GRMZM2G069370 (Zea mays)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 GRMZM2G069370 T254279_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MADS26
M10974_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS26_01 		0.809 0.809
AGL12
M10906_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL12_01 		0.787 0.787
MADS50
M10968_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS50_01 		0.723 0.723
AGL15
M06992_2.00 		Arabidopsis thaliana
WNTTWCCHAAWDWRGAAAN
NTTTCYWHWTTDGGWAANW		 Dap-seq
OMalley et al.(2016)
AGL15_col_a 		0.702 0.702
AGL15
M06993_2.00 		Arabidopsis thaliana
DNTTWCCHAAWDDRGAAANHH
DDNTTTCYHHWTTDGGWAANH		 Dap-seq
OMalley et al.(2016)
AGL15_colamp_a 		0.702 0.702
AGL15
M10927_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL15_01 		0.702 0.702
AGL15
M10928_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL15_02 		0.702 0.702
MLOC_61901
M10964_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BM8_01 		0.702 0.702
Q40882_PETHY
M11003_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP11_01 		0.702 0.702
Q9FR84_MAIZE
M10981_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS3_03 		0.702 0.702
Q41829_MAIZE
M10977_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ZAP1_02 		0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G069370_P01 MADS box 10 56

Links

Other MADS box family TFs
Other Zea mays TFs

204 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb06g017660 Sorghum bicolor Sb06g017660 I 0.957
Si012632m.g Setaria italica Si012632m.g I 0.936
Pavir.Gb01604 Panicum virgatum Pavir.Gb01604 I 0.936
Pavir.Ga01731 Panicum virgatum Pavir.Ga01731 I 0.915
OGLUM04G13520 Oryza glumaepatula OGLUM04G13520 I 0.915
OBART04G13800 Oryza barthii OBART04G13800 I 0.915
OB04G21020 Oryza brachyantha OB04G21020 I 0.915
LPERR04G10680 Leersia perrieri LPERR04G10680 I 0.915
OGLUM04G13550 Oryza glumaepatula OGLUM04G13550 I 0.915
OLONG_023630 Oryza longistaminata OLONG_023630 I 0.915
ORUFI04G15040 Oryza rufipogon ORUFI04G15040 I 0.915
ORUFI04G15060 Oryza rufipogon ORUFI04G15060 I 0.915
BRADI5G11270 Brachypodium distachyon BRADI5G11270 I 0.915
ONIVA04G12010 Oryza nivara ONIVA04G12010 I 0.915
OMERI04G12400 Oryza meridionalis OMERI04G12400 I 0.915
BGIOSGA015021 Oryza indica BGIOSGA015021 I 0.915
OBART04G13770 Oryza barthii OBART04G13770 I 0.894
OMERI04G12420 Oryza meridionalis OMERI04G12420 I 0.894
Traes_2BL_E0978B1BC Triticum aestivum Traes_2BL_E0978B1BC I 0.872
BRADI3G13570 Brachypodium distachyon BRADI3G13570 I 0.872
Traes_2DL_71F120931 Triticum aestivum Traes_2DL_71F120931 I 0.872
F775_05799 Aegilops tauschii F775_05799 I 0.872
TRIUR3_02252 Triticum urartu TRIUR3_02252 I 0.872
OPUNC04G11660 Oryza punctata OPUNC04G11660 I 0.854
GRMZM2G117961 Zea mays GRMZM2G117961 I 0.851
Traes_7AL_67921A952 Triticum aestivum Traes_7AL_67921A952 I 0.851
Si014419m.g Setaria italica Si014419m.g I 0.851
OB08G11080 Oryza brachyantha OB08G11080 I 0.851
TRIUR3_13653 Triticum urartu TRIUR3_13653 I 0.851
Traes_7BL_9BCF391CF Triticum aestivum Traes_7BL_9BCF391CF I 0.851
AMTR_s00071p00198970 Amborella trichopoda AMTR_s00071p00198970 I 0.851
LPERR08G01250 Leersia perrieri LPERR08G01250 I 0.851
F775_26271 Aegilops tauschii F775_26271 I 0.851
Traes_7DL_CAF83263E Triticum aestivum Traes_7DL_CAF83263E I 0.851
Sb07g001250 Sorghum bicolor Sb07g001250 I 0.851
MLOC_53973 Hordeum vulgare MLOC_53973 I 0.851
OPUNC08G01030 Oryza punctata OPUNC08G01030 I 0.851
Pavir.J40795 Panicum virgatum Pavir.J40795 I 0.851
Lus10009472.g Linum usitatissimum Lus10009472.g I 0.830
cassava6262.valid.m1 Manihot esculenta cassava6262.valid.m1 I 0.830
TCM_036568 Theobroma cacao TCM_036568 I 0.830
Lus10001277.g Linum usitatissimum Lus10001277.g I 0.830
GSMUA_Achr11G19350_001 Musa acuminata GSMUA_Achr11G19350_001 I 0.830
GRMZM2G105387 Zea mays GRMZM2G105387 I 0.830
PK26896.1 Cannabis sativa PK26896.1 I 0.809
MADS26 Oryza sativa OS08G0112700 D 0.809
OBART08G00930 Oryza barthii OBART08G00930 I 0.809
OLONG_011815 Oryza longistaminata OLONG_011815 I 0.809
GSMUA_Achr7G02960_001 Musa acuminata GSMUA_Achr7G02960_001 I 0.809
Pavir.J09556 Panicum virgatum Pavir.J09556 I 0.809
ONIVA08G00920 Oryza nivara ONIVA08G00920 I 0.809
BGIOSGA027872 Oryza indica BGIOSGA027872 I 0.809
Gorai.013G135200 Gossypium raimondii Gorai.013G135200 I 0.809
Eucgr.F02956 Eucalyptus grandis Eucgr.F02956 I 0.809
ORUFI08G00950 Oryza rufipogon ORUFI08G00950 I 0.809
ORGLA08G0003200 Oryza glaberrima ORGLA08G0003200 I 0.809
PDK_20s1439001g001 Phoenix dactylifera PDK_20s1439001g001 I 0.809
OGLUM08G00990 Oryza glumaepatula OGLUM08G00990 I 0.809
29907.m000663 Ricinus communis 29907.m000663 I 0.809
AGL12 Arabidopsis thaliana AT1G71692 D 0.787
PDK_20s1302432g001 Phoenix dactylifera PDK_20s1302432g001 I 0.787
Carubv10020947m.g Capsella rubella Carubv10020947m.g I 0.787
Bo2g073010 Brassica oleracea Bo2g073010 I 0.787
Cagra.2418s0012 Capsella grandiflora Cagra.2418s0012 I 0.787
Solyc11g032100.1 Solanum lycopersicum Solyc11g032100.1 I 0.787
mgf017448m Mimulus guttatus mgf017448m I 0.787
SapurV1A.0945s0060 Salix purpurea SapurV1A.0945s0060 I 0.787
SapurV1A.0675s0070 Salix purpurea SapurV1A.0675s0070 I 0.787
Cla012709 Citrullus lanatus Cla012709 I 0.787
Ca_19954 Cicer arietinum Ca_19954 I 0.787
SapurV1A.3049s0010 Salix purpurea SapurV1A.3049s0010 I 0.787
GLYMA12G00770 Glycine max GLYMA12G00770 I 0.787
AGL12 Arabidopsis lyrata fgenesh2_kg.2__1419__AT1G71692.1 I 0.787
cassava21127.m1 Manihot esculenta cassava21127.m1 I 0.787
GLYMA09G36590 Glycine max GLYMA09G36590 I 0.787
Cucsa.061750 Cucumis sativus Cucsa.061750 I 0.787
AGL12 Vitis vinifera VIT_18s0041g02140 I 0.787
Bo6g113110 Brassica oleracea Bo6g113110 I 0.787
POPTR_0013s10190 Populus trichocarpa POPTR_0013s10190 I 0.787
Bra016128 Brassica rapa Bra016128 I 0.787
Bra007972 Brassica rapa Bra007972 I 0.787
MDP0000316609 Malus domestica MDP0000316609 I 0.787
PGSC0003DMG401018787 Solanum tuberosum PGSC0003DMG401018787 I 0.787
MTR_4g036050 Medicago truncatula MTR_4g036050 I 0.787
Ciclev10023354m.g Citrus clementina Ciclev10023354m.g I 0.771
POPTR_0019s10540 Populus trichocarpa POPTR_0019s10540 I 0.771
evm.TU.supercontig_21.50 Carica papaya evm.TU.supercontig_21.50 I 0.766
MDP0000193953 Malus domestica MDP0000193953 I 0.766
MDP0000192806 Malus domestica MDP0000192806 I 0.766
gene27105-v1.0-hybrid Fragaria vesca gene27105-v1.0-hybrid I 0.766
Bra003919 Brassica rapa Bra003919 I 0.766
Bostr.10273s0193 Boechera stricta Bostr.10273s0193 I 0.766
Aquca_014_00077 Aquilegia coerulea Aquca_014_00077 I 0.766
Thhalv10019132m.g Eutrema salsugineum Thhalv10019132m.g I 0.766
orange1.1g028961m.g Citrus sinensis orange1.1g028961m.g I 0.766
Bo6g094120 Brassica oleracea Bo6g094120 I 0.766
Pavir.Ia02902 Panicum virgatum Pavir.Ia02902 I 0.745
PRUPE_ppa015966mg Prunus persica PRUPE_ppa015966mg I 0.745
Pm004239 Prunus mume Pm004239 I 0.745
BRADI4G40357 Brachypodium distachyon BRADI4G40357 I 0.745
Pavir.Ca00337 Panicum virgatum Pavir.Ca00337 I 0.745
Si024640m.g Setaria italica Si024640m.g I 0.745
BRADI4G40940 Brachypodium distachyon BRADI4G40940 I 0.745
OLONG_023633 Oryza longistaminata OLONG_023633 I 0.745
PRUPE_ppa019906mg Prunus persica PRUPE_ppa019906mg I 0.723
Pm024524 Prunus mume Pm024524 I 0.723
Sb01g030570 Sorghum bicolor Sb01g030570 I 0.723
Si038299m.g Setaria italica Si038299m.g I 0.723
Aquca_013_00471 Aquilegia coerulea Aquca_013_00471 I 0.723
OPUNC04G22650 Oryza punctata OPUNC04G22650 I 0.723
OBART03G01800 Oryza barthii OBART03G01800 I 0.723
PK19764.1 Cannabis sativa PK19764.1 I 0.723
OB03G11760 Oryza brachyantha OB03G11760 I 0.723
OBART04G25610 Oryza barthii OBART04G25610 I 0.723
OGLUM03G01750 Oryza glumaepatula OGLUM03G01750 I 0.723
POPTR_0006s04730 Populus trichocarpa POPTR_0006s04730 I 0.723
OGLUM04G25090 Oryza glumaepatula OGLUM04G25090 I 0.723
Pavir.Ia04538 Panicum virgatum Pavir.Ia04538 I 0.723
LPERR03G01640 Leersia perrieri LPERR03G01640 I 0.723
SapurV1A.0024s0570 Salix purpurea SapurV1A.0024s0570 I 0.723
GLYMA08G06991 Glycine max GLYMA08G06991 I 0.723
GSMUA_Achr11G21460_001 Musa acuminata GSMUA_Achr11G21460_001 I 0.723
GSMUA_Achr2G04340_001 Musa acuminata GSMUA_Achr2G04340_001 I 0.723
Pavir.J22336 Panicum virgatum Pavir.J22336 I 0.723
GSMUA_Achr5G20280_001 Musa acuminata GSMUA_Achr5G20280_001 I 0.723
OMERI03G01730 Oryza meridionalis OMERI03G01730 I 0.723
OLONG_010918 Oryza longistaminata OLONG_010918 I 0.723
ORUFI03G01510 Oryza rufipogon ORUFI03G01510 I 0.723
ORGLA04G0222300 Oryza glaberrima ORGLA04G0222300 I 0.723
BGIOSGA017110 Oryza indica BGIOSGA017110 I 0.723
ORUFI04G26810 Oryza rufipogon ORUFI04G26810 I 0.723
MADS31 Oryza sativa OS04G0614100 I 0.723
MADS50 Oryza sativa OS03G0122600 D 0.723
ORGLA03G0015400 Oryza glaberrima ORGLA03G0015400 I 0.723
OPUNC03G01630 Oryza punctata OPUNC03G01630 I 0.723
POPTR_0002s15310 Populus trichocarpa POPTR_0002s15310 I 0.723
OMERI04G20840 Oryza meridionalis OMERI04G20840 I 0.723
ONIVA03G01420 Oryza nivara ONIVA03G01420 I 0.723
SapurV1A.0019s1110 Salix purpurea SapurV1A.0019s1110 I 0.702
cassava38700.m1 Manihot esculenta cassava38700.m1 I 0.702
Lus10002763.g Linum usitatissimum Lus10002763.g I 0.702
SapurV1A.0068s0650 Salix purpurea SapurV1A.0068s0650 I 0.702
SapurV1A.0228s0130 Salix purpurea SapurV1A.0228s0130 I 0.702
MDP0000144597 Malus domestica MDP0000144597 I 0.702
SapurV1A.0578s0130 Salix purpurea SapurV1A.0578s0130 I 0.702
Pavir.Ib00012 Panicum virgatum Pavir.Ib00012 I 0.702
Pavir.Bb00065 Panicum virgatum Pavir.Bb00065 I 0.702
Pavir.Ba03990 Panicum virgatum Pavir.Ba03990 I 0.702
Ciclev10005698m.g Citrus clementina Ciclev10005698m.g I 0.702
Ciclev10016427m.g Citrus clementina Ciclev10016427m.g I 0.702
cassava3099.m1 Manihot esculenta cassava3099.m1 I 0.702
orange1.1g039982m.g Citrus sinensis orange1.1g039982m.g I 0.702
mgf006616m Mimulus guttatus mgf006616m I 0.702
PGSC0003DMG400000008 Solanum tuberosum PGSC0003DMG400000008 I 0.702
LPERR07G00480 Leersia perrieri LPERR07G00480 I 0.702
LPERR10G12950 Leersia perrieri LPERR10G12950 I 0.702
LPERR04G20730 Leersia perrieri LPERR04G20730 I 0.702
GSMUA_Achr7G23690_001 Musa acuminata GSMUA_Achr7G23690_001 I 0.702
GSMUA_Achr1G03630_001 Musa acuminata GSMUA_Achr1G03630_001 I 0.702
MLOC_61901 Hordeum vulgare MLOC_61901 D 0.702
OB10G24040 Oryza brachyantha OB10G24040 I 0.702
OLONG_021245 Oryza longistaminata OLONG_021245 I 0.702
OLONG_017665 Oryza longistaminata OLONG_017665 I 0.702
OGLUM10G16960 Oryza glumaepatula OGLUM10G16960 I 0.702
OBART10G16960 Oryza barthii OBART10G16960 I 0.702
GSMUA_Achr11G19540_001 Musa acuminata GSMUA_Achr11G19540_001 I 0.702
GSMUA_Achr10G10990_001 Musa acuminata GSMUA_Achr10G10990_001 I 0.702
BRADI4G06867 Brachypodium distachyon BRADI4G06867 I 0.702
F775_52406 Aegilops tauschii F775_52406 I 0.702
BRADI2G25090 Brachypodium distachyon BRADI2G25090 I 0.702
MADS56 Oryza indica BGIOSGA033356 I 0.702
AGL15 Arabidopsis thaliana AT5G13790 D 0.702
GRMZM2G026223 Zea mays GRMZM2G026223 I 0.702
GRMZM2G070034 Zea mays GRMZM2G070034 I 0.702
GRMZM2G171365 Zea mays GRMZM2G171365 I 0.702
GRMZM2G148693 Zea mays GRMZM2G148693 I 0.702
GRMZM2G110153 Zea mays GRMZM2G110153 I 0.702
GRMZM2G072582 Zea mays GRMZM2G072582 I 0.702
OMERI10G13430 Oryza meridionalis OMERI10G13430 I 0.702
ONIVA10G18680 Oryza nivara ONIVA10G18680 I 0.702
Solyc11g028020.1 Solanum lycopersicum Solyc11g028020.1 I 0.702
TCM_024579 Theobroma cacao TCM_024579 I 0.702
Solyc08g080100.2 Solanum lycopersicum Solyc08g080100.2 I 0.702
Si038257m.g Setaria italica Si038257m.g I 0.702
Si030802m.g Setaria italica Si030802m.g I 0.702
Traes_2AL_20C2D79E1 Triticum aestivum Traes_2AL_20C2D79E1 I 0.702
Traes_2BL_26F24E716 Triticum aestivum Traes_2BL_26F24E716 I 0.702
Q40882_PETHY Petunia x hybrida Q40882_PETHY D 0.702
Ca_16423 Cicer arietinum Ca_16423 I 0.702
TRIUR3_21876 Triticum urartu TRIUR3_21876 I 0.702
Traes_2DL_903A29CBA Triticum aestivum Traes_2DL_903A29CBA I 0.702
Sb08g006430 Sorghum bicolor Sb08g006430 I 0.702
Sb02g001090 Sorghum bicolor Sb02g001090 I 0.702
PGSC0003DMG400022748 Solanum tuberosum PGSC0003DMG400022748 I 0.702
MADS56 Oryza sativa OS10G0536100 I 0.702
ORUFI10G17990 Oryza rufipogon ORUFI10G17990 I 0.702
ORGLA10G0119200 Oryza glaberrima ORGLA10G0119200 I 0.702
PGSC0003DMG400025525 Solanum tuberosum PGSC0003DMG400025525 I 0.702
POPTR_0001s29100 Populus trichocarpa POPTR_0001s29100 I 0.702
Q9FR84_MAIZE Zea mays Q9FR84_MAIZE D 0.702
Q41829_MAIZE Zea mays Q41829_MAIZE D 0.702
POPTR_0014s07020 Populus trichocarpa POPTR_0014s07020 I 0.702
POPTR_0012s10190 Populus trichocarpa POPTR_0012s10190 I 0.702
cassava26340.m1 Manihot esculenta cassava26340.m1 I 0.702