Traes_3DL_21C50DDF5 (Triticum aestivum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Traes_3DL_21C50DDF5 T332988_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_3DL_21C50DDF5.1 Sox 10 68

Links

Other Sox family TFs
Other Triticum aestivum TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.011G042300 Gossypium raimondii Gorai.011G042300 N 0.645
TRIUR3_17277 Triticum urartu TRIUR3_17277 N 0.599
cassava6450.valid.m1 Manihot esculenta cassava6450.valid.m1 N 0.597
PDK_20s1781681g001 Phoenix dactylifera PDK_20s1781681g001 N 0.537
Traes_7DL_0CEFCB39D Triticum aestivum Traes_7DL_0CEFCB39D N 0.533
Traes_7AL_364A6E96F Triticum aestivum Traes_7AL_364A6E96F N 0.533
Traes_7BL_F45C15FA2 Triticum aestivum Traes_7BL_F45C15FA2 N 0.533
MDP0000242568 Malus domestica MDP0000242568 I 0.510
F775_05073 Aegilops tauschii F775_05073 I 0.505
TRAES3BF031900060CFD_g Triticum aestivum TRAES3BF031900060CFD_g I 0.505
MLOC_7069 Hordeum vulgare MLOC_7069 N 0.495
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I 0.470
Gorai.002G115100 Gossypium raimondii Gorai.002G115100 I 0.470
LCUP018488 Lucilia cuprina LCUP018488 N 0.468
BRADI2G45927 Brachypodium distachyon BRADI2G45927 I 0.455
D917_08464 Trichinella nativa D917_08464 N 0.450
D917_01243 Trichinella nativa D917_01243 N 0.450
MLOC_68913 Hordeum vulgare MLOC_68913 N 0.448
DILT_0001977801 Diphyllobothrium latum DILT_0001977801 N 0.440
Pavir.J05892 Panicum virgatum Pavir.J05892 N 0.436
PredSwiss_CON4.1 Pneumocystis carinii PredSwiss_CON4.1 N 0.435
cassava7606.valid.m1 Manihot esculenta cassava7606.valid.m1 N 0.433
GLYMA05G25892 Glycine max GLYMA05G25892 N 0.432
TTAC_0000838901 Hydatigera taeniaeformis TTAC_0000838901 N 0.429
HMGB3 Arabidopsis thaliana AT1G20696 I 0.428
GLYMA20G01570 Glycine max GLYMA20G01570 N 0.426
gene00778-v1.0-hybrid Fragaria vesca gene00778-v1.0-hybrid N 0.425
GPLIN_000847800 Globodera pallida GPLIN_000847800 N 0.422
PDK_20s1434871g001 Phoenix dactylifera PDK_20s1434871g001 I 0.420
MDP0000143506 Malus domestica MDP0000143506 N 0.420
29693.m002035 Ricinus communis 29693.m002035 N 0.417
GSMUA_Achr4G07950_001 Musa acuminata GSMUA_Achr4G07950_001 N 0.415