I
0.896
OS02G0104500
Oryza sativa
OS02G0104500
D
0.896
ORUFI02G00410
Oryza rufipogon
ORUFI02G00410
I
0.896
OBART02G00380
Oryza barthii
OBART02G00380
I
0.896
POPTR_0018s05520
Populus trichocarpa
POPTR_0018s05520
I
0.894
SapurV1A.0435s0090
Salix purpurea
SapurV1A.0435s0090
I
0.894
POPTR_0018s05540
Populus trichocarpa
POPTR_0018s05540
I
0.894
POPTR_0310s00200
Populus trichocarpa
POPTR_0310s00200
I
0.894
gene15385-v1.0-hybrid
Fragaria vesca
gene15385-v1.0-hybrid
I
0.889
SapurV1A.0710s0040
Salix purpurea
SapurV1A.0710s0040
I
0.886
POPTR_0006s23800
Populus trichocarpa
POPTR_0006s23800
I
0.886
29739.m003611
Ricinus communis
29739.m003611
I
0.886
Si033157m.g
Setaria italica
Si033157m.g
I
0.879
GSMUA_AchrUn_randomG03020_001
Musa acuminata
GSMUA_AchrUn_randomG03020_001
I
0.875
TRIUR3_30093
Triticum urartu
TRIUR3_30093
I
0.871
BRADI3G00697
Brachypodium distachyon
BRADI3G00697
I
0.871
Traes_6AS_52AE4A6E2
Triticum aestivum
Traes_6AS_52AE4A6E2
I
0.871
GSMUA_Achr1G24120_001
Musa acuminata
GSMUA_Achr1G24120_001
I
0.860
GLYMA09G01670
Glycine max
GLYMA09G01670
N
0.855
SELMODRAFT_24518
Selaginella moellendorffii
SELMODRAFT_24518
I
0.853
SELMODRAFT_14382
Selaginella moellendorffii
SELMODRAFT_14382
I
0.853
MLOC_25460
Hordeum vulgare
MLOC_25460
I
0.846
GLYMA15G12591
Glycine max
GLYMA15G12591
N
0.845
LjSGA_134698.1
Lotus japonicus
LjSGA_134698.1
I
0.844
evm.TU.supercontig_126.31
Carica papaya
evm.TU.supercontig_126.31
I
0.839
PK17889.1
Cannabis sativa
PK17889.1
N
0.838
Gorai.010G096900
Gossypium raimondii
Gorai.010G096900
I
0.834
Ca_07908
Cicer arietinum
Ca_07908
N
0.834
Aquca_005_00325
Aquilegia coerulea
Aquca_005_00325
N
0.826
Bo2g133550
Brassica oleracea
Bo2g133550
I
0.825
TCM_037381
Theobroma cacao
TCM_037381
I
0.819
MTR_2g026725
Medicago truncatula
MTR_2g026725
I
0.818
PRUPE_ppa026454mg
Prunus persica
PRUPE_ppa026454mg
N
0.817
Pm009623
Prunus mume
Pm009623
N
0.817