MADS26 (Oryza sativa)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 OS08G0112700 T255530_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MADS26
M10974_2.00		 Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS26_01		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL12
M10906_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL12_01 		0.766 0.766
Solyc05g012020.2
M10986_2.00 		Solanum lycopersicum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RIN_01 		0.723 0.723
Solyc05g012020.2
M10987_2.00 		Solanum lycopersicum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RIN_Q2_01 		0.723 0.723
Solyc05g012020.2
M10988_2.00 		Solanum lycopersicum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RIN_Q2 		0.723 0.723
FBP24_PETHY
M10997_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP24_01 		0.702 0.702
O82699_MALDO
M11022_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS11_01 		0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OS08T0112700-01 MADS box 10 56

Links

Other MADS box family TFs
Other Oryza sativa TFs

151 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OGLUM08G00990 Oryza glumaepatula OGLUM08G00990 I 1.000
OLONG_011815 Oryza longistaminata OLONG_011815 I 1.000
ONIVA08G00920 Oryza nivara ONIVA08G00920 I 1.000
ORGLA08G0003200 Oryza glaberrima ORGLA08G0003200 I 1.000
OBART08G00930 Oryza barthii OBART08G00930 I 1.000
ORUFI08G00950 Oryza rufipogon ORUFI08G00950 I 1.000
BGIOSGA027872 Oryza indica BGIOSGA027872 I 1.000
TRIUR3_13653 Triticum urartu TRIUR3_13653 I 0.957
OB08G11080 Oryza brachyantha OB08G11080 I 0.957
MLOC_53973 Hordeum vulgare MLOC_53973 I 0.957
Traes_7DL_CAF83263E Triticum aestivum Traes_7DL_CAF83263E I 0.957
F775_26271 Aegilops tauschii F775_26271 I 0.957
Traes_7AL_67921A952 Triticum aestivum Traes_7AL_67921A952 I 0.957
Traes_7BL_9BCF391CF Triticum aestivum Traes_7BL_9BCF391CF I 0.957
OPUNC08G01030 Oryza punctata OPUNC08G01030 I 0.957
LPERR08G01250 Leersia perrieri LPERR08G01250 I 0.957
Si014419m.g Setaria italica Si014419m.g I 0.936
BRADI3G13570 Brachypodium distachyon BRADI3G13570 I 0.936
Sb07g001250 Sorghum bicolor Sb07g001250 I 0.936
GSMUA_Achr11G19350_001 Musa acuminata GSMUA_Achr11G19350_001 I 0.936
Pavir.J40795 Panicum virgatum Pavir.J40795 I 0.936
AMTR_s00071p00198970 Amborella trichopoda AMTR_s00071p00198970 I 0.915
GRMZM2G117961 Zea mays GRMZM2G117961 I 0.894
PDK_20s1439001g001 Phoenix dactylifera PDK_20s1439001g001 I 0.875
PK26896.1 Cannabis sativa PK26896.1 I 0.872
GRMZM2G105387 Zea mays GRMZM2G105387 I 0.872
BGIOSGA015023 Oryza indica BGIOSGA015023 I 0.867
AGL12 Vitis vinifera VIT_18s0041g02140 I 0.854
TCM_036568 Theobroma cacao TCM_036568 I 0.854
Ciclev10023354m.g Citrus clementina Ciclev10023354m.g I 0.854
Aquca_014_00077 Aquilegia coerulea Aquca_014_00077 I 0.851
29907.m000663 Ricinus communis 29907.m000663 I 0.851
OLONG_023633 Oryza longistaminata OLONG_023633 I 0.842
Eucgr.F02956 Eucalyptus grandis Eucgr.F02956 I 0.833
PGSC0003DMG401018787 Solanum tuberosum PGSC0003DMG401018787 I 0.833
Solyc11g032100.1 Solanum lycopersicum Solyc11g032100.1 I 0.833
ONIVA04G11980 Oryza nivara ONIVA04G11980 I 0.833
Gorai.013G135200 Gossypium raimondii Gorai.013G135200 I 0.833
PDK_20s1302432g001 Phoenix dactylifera PDK_20s1302432g001 I 0.833
orange1.1g028961m.g Citrus sinensis orange1.1g028961m.g I 0.833
GLYMA09G36590 Glycine max GLYMA09G36590 I 0.833
GLYMA12G00770 Glycine max GLYMA12G00770 I 0.833
Ca_19954 Cicer arietinum Ca_19954 I 0.833
Cucsa.061750 Cucumis sativus Cucsa.061750 I 0.833
MTR_4g036050 Medicago truncatula MTR_4g036050 I 0.833
mgf017448m Mimulus guttatus mgf017448m I 0.833
Cla012709 Citrullus lanatus Cla012709 I 0.833
PRUPE_ppa015966mg Prunus persica PRUPE_ppa015966mg I 0.830
Pm004239 Prunus mume Pm004239 I 0.830
GSMUA_Achr7G02960_001 Musa acuminata GSMUA_Achr7G02960_001 I 0.830
POPTR_0019s10540 Populus trichocarpa POPTR_0019s10540 I 0.812
SapurV1A.0945s0060 Salix purpurea SapurV1A.0945s0060 I 0.812
SapurV1A.3049s0010 Salix purpurea SapurV1A.3049s0010 I 0.812
evm.TU.supercontig_21.50 Carica papaya evm.TU.supercontig_21.50 I 0.812
OB04G21020 Oryza brachyantha OB04G21020 I 0.809
BRADI5G11270 Brachypodium distachyon BRADI5G11270 I 0.809
GRMZM2G069370 Zea mays GRMZM2G069370 I 0.809
Si012632m.g Setaria italica Si012632m.g I 0.809
Pavir.Gb01604 Panicum virgatum Pavir.Gb01604 I 0.809
BGIOSGA015021 Oryza indica BGIOSGA015021 I 0.809
cassava21127.m1 Manihot esculenta cassava21127.m1 I 0.792
SapurV1A.0675s0070 Salix purpurea SapurV1A.0675s0070 I 0.792
POPTR_0013s10190 Populus trichocarpa POPTR_0013s10190 I 0.792
ONIVA04G12010 Oryza nivara ONIVA04G12010 I 0.792
ORUFI04G15040 Oryza rufipogon ORUFI04G15040 I 0.792
LPERR04G10680 Leersia perrieri LPERR04G10680 I 0.792
ORUFI04G15060 Oryza rufipogon ORUFI04G15060 I 0.792
OGLUM04G13550 Oryza glumaepatula OGLUM04G13550 I 0.792
OMERI04G12400 Oryza meridionalis OMERI04G12400 I 0.792
OLONG_023630 Oryza longistaminata OLONG_023630 I 0.792
OBART04G13800 Oryza barthii OBART04G13800 I 0.792
MDP0000316609 Malus domestica MDP0000316609 I 0.787
Lus10001277.g Linum usitatissimum Lus10001277.g I 0.787
Lus10009472.g Linum usitatissimum Lus10009472.g I 0.787
cassava6262.valid.m1 Manihot esculenta cassava6262.valid.m1 I 0.787
Pavir.Ga01731 Panicum virgatum Pavir.Ga01731 I 0.787
gene27105-v1.0-hybrid Fragaria vesca gene27105-v1.0-hybrid I 0.787
TRIUR3_02252 Triticum urartu TRIUR3_02252 I 0.771
OGLUM04G13520 Oryza glumaepatula OGLUM04G13520 I 0.771
MDP0000192806 Malus domestica MDP0000192806 I 0.771
OMERI04G12420 Oryza meridionalis OMERI04G12420 I 0.771
F775_05799 Aegilops tauschii F775_05799 I 0.771
MDP0000193953 Malus domestica MDP0000193953 I 0.771
OBART04G13770 Oryza barthii OBART04G13770 I 0.771
Traes_2DL_71F120931 Triticum aestivum Traes_2DL_71F120931 I 0.771
Traes_2BL_E0978B1BC Triticum aestivum Traes_2BL_E0978B1BC I 0.771
AGL12 Arabidopsis lyrata fgenesh2_kg.2__1419__AT1G71692.1 I 0.766
Carubv10020947m.g Capsella rubella Carubv10020947m.g I 0.766
Bo6g113110 Brassica oleracea Bo6g113110 I 0.766
Bra007972 Brassica rapa Bra007972 I 0.766
Cagra.2418s0012 Capsella grandiflora Cagra.2418s0012 I 0.766
Si024640m.g Setaria italica Si024640m.g I 0.766
AGL12 Arabidopsis thaliana AT1G71692 D 0.766
Sb06g017660 Sorghum bicolor Sb06g017660 I 0.766
Bo2g073010 Brassica oleracea Bo2g073010 I 0.766
Pavir.Ca00337 Panicum virgatum Pavir.Ca00337 I 0.766
Traes_4BL_9A17EA3B7 Triticum aestivum Traes_4BL_9A17EA3B7 I 0.759
OPUNC04G11660 Oryza punctata OPUNC04G11660 I 0.750
Bra016128 Brassica rapa Bra016128 I 0.750
BRADI4G40357 Brachypodium distachyon BRADI4G40357 I 0.745
Bostr.10273s0193 Boechera stricta Bostr.10273s0193 I 0.745
Cucsa.331900 Cucumis sativus Cucsa.331900 I 0.745
Bo6g094120 Brassica oleracea Bo6g094120 I 0.745
Thhalv10019132m.g Eutrema salsugineum Thhalv10019132m.g I 0.745
BRADI4G40940 Brachypodium distachyon BRADI4G40940 I 0.745
Bra003919 Brassica rapa Bra003919 I 0.745
PK27158.1 Cannabis sativa PK27158.1 I 0.743
GSMUA_Achr1G03630_001 Musa acuminata GSMUA_Achr1G03630_001 I 0.729
cassava26340.m1 Manihot esculenta cassava26340.m1 I 0.729
Gorai.008G018100 Gossypium raimondii Gorai.008G018100 I 0.729
SapurV1A.0019s1110 Salix purpurea SapurV1A.0019s1110 I 0.729
OPUNC09G14150 Oryza punctata OPUNC09G14150 I 0.727
evm.TU.supercontig_660.1 Carica papaya evm.TU.supercontig_660.1 I 0.723
Sb08g006430 Sorghum bicolor Sb08g006430 I 0.723
SapurV1A.2345s0030 Salix purpurea SapurV1A.2345s0030 I 0.708
SapurV1A.1370s0060 Salix purpurea SapurV1A.1370s0060 I 0.708
Pavir.J09556 Panicum virgatum Pavir.J09556 I 0.708
orange1.1g036652m.g Citrus sinensis orange1.1g036652m.g I 0.708
Lus10042918.g Linum usitatissimum Lus10042918.g I 0.708
TCM_007324 Theobroma cacao TCM_007324 I 0.708
Traes_1BL_B44C0D37C Triticum aestivum Traes_1BL_B44C0D37C I 0.708
Traes_1DL_6DA0DFC5B Triticum aestivum Traes_1DL_6DA0DFC5B I 0.708
TRIUR3_24724 Triticum urartu TRIUR3_24724 I 0.708
GLYMA08G06991 Glycine max GLYMA08G06991 I 0.708
Traes_1AL_5F5A87122 Triticum aestivum Traes_1AL_5F5A87122 I 0.708
Solyc05g012020.2 Solanum lycopersicum Solyc05g012020.2 D 0.708
MLOC_65843 Hordeum vulgare MLOC_65843 I 0.708
PGSC0003DMG400001938 Solanum tuberosum PGSC0003DMG400001938 I 0.708
GSMUA_Achr2G11820_001 Musa acuminata GSMUA_Achr2G11820_001 I 0.708
Solyc04g005320.2 Solanum lycopersicum Solyc04g005320.2 I 0.708
GSMUA_Achr5G10250_001 Musa acuminata GSMUA_Achr5G10250_001 I 0.708
F775_07497 Aegilops tauschii F775_07497 I 0.708
Carubv10015972m.g Capsella rubella Carubv10015972m.g I 0.708
Ciclev10032489m.g Citrus clementina Ciclev10032489m.g I 0.708
Eucgr.I02600 Eucalyptus grandis Eucgr.I02600 I 0.708
evm.TU.supercontig_3.196 Carica papaya evm.TU.supercontig_3.196 I 0.708
Cagra.3821s0004 Capsella grandiflora Cagra.3821s0004 I 0.708
Bostr.13083s0004 Boechera stricta Bostr.13083s0004 I 0.708
29804.m001536 Ricinus communis 29804.m001536 I 0.708
Ca_14956 Cicer arietinum Ca_14956 I 0.708
ANR1 Arabidopsis thaliana AT2G14210 I 0.708
BRADI4G06867 Brachypodium distachyon BRADI4G06867 I 0.708
Thhalv10022995m.g Eutrema salsugineum Thhalv10022995m.g I 0.702
Pavir.Ia02902 Panicum virgatum Pavir.Ia02902 I 0.702
Pm007034 Prunus mume Pm007034 I 0.702
mgf021543m Mimulus guttatus mgf021543m I 0.702
ANR1 Vitis vinifera VIT_18s0001g07900 I 0.702
Pavir.Ea03607 Panicum virgatum Pavir.Ea03607 I 0.702
PRUPE_ppa010679mg Prunus persica PRUPE_ppa010679mg I 0.702
Gorai.003G090800 Gossypium raimondii Gorai.003G090800 I 0.702
PK26778.1 Cannabis sativa PK26778.1 I 0.700