BGIOSGA013832 (Oryza indica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 BGIOSGA013832 T081517_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.786 0.783
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.786 0.783
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.785 0.717
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.762 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA013832-PA C2H2 ZF 45 72
BGIOSGA013832-PA C2H2 ZF 100 122

Links

Other C2H2 ZF family TFs
Other Oryza indica TFs

377 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27810.m000639 Ricinus communis 27810.m000639 I 0.000
29729.m002292 Ricinus communis 29729.m002292 I 0.000
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.000
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.000
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.000
DREB2G Arabidopsis thaliana AT5G18450 D 0.000
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.000
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.000
Bo4g190040 Brassica oleracea Bo4g190040 I 0.000
Bo9g155940 Brassica oleracea Bo9g155940 I 0.000
Bo9g177130 Brassica oleracea Bo9g177130 I 0.000
Bostr.19424s1037 Boechera stricta Bostr.19424s1037 I 0.000
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.000
Bra002159 Brassica rapa Bra002159 I 0.000
Bra017011 Brassica rapa Bra017011 I 0.000
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.000
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.000
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.000
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.000
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.000
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.000
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.000
Ca_07264 Cicer arietinum Ca_07264 I 0.000
Ca_12446 Cicer arietinum Ca_12446 I 0.000
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.000
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.000
Cla006713 Citrullus lanatus Cla006713 I 0.000
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.000
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.000
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.000
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.000
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.000
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.000
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.000
e_gw1.292.36.1 Physcomitrella patens e_gw1.292.36.1 I 0.000
F775_05774 Aegilops tauschii F775_05774 I 0.000
F775_32062 Aegilops tauschii F775_32062 I 0.000
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.000
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.000
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.000
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.000
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.000
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.000
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.000
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.000
GLYMA14G32210 Glycine max GLYMA14G32210 I 0.000
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.000
Gorai.007G359400 Gossypium raimondii Gorai.007G359400 I 0.000
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.000
Gorai.011G235900 Gossypium raimondii Gorai.011G235900 I 0.000
GRMZM2G006745 Zea mays GRMZM2G006745 I 0.000
GRMZM2G156737 Zea mays GRMZM2G156737 I 0.000
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.000
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.000
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.000
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I 0.000
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.000
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.000
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.000
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.000
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.000
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.000
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.000
Lus10003581.g Linum usitatissimum Lus10003581.g I 0.000
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.000
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.000
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.000
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.000
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.000
MDP0000147009 Malus domestica MDP0000147009 I 0.000
MDP0000153866 Malus domestica MDP0000153866 I 0.000
MDP0000165880 Malus domestica MDP0000165880 I 0.000
MDP0000290585 Malus domestica MDP0000290585 I 0.000
MDP0000446783 Malus domestica MDP0000446783 I 0.000
MDP0000703626 Malus domestica MDP0000703626 I 0.000
MDP0000871361 Malus domestica MDP0000871361 I 0.000
MDP0000880312 Malus domestica MDP0000880312 I 0.000
mgf017629m Mimulus guttatus mgf017629m I 0.000
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.000
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.000
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.000
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.000
OBART01G04210 Oryza barthii OBART01G04210 I 0.000
OBART03G05550 Oryza barthii OBART03G05550 I 0.000
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.000
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.000
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.000
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.000
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.000
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.000
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.000
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.000
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.000
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.000
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.000
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.000
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.000
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.000
DREB2A Oryza sativa OS01G0165000 I 0.000
DREB2E Oryza sativa OS03G0174400 I 0.000
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I 0.000
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I 0.000
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.000
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.000
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.000
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.000
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.000
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.000
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.000
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.000
PK07402.1 Cannabis sativa PK07402.1 D 0.000
PK07829.1 Cannabis sativa PK07829.1 I 0.000
PK08602.1 Cannabis sativa PK08602.1 D 0.000
Pm003634 Prunus mume Pm003634 I 0.000
Pm015262 Prunus mume Pm015262 I 0.000
Pm018989 Prunus mume Pm018989 I 0.000
Pm025865 Prunus mume Pm025865 I 0.000
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.000
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.000
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.000
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.000
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.000
PRUPE_ppa009616mg Prunus persica PRUPE_ppa009616mg I 0.000
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.000
PRUPE_ppa022996mg Prunus persica PRUPE_ppa022996mg I 0.000
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.000
Q1ESI9_MAIZE Zea mays Q1ESI9_MAIZE D 0.000
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.000
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.000
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.000
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.000
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.000
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.000
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.000
Sb03g004980 Sorghum bicolor Sb03g004980 I 0.000
Sb09g016150 Sorghum bicolor Sb09g016150 I 0.000
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.000
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.000
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.000
Si002067m.g Setaria italica Si002067m.g I 0.000
Si022619m.g Setaria italica Si022619m.g I 0.000
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.000
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.000
TCM_024756 Theobroma cacao TCM_024756 I 0.000
TCM_043275 Theobroma cacao TCM_043275 I 0.000
TCM_043302 Theobroma cacao TCM_043302 I 0.000
TCM_043306 Theobroma cacao TCM_043306 I 0.000
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.000
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.000
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.000
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.000
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.000
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.000
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.000
Traes_5BL_7F0FD1538 Triticum aestivum Traes_5BL_7F0FD1538 I 0.000
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.000
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.000
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.000
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.000