Traes_2DL_71F120931 (Triticum aestivum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Traes_2DL_71F120931 T256537_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL12
M10906_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL12_01 		0.833 0.833
MADS26
M10974_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS26_01 		0.771 0.771
Q40882_PETHY
M11003_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP11_01 		0.729 0.729
MADS50
M10968_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS50_01 		0.729 0.729
MLOC_61901
M10964_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BM8_01 		0.708 0.708
Q9ATE9_PETHY
M11012_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP20_01 		0.708 0.708
Q9ATE8_PETHY
M11011_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP21_01 		0.708 0.708
Q43616_PETHY
M11004_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP7_01 		0.708 0.708
Q40591_TOBAC
M11002_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS1_03 		0.708 0.708
Q9FR84_MAIZE
M10981_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS3_03 		0.708 0.708
Q41829_MAIZE
M10977_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ZAP1_02 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_2DL_71F120931.1 MADS box 10 57

Links

Other MADS box family TFs
Other Triticum aestivum TFs

226 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_2BL_E0978B1BC Triticum aestivum Traes_2BL_E0978B1BC I 1.000
TRIUR3_02252 Triticum urartu TRIUR3_02252 I 1.000
F775_05799 Aegilops tauschii F775_05799 I 1.000
BGIOSGA015023 Oryza indica BGIOSGA015023 I 0.967
LPERR04G10680 Leersia perrieri LPERR04G10680 I 0.958
OGLUM04G13550 Oryza glumaepatula OGLUM04G13550 I 0.958
OBART04G13800 Oryza barthii OBART04G13800 I 0.958
OBART04G13770 Oryza barthii OBART04G13770 I 0.958
OLONG_023630 Oryza longistaminata OLONG_023630 I 0.958
ONIVA04G12010 Oryza nivara ONIVA04G12010 I 0.958
ORUFI04G15060 Oryza rufipogon ORUFI04G15060 I 0.958
OMERI04G12400 Oryza meridionalis OMERI04G12400 I 0.958
ORUFI04G15040 Oryza rufipogon ORUFI04G15040 I 0.958
BGIOSGA015021 Oryza indica BGIOSGA015021 I 0.957
OB04G21020 Oryza brachyantha OB04G21020 I 0.957
OLONG_023633 Oryza longistaminata OLONG_023633 I 0.947
OGLUM04G13520 Oryza glumaepatula OGLUM04G13520 I 0.938
OPUNC04G11660 Oryza punctata OPUNC04G11660 I 0.938
OMERI04G12420 Oryza meridionalis OMERI04G12420 I 0.938
ONIVA04G11980 Oryza nivara ONIVA04G11980 I 0.933
Pavir.Gb01604 Panicum virgatum Pavir.Gb01604 I 0.915
Si012632m.g Setaria italica Si012632m.g I 0.915
BRADI5G11270 Brachypodium distachyon BRADI5G11270 I 0.915
Eucgr.F02956 Eucalyptus grandis Eucgr.F02956 I 0.896
cassava6262.valid.m1 Manihot esculenta cassava6262.valid.m1 I 0.894
Lus10001277.g Linum usitatissimum Lus10001277.g I 0.875
Pavir.Ga01731 Panicum virgatum Pavir.Ga01731 I 0.875
Gorai.013G135200 Gossypium raimondii Gorai.013G135200 I 0.875
Lus10009472.g Linum usitatissimum Lus10009472.g I 0.875
Ciclev10023354m.g Citrus clementina Ciclev10023354m.g I 0.875
GRMZM2G069370 Zea mays GRMZM2G069370 I 0.872
Bra016128 Brassica rapa Bra016128 I 0.854
POPTR_0013s10190 Populus trichocarpa POPTR_0013s10190 I 0.854
POPTR_0019s10540 Populus trichocarpa POPTR_0019s10540 I 0.854
Sb06g017660 Sorghum bicolor Sb06g017660 I 0.854
mgf017448m Mimulus guttatus mgf017448m I 0.854
evm.TU.supercontig_21.50 Carica papaya evm.TU.supercontig_21.50 I 0.854
Solyc11g032100.1 Solanum lycopersicum Solyc11g032100.1 I 0.854
orange1.1g028961m.g Citrus sinensis orange1.1g028961m.g I 0.854
PGSC0003DMG401018787 Solanum tuberosum PGSC0003DMG401018787 I 0.854
TCM_036568 Theobroma cacao TCM_036568 I 0.854
Pavir.J09556 Panicum virgatum Pavir.J09556 I 0.854
MTR_4g036050 Medicago truncatula MTR_4g036050 I 0.854
Ca_19954 Cicer arietinum Ca_19954 I 0.854
AGL12 Vitis vinifera VIT_18s0041g02140 I 0.854
Cla012709 Citrullus lanatus Cla012709 I 0.854
GLYMA12G00770 Glycine max GLYMA12G00770 I 0.854
SapurV1A.0945s0060 Salix purpurea SapurV1A.0945s0060 I 0.854
GLYMA09G36590 Glycine max GLYMA09G36590 I 0.854
Cucsa.061750 Cucumis sativus Cucsa.061750 I 0.854
SapurV1A.3049s0010 Salix purpurea SapurV1A.3049s0010 I 0.854
SapurV1A.0675s0070 Salix purpurea SapurV1A.0675s0070 I 0.854
cassava21127.m1 Manihot esculenta cassava21127.m1 I 0.854
GSMUA_Achr11G19350_001 Musa acuminata GSMUA_Achr11G19350_001 I 0.851
Bra003919 Brassica rapa Bra003919 I 0.851
Bo6g094120 Brassica oleracea Bo6g094120 I 0.851
MDP0000316609 Malus domestica MDP0000316609 I 0.833
Carubv10020947m.g Capsella rubella Carubv10020947m.g I 0.833
AGL12 Arabidopsis lyrata fgenesh2_kg.2__1419__AT1G71692.1 I 0.833
PDK_20s1439001g001 Phoenix dactylifera PDK_20s1439001g001 I 0.833
PDK_20s1302432g001 Phoenix dactylifera PDK_20s1302432g001 I 0.833
AGL12 Arabidopsis thaliana AT1G71692 D 0.833
BRADI3G13570 Brachypodium distachyon BRADI3G13570 I 0.833
Bo2g073010 Brassica oleracea Bo2g073010 I 0.833
Cagra.2418s0012 Capsella grandiflora Cagra.2418s0012 I 0.833
Bo6g113110 Brassica oleracea Bo6g113110 I 0.833
MDP0000192806 Malus domestica MDP0000192806 I 0.833
MDP0000193953 Malus domestica MDP0000193953 I 0.833
Bra007972 Brassica rapa Bra007972 I 0.833
PRUPE_ppa015966mg Prunus persica PRUPE_ppa015966mg I 0.830
PK26896.1 Cannabis sativa PK26896.1 I 0.830
Traes_7BL_9BCF391CF Triticum aestivum Traes_7BL_9BCF391CF I 0.830
Traes_7AL_67921A952 Triticum aestivum Traes_7AL_67921A952 I 0.830
Traes_7DL_CAF83263E Triticum aestivum Traes_7DL_CAF83263E I 0.830
GSMUA_Achr7G02960_001 Musa acuminata GSMUA_Achr7G02960_001 I 0.830
AMTR_s00071p00198970 Amborella trichopoda AMTR_s00071p00198970 I 0.830
LPERR08G01250 Leersia perrieri LPERR08G01250 I 0.830
MLOC_53973 Hordeum vulgare MLOC_53973 I 0.830
Pm004239 Prunus mume Pm004239 I 0.830
F775_26271 Aegilops tauschii F775_26271 I 0.830
OB08G11080 Oryza brachyantha OB08G11080 I 0.830
OPUNC08G01030 Oryza punctata OPUNC08G01030 I 0.830
Thhalv10019132m.g Eutrema salsugineum Thhalv10019132m.g I 0.830
TRIUR3_13653 Triticum urartu TRIUR3_13653 I 0.830
gene27105-v1.0-hybrid Fragaria vesca gene27105-v1.0-hybrid I 0.812
29907.m000663 Ricinus communis 29907.m000663 I 0.812
Bostr.10273s0193 Boechera stricta Bostr.10273s0193 I 0.812
Si014419m.g Setaria italica Si014419m.g I 0.792
GRMZM2G117961 Zea mays GRMZM2G117961 I 0.792
Sb07g001250 Sorghum bicolor Sb07g001250 I 0.792
Pavir.J40795 Panicum virgatum Pavir.J40795 I 0.792
Aquca_014_00077 Aquilegia coerulea Aquca_014_00077 I 0.787
GRMZM2G105387 Zea mays GRMZM2G105387 I 0.787
BGIOSGA027872 Oryza indica BGIOSGA027872 I 0.771
ORGLA08G0003200 Oryza glaberrima ORGLA08G0003200 I 0.771
ORUFI08G00950 Oryza rufipogon ORUFI08G00950 I 0.771
MADS26 Oryza sativa OS08G0112700 D 0.771
OBART08G00930 Oryza barthii OBART08G00930 I 0.771
OLONG_011815 Oryza longistaminata OLONG_011815 I 0.771
OGLUM08G00990 Oryza glumaepatula OGLUM08G00990 I 0.771
ONIVA08G00920 Oryza nivara ONIVA08G00920 I 0.771
Traes_4BL_9A17EA3B7 Triticum aestivum Traes_4BL_9A17EA3B7 I 0.759
Ciclev10005698m.g Citrus clementina Ciclev10005698m.g I 0.750
orange1.1g039982m.g Citrus sinensis orange1.1g039982m.g I 0.750
gene26118-v1.0-hybrid Fragaria vesca gene26118-v1.0-hybrid I 0.743
cassava3099.m1 Manihot esculenta cassava3099.m1 I 0.729
Aquca_013_00471 Aquilegia coerulea Aquca_013_00471 I 0.729
Q40882_PETHY Petunia x hybrida Q40882_PETHY D 0.729
Si038299m.g Setaria italica Si038299m.g I 0.729
Sb08g006430 Sorghum bicolor Sb08g006430 I 0.729
Si024640m.g Setaria italica Si024640m.g I 0.729
Si038257m.g Setaria italica Si038257m.g I 0.729
Sb01g030570 Sorghum bicolor Sb01g030570 I 0.729
POPTR_0002s15310 Populus trichocarpa POPTR_0002s15310 I 0.729
OPUNC04G22650 Oryza punctata OPUNC04G22650 I 0.729
Pavir.Ca00337 Panicum virgatum Pavir.Ca00337 I 0.729
LPERR03G01640 Leersia perrieri LPERR03G01640 I 0.729
GSMUA_Achr5G20280_001 Musa acuminata GSMUA_Achr5G20280_001 I 0.729
OB03G11760 Oryza brachyantha OB03G11760 I 0.729
OBART04G25610 Oryza barthii OBART04G25610 I 0.729
OLONG_010918 Oryza longistaminata OLONG_010918 I 0.729
OGLUM04G25090 Oryza glumaepatula OGLUM04G25090 I 0.729
OGLUM03G01750 Oryza glumaepatula OGLUM03G01750 I 0.729
GSMUA_Achr2G04340_001 Musa acuminata GSMUA_Achr2G04340_001 I 0.729
Pavir.J10823 Panicum virgatum Pavir.J10823 I 0.729
GRMZM2G070034 Zea mays GRMZM2G070034 I 0.729
GRMZM2G026223 Zea mays GRMZM2G026223 I 0.729
BRADI4G40357 Brachypodium distachyon BRADI4G40357 I 0.729
GRMZM2G171365 Zea mays GRMZM2G171365 I 0.729
SapurV1A.0024s0570 Salix purpurea SapurV1A.0024s0570 I 0.729
GSMUA_Achr11G21460_001 Musa acuminata GSMUA_Achr11G21460_001 I 0.729
Pavir.J22336 Panicum virgatum Pavir.J22336 I 0.729
OMERI03G01730 Oryza meridionalis OMERI03G01730 I 0.729
OBART03G01800 Oryza barthii OBART03G01800 I 0.729
BRADI4G40940 Brachypodium distachyon BRADI4G40940 I 0.729
BGIOSGA017110 Oryza indica BGIOSGA017110 I 0.729
ORUFI03G01510 Oryza rufipogon ORUFI03G01510 I 0.729
ORGLA04G0222300 Oryza glaberrima ORGLA04G0222300 I 0.729
ORGLA03G0015400 Oryza glaberrima ORGLA03G0015400 I 0.729
ORUFI04G26810 Oryza rufipogon ORUFI04G26810 I 0.729
OPUNC03G01630 Oryza punctata OPUNC03G01630 I 0.729
ONIVA03G01420 Oryza nivara ONIVA03G01420 I 0.729
OMERI04G20840 Oryza meridionalis OMERI04G20840 I 0.729
MADS31 Oryza sativa OS04G0614100 I 0.729
MADS50 Oryza sativa OS03G0122600 D 0.729
MDP0000179718 Malus domestica MDP0000179718 I 0.727
OPUNC09G14150 Oryza punctata OPUNC09G14150 I 0.722
SapurV1A.0578s0130 Salix purpurea SapurV1A.0578s0130 I 0.708
evm.TU.supercontig_3.196 Carica papaya evm.TU.supercontig_3.196 I 0.708
PK19764.1 Cannabis sativa PK19764.1 I 0.708
cassava40221.m1 Manihot esculenta cassava40221.m1 I 0.708
Lus10002763.g Linum usitatissimum Lus10002763.g I 0.708
Aquca_035_00266 Aquilegia coerulea Aquca_035_00266 I 0.708
MDP0000144516 Malus domestica MDP0000144516 I 0.708
cassava38700.m1 Manihot esculenta cassava38700.m1 I 0.708
Pavir.Ba03990 Panicum virgatum Pavir.Ba03990 I 0.708
Lus10036543.g Linum usitatissimum Lus10036543.g I 0.708
Pavir.Ia02902 Panicum virgatum Pavir.Ia02902 I 0.708
mgf009713m Mimulus guttatus mgf009713m I 0.708
MDP0000135652 Malus domestica MDP0000135652 I 0.708
Pavir.Bb00065 Panicum virgatum Pavir.Bb00065 I 0.708
mgf011060m Mimulus guttatus mgf011060m I 0.708
Ciclev10016427m.g Citrus clementina Ciclev10016427m.g I 0.708
mgf005317m Mimulus guttatus mgf005317m I 0.708
mgf006616m Mimulus guttatus mgf006616m I 0.708
mgf008635m Mimulus guttatus mgf008635m I 0.708
PGSC0003DMG400005176 Solanum tuberosum PGSC0003DMG400005176 I 0.708
MLOC_61901 Hordeum vulgare MLOC_61901 D 0.708
OB10G24040 Oryza brachyantha OB10G24040 I 0.708
LPERR10G12950 Leersia perrieri LPERR10G12950 I 0.708
LPERR07G18670 Leersia perrieri LPERR07G18670 I 0.708
LPERR04G20730 Leersia perrieri LPERR04G20730 I 0.708
LPERR07G00480 Leersia perrieri LPERR07G00480 I 0.708
OBART10G16960 Oryza barthii OBART10G16960 I 0.708
OGLUM10G16960 Oryza glumaepatula OGLUM10G16960 I 0.708
ONIVA10G18680 Oryza nivara ONIVA10G18680 I 0.708
OPUNC08G19670 Oryza punctata OPUNC08G19670 I 0.708
OMERI10G13430 Oryza meridionalis OMERI10G13430 I 0.708
OLONG_021245 Oryza longistaminata OLONG_021245 I 0.708
OLONG_017665 Oryza longistaminata OLONG_017665 I 0.708
GSMUA_Achr7G23690_001 Musa acuminata GSMUA_Achr7G23690_001 I 0.708
GSMUA_Achr3G25280_001 Musa acuminata GSMUA_Achr3G25280_001 I 0.708
F775_08627 Aegilops tauschii F775_08627 I 0.708
F775_52406 Aegilops tauschii F775_52406 I 0.708
BRADI2G57000 Brachypodium distachyon BRADI2G57000 I 0.708
BRADI2G25090 Brachypodium distachyon BRADI2G25090 I 0.708
MADS56 Oryza indica BGIOSGA033356 I 0.708
BRADI1G59250 Brachypodium distachyon BRADI1G59250 I 0.708
GLYMA08G06991 Glycine max GLYMA08G06991 I 0.708
GRMZM2G072582 Zea mays GRMZM2G072582 I 0.708
GSMUA_Achr11G19540_001 Musa acuminata GSMUA_Achr11G19540_001 I 0.708
GSMUA_Achr1G03630_001 Musa acuminata GSMUA_Achr1G03630_001 I 0.708
GSMUA_Achr10G21480_001 Musa acuminata GSMUA_Achr10G21480_001 I 0.708
GSMUA_Achr10G10990_001 Musa acuminata GSMUA_Achr10G10990_001 I 0.708
GRMZM2G148693 Zea mays GRMZM2G148693 I 0.708
ORGLA10G0119200 Oryza glaberrima ORGLA10G0119200 I 0.708
ORGLA12G0056500 Oryza glaberrima ORGLA12G0056500 I 0.708
Traes_2DL_903A29CBA Triticum aestivum Traes_2DL_903A29CBA I 0.708
Traes_4DL_5633C0561 Triticum aestivum Traes_4DL_5633C0561 I 0.708
Traes_2BL_26F24E716 Triticum aestivum Traes_2BL_26F24E716 I 0.708
Traes_2AL_20C2D79E1 Triticum aestivum Traes_2AL_20C2D79E1 I 0.708
Solyc11g028020.1 Solanum lycopersicum Solyc11g028020.1 I 0.708
TCM_015049 Theobroma cacao TCM_015049 I 0.708
TRIUR3_21876 Triticum urartu TRIUR3_21876 I 0.708
AGL18 Vitis vinifera VIT_08s0007g08790 I 0.708
Q43616_PETHY Petunia x hybrida Q43616_PETHY D 0.708
Q9ATE8_PETHY Petunia x hybrida Q9ATE8_PETHY D 0.708
Q40591_TOBAC Nicotiana tabacum Q40591_TOBAC D 0.708
Ca_16423 Cicer arietinum Ca_16423 I 0.708
STK Vitis vinifera VIT_18s0041g01880 I 0.708
Q9ATE9_PETHY Petunia x hybrida Q9ATE9_PETHY D 0.708
Solyc08g080100.2 Solanum lycopersicum Solyc08g080100.2 I 0.708
PGSC0003DMG400022748 Solanum tuberosum PGSC0003DMG400022748 I 0.708
PGSC0003DMG400025525 Solanum tuberosum PGSC0003DMG400025525 I 0.708
AMTR_s00071p00193200 Amborella trichopoda AMTR_s00071p00193200 I 0.708
PGSC0003DMG400000008 Solanum tuberosum PGSC0003DMG400000008 I 0.708
MADS56 Oryza sativa OS10G0536100 I 0.708
POPTR_0006s04730 Populus trichocarpa POPTR_0006s04730 I 0.708
Si030802m.g Setaria italica Si030802m.g I 0.708
Sb02g001090 Sorghum bicolor Sb02g001090 I 0.708
Si007187m.g Setaria italica Si007187m.g I 0.708
Q9FR84_MAIZE Zea mays Q9FR84_MAIZE D 0.708
Q41829_MAIZE Zea mays Q41829_MAIZE D 0.708
POPTR_0014s07020 Populus trichocarpa POPTR_0014s07020 I 0.708
ORUFI10G17990 Oryza rufipogon ORUFI10G17990 I 0.708
Traes_5BS_A19FD8E34 Triticum aestivum Traes_5BS_A19FD8E34 I 0.705