chr2.CM1731.90.nc (Lotus japonicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 chr2.CM1731.90.nc T146053_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr2.CM1731.90.nc C2H2 ZF 206 227
chr2.CM1731.90.nc C2H2 ZF 227 252

Links

Other C2H2 ZF family TFs
Other Lotus japonicus TFs

253 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27810.m000651 Ricinus communis 27810.m000651 N 0.793
29908.m006047 Ricinus communis 29908.m006047 N 0.000
30055.m001542 Ricinus communis 30055.m001542 N 0.758
30061.m000294 Ricinus communis 30061.m000294 N 0.758
30169.m006417 Ricinus communis 30169.m006417 N 0.778
AMTR_s00022p00243980 Amborella trichopoda AMTR_s00022p00243980 N 0.793
AMTR_s00093p00164790 Amborella trichopoda AMTR_s00093p00164790 N 0.803
Aquca_004_00109 Aquilegia coerulea Aquca_004_00109 N 0.764
Aquca_006_00227 Aquilegia coerulea Aquca_006_00227 N 0.764
Aquca_026_00228 Aquilegia coerulea Aquca_026_00228 N 0.827
Aquca_040_00077 Aquilegia coerulea Aquca_040_00077 N 0.764
WIP6 Arabidopsis thaliana AT1G13290 N 0.797
WIP2 Arabidopsis thaliana AT3G57670 N 0.793
BGIOSGA023262 Oryza indica BGIOSGA023262 N 0.773
BGIOSGA030081 Oryza indica BGIOSGA030081 N 0.784
BGIOSGA030484 Oryza indica BGIOSGA030484 N 0.782
Bo4g111000 Brassica oleracea Bo4g111000 N 0.793
Bo5g015200 Brassica oleracea Bo5g015200 N 0.797
Bo6g073120 Brassica oleracea Bo6g073120 N 0.793
Bo8g092070 Brassica oleracea Bo8g092070 N 0.793
Bostr.13671s0117 Boechera stricta Bostr.13671s0117 N 0.797
Bostr.20903s0019 Boechera stricta Bostr.20903s0019 N 0.793
Bra003295 Brassica rapa Bra003295 N 0.793
Bra007346 Brassica rapa Bra007346 N 0.792
Bra014612 Brassica rapa Bra014612 N 0.793
Bra019822 Brassica rapa Bra019822 N 0.797
BRADI1G36067 Brachypodium distachyon BRADI1G36067 N 0.773
BRADI4G27770 Brachypodium distachyon BRADI4G27770 N 0.782
Cagra.0210s0004 Capsella grandiflora Cagra.0210s0004 N 0.793
Cagra.3501s0170 Capsella grandiflora Cagra.3501s0170 N 0.797
Carubv10012013m.g Capsella rubella Carubv10012013m.g N 0.797
Carubv10017428m.g Capsella rubella Carubv10017428m.g N 0.793
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N 0.758
cassava16214.m1 Manihot esculenta cassava16214.m1 N 0.758
cassava34009.m1 Manihot esculenta cassava34009.m1 N 0.773
cassava35956.valid.m1 Manihot esculenta cassava35956.valid.m1 N 0.793
cassava39829.m1 Manihot esculenta cassava39829.m1 N 0.764
cassava41737.m1 Manihot esculenta cassava41737.m1 N 0.793
cassava44390.m1 Manihot esculenta cassava44390.m1 N 0.000
cassava46219.m1 Manihot esculenta cassava46219.m1 N 0.803
cassava5227.m1 Manihot esculenta cassava5227.m1 N 0.784
Ca_07051 Cicer arietinum Ca_07051 N 0.758
Ca_07269 Cicer arietinum Ca_07269 N 0.793
Ca_08435 Cicer arietinum Ca_08435 N 0.803
Ca_16482 Cicer arietinum Ca_16482 N 0.000
Ca_21713 Cicer arietinum Ca_21713 N 0.797
Ca_24699 Cicer arietinum Ca_24699 N 0.827
chr1.CM0318.720.nd Lotus japonicus chr1.CM0318.720.nd N 0.793
chr3.CM1144.10.nc Lotus japonicus chr3.CM1144.10.nc N 0.000
Ciclev10003648m.g Citrus clementina Ciclev10003648m.g N 0.000
Ciclev10005189m.g Citrus clementina Ciclev10005189m.g N 0.793
Ciclev10017716m.g Citrus clementina Ciclev10017716m.g N 0.787
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N 0.758
Ciclev10033535m.g Citrus clementina Ciclev10033535m.g N 0.818
Cla000184 Citrullus lanatus Cla000184 N 0.000
Cla002714 Citrullus lanatus Cla002714 N 0.803
Cla008187 Citrullus lanatus Cla008187 N 0.793
Cla008675 Citrullus lanatus Cla008675 N 0.787
Cla015481 Citrullus lanatus Cla015481 N 0.758
Cucsa.050260 Cucumis sativus Cucsa.050260 N 0.758
Cucsa.065460 Cucumis sativus Cucsa.065460 N 0.758
Cucsa.199850 Cucumis sativus Cucsa.199850 N 0.000
Cucsa.242970 Cucumis sativus Cucsa.242970 N 0.793
Cucsa.248320 Cucumis sativus Cucsa.248320 N 0.803
Cucsa.357260 Cucumis sativus Cucsa.357260 N 0.793
Eucgr.A02400 Eucalyptus grandis Eucgr.A02400 N 0.793
Eucgr.B03047 Eucalyptus grandis Eucgr.B03047 N 0.803
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N 0.758
Eucgr.J00788 Eucalyptus grandis Eucgr.J00788 N 0.797
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N 0.758
evm.TU.supercontig_1.215 Carica papaya evm.TU.supercontig_1.215 N 0.803
evm.TU.supercontig_84.74 Carica papaya evm.TU.supercontig_84.74 N 0.793
e_gw1.203.23.1 Physcomitrella patens e_gw1.203.23.1 N 0.797
NTT Arabidopsis lyrata fgenesh2_kg.5__2209__AT3G57670.1 N 0.793
gene03867-v1.0-hybrid Fragaria vesca gene03867-v1.0-hybrid N 0.794
gene14361-v1.0-hybrid Fragaria vesca gene14361-v1.0-hybrid N 0.793
gene20598-v1.0-hybrid Fragaria vesca gene20598-v1.0-hybrid N 0.787
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N 0.758
GLYMA01G22120 Glycine max GLYMA01G22120 N 0.827
GLYMA02G10970 Glycine max GLYMA02G10970 N 0.827
GLYMA02G31270 Glycine max GLYMA02G31270 N 0.793
GLYMA08G16390 Glycine max GLYMA08G16390 N 0.758
GLYMA10G34770 Glycine max GLYMA10G34770 N 0.797
GLYMA11G19060 Glycine max GLYMA11G19060 N 0.758
GLYMA12G09400 Glycine max GLYMA12G09400 N 0.758
GLYMA12G30930 Glycine max GLYMA12G30930 N 0.758
GLYMA12G36660 Glycine max GLYMA12G36660 N 0.758
GLYMA13G27371 Glycine max GLYMA13G27371 N 0.758
GLYMA13G39370 Glycine max GLYMA13G39370 N 0.758
GLYMA15G42870 Glycine max GLYMA15G42870 N 0.758
GLYMA19G32430 Glycine max GLYMA19G32430 N 0.793
GLYMA20G32750 Glycine max GLYMA20G32750 N 0.797
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N 0.758
Gorai.002G152600 Gossypium raimondii Gorai.002G152600 N 0.793
Gorai.003G089200 Gossypium raimondii Gorai.003G089200 N 0.793
Gorai.004G037000 Gossypium raimondii Gorai.004G037000 N 0.764
Gorai.004G065400 Gossypium raimondii Gorai.004G065400 N 0.764
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N 0.758
Gorai.006G138700 Gossypium raimondii Gorai.006G138700 N 0.787
Gorai.007G177300 Gossypium raimondii Gorai.007G177300 N 0.764
Gorai.010G039600 Gossypium raimondii Gorai.010G039600 N 0.000
Gorai.013G080100 Gossypium raimondii Gorai.013G080100 N 0.803
Gorai.013G250800 Gossypium raimondii Gorai.013G250800 N 0.797
GRMZM2G061545 Zea mays GRMZM2G061545 N 0.797
GRMZM2G150011 Zea mays GRMZM2G150011 N 0.782
GRMZM2G435357 Zea mays GRMZM2G435357 N 0.773
GRMZM2G436344 Zea mays GRMZM2G436344 N 0.773
GSMUA_Achr11G18950_001 Musa acuminata GSMUA_Achr11G18950_001 N 0.768
GSMUA_Achr3G03850_001 Musa acuminata GSMUA_Achr3G03850_001 N 0.764
GSMUA_Achr3G11870_001 Musa acuminata GSMUA_Achr3G11870_001 N 0.797
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N 0.000
GSMUA_Achr5G26210_001 Musa acuminata GSMUA_Achr5G26210_001 N 0.768
GSMUA_Achr6G01410_001 Musa acuminata GSMUA_Achr6G01410_001 N 0.788
GSMUA_Achr6G03470_001 Musa acuminata GSMUA_Achr6G03470_001 N 0.784
GSMUA_Achr8G25650_001 Musa acuminata GSMUA_Achr8G25650_001 N 0.770
GSMUA_Achr9G12600_001 Musa acuminata GSMUA_Achr9G12600_001 N 0.758
GSMUA_AchrUn_randomG20320_001 Musa acuminata GSMUA_AchrUn_randomG20320_001 N 0.793
GSMUA_AchrUn_randomG22660_001 Musa acuminata GSMUA_AchrUn_randomG22660_001 N 0.787
gw1.359.34.1 Physcomitrella patens gw1.359.34.1 N 0.797
LPERR06G17470 Leersia perrieri LPERR06G17470 N 0.773
LPERR09G03450 Leersia perrieri LPERR09G03450 N 0.782
Lus10004887.g Linum usitatissimum Lus10004887.g N 0.758
Lus10020597.g Linum usitatissimum Lus10020597.g N 0.758
Lus10021700.g Linum usitatissimum Lus10021700.g N 0.827
Lus10029525.g Linum usitatissimum Lus10029525.g N 0.000
Lus10031271.g Linum usitatissimum Lus10031271.g N 0.788
Lus10031838.g Linum usitatissimum Lus10031838.g N 0.788
Lus10035044.g Linum usitatissimum Lus10035044.g N 0.827
Lus10039613.g Linum usitatissimum Lus10039613.g N 0.000
MDP0000131949 Malus domestica MDP0000131949 N 0.758
MDP0000142494 Malus domestica MDP0000142494 N 0.000
MDP0000144266 Malus domestica MDP0000144266 N 0.000
MDP0000300013 Malus domestica MDP0000300013 N 0.758
MDP0000303483 Malus domestica MDP0000303483 N 0.827
MDP0000403797 Malus domestica MDP0000403797 N 0.787
MDP0000573922 Malus domestica MDP0000573922 N 0.000
MDP0000580545 Malus domestica MDP0000580545 N 0.787
MDP0000601705 Malus domestica MDP0000601705 N 0.793
MDP0000899280 Malus domestica MDP0000899280 N 0.818
mgf019910m Mimulus guttatus mgf019910m N 0.787
mgf022319m Mimulus guttatus mgf022319m N 0.758
MLOC_54308 Hordeum vulgare MLOC_54308 N 0.782
MLOC_65351 Hordeum vulgare MLOC_65351 N 0.797
MTR_1g093095 Medicago truncatula MTR_1g093095 N 0.803
OB06G28740 Oryza brachyantha OB06G28740 N 0.773
OBART06G20890 Oryza barthii OBART06G20890 N 0.797
OBART09G03640 Oryza barthii OBART09G03640 N 0.784
OGLUM06G22000 Oryza glumaepatula OGLUM06G22000 N 0.773
OGLUM09G04400 Oryza glumaepatula OGLUM09G04400 N 0.784
OGLUM09G05550 Oryza glumaepatula OGLUM09G05550 N 0.782
OMERI09G02890 Oryza meridionalis OMERI09G02890 N 0.784
OMERI09G03940 Oryza meridionalis OMERI09G03940 N 0.782
ONIVA02G14580 Oryza nivara ONIVA02G14580 N 0.784
ONIVA06G24670 Oryza nivara ONIVA06G24670 N 0.773
ONIVA08G08420 Oryza nivara ONIVA08G08420 N 0.782
OPUNC06G19020 Oryza punctata OPUNC06G19020 N 0.773
OPUNC09G03280 Oryza punctata OPUNC09G03280 N 0.784
OPUNC09G04260 Oryza punctata OPUNC09G04260 N 0.782
orange1.1g019587m.g Citrus sinensis orange1.1g019587m.g N 0.787
orange1.1g037179m.g Citrus sinensis orange1.1g037179m.g N 0.000
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N 0.758
orange1.1g040794m.g Citrus sinensis orange1.1g040794m.g N 0.793
orange1.1g046329m.g Citrus sinensis orange1.1g046329m.g N 0.818
ORGLA06G0173600 Oryza glaberrima ORGLA06G0173600 N 0.773
ORGLA09G0176200 Oryza glaberrima ORGLA09G0176200 N 0.784
ORUFI06G22350 Oryza rufipogon ORUFI06G22350 N 0.773
ORUFI09G04060 Oryza rufipogon ORUFI09G04060 N 0.784
ORUFI09G05390 Oryza rufipogon ORUFI09G05390 N 0.782
OS06G0612300 Oryza sativa OS06G0612300 N 0.773
OS09G0307400 Oryza sativa OS09G0307400 N 0.782
Pavir.Ba03009 Panicum virgatum Pavir.Ba03009 N 0.782
Pavir.Db00765 Panicum virgatum Pavir.Db00765 N 0.773
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N 0.000
PGSC0003DMG400007112 Solanum tuberosum PGSC0003DMG400007112 N 0.764
PGSC0003DMG400013609 Solanum tuberosum PGSC0003DMG400013609 N 0.787
PGSC0003DMG400030271 Solanum tuberosum PGSC0003DMG400030271 N 0.793
PGSC0003DMG400046144 Solanum tuberosum PGSC0003DMG400046144 N 0.793
PK03705.1 Cannabis sativa PK03705.1 N 0.793
Pm000471 Prunus mume Pm000471 N 0.787
Pm001374 Prunus mume Pm001374 N 0.758
Pm025853 Prunus mume Pm025853 N 0.793
Pm029018 Prunus mume Pm029018 N 0.827
POPTR_0001s27490 Populus trichocarpa POPTR_0001s27490 N 0.764
POPTR_0002s09840 Populus trichocarpa POPTR_0002s09840 N 0.000
POPTR_0003s20400 Populus trichocarpa POPTR_0003s20400 N 0.778
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N 0.758
POPTR_0009s06700 Populus trichocarpa POPTR_0009s06700 N 0.764
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N 0.758
POPTR_0010s13910 Populus trichocarpa POPTR_0010s13910 N 0.827
POPTR_0016s05310 Populus trichocarpa POPTR_0016s05310 N 0.793
PRUPE_ppa008185mg Prunus persica PRUPE_ppa008185mg N 0.793
PRUPE_ppa020013m2g Prunus persica PRUPE_ppa020013m2g N 0.827
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N 0.758
PRUPE_ppa024429mg Prunus persica PRUPE_ppa024429mg N 0.787
SapurV1A.0009s0540 Salix purpurea SapurV1A.0009s0540 N 0.778
SapurV1A.0018s0090 Salix purpurea SapurV1A.0018s0090 N 0.793
SapurV1A.0027s0280 Salix purpurea SapurV1A.0027s0280 N 0.000
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N 0.758
SapurV1A.0219s0040 Salix purpurea SapurV1A.0219s0040 N 0.758
SapurV1A.0445s0120 Salix purpurea SapurV1A.0445s0120 N 0.000
SapurV1A.0445s0140 Salix purpurea SapurV1A.0445s0140 N 0.000
Sb02g020840 Sorghum bicolor Sb02g020840 N 0.782
Sb10g024040 Sorghum bicolor Sb10g024040 N 0.773
SELMODRAFT_110681 Selaginella moellendorffii SELMODRAFT_110681 N 0.797
SELMODRAFT_128378 Selaginella moellendorffii SELMODRAFT_128378 N 0.797
SELMODRAFT_36986 Selaginella moellendorffii SELMODRAFT_36986 N 0.797
SELMODRAFT_36987 Selaginella moellendorffii SELMODRAFT_36987 N 0.797
SELMODRAFT_57106 Selaginella moellendorffii SELMODRAFT_57106 N 0.803
SELMODRAFT_57114 Selaginella moellendorffii SELMODRAFT_57114 N 0.803
Si006616m.g Setaria italica Si006616m.g N 0.773
Si030360m.g Setaria italica Si030360m.g N 0.782
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N 0.000
Solyc05g009770.1 Solanum lycopersicum Solyc05g009770.1 N 0.793
Solyc11g062060.1 Solanum lycopersicum Solyc11g062060.1 N 0.787
TCM_005892 Theobroma cacao TCM_005892 N 0.764
TCM_011858 Theobroma cacao TCM_011858 N 0.827
TCM_024788 Theobroma cacao TCM_024788 N 0.793
TCM_034881 Theobroma cacao TCM_034881 N 0.000
TCM_040610 Theobroma cacao TCM_040610 N 0.797
TCM_041441 Theobroma cacao TCM_041441 N 0.758
Thhalv10006035m.g Eutrema salsugineum Thhalv10006035m.g N 0.793
Thhalv10009489m.g Eutrema salsugineum Thhalv10009489m.g N 0.797
Traes_5BL_46BDE583B Triticum aestivum Traes_5BL_46BDE583B N 0.782
Traes_5DL_98FA0887C Triticum aestivum Traes_5DL_98FA0887C N 0.782
Traes_7AL_1070DBD71 Triticum aestivum Traes_7AL_1070DBD71 N 0.797
TRIUR3_23735 Triticum urartu TRIUR3_23735 N 0.797
TRIUR3_30537 Triticum urartu TRIUR3_30537 N 0.782
DOT5 Vitis vinifera VIT_01s0011g03100 N 0.803
VIT_06s0004g01870 Vitis vinifera VIT_06s0004g01870 N 0.763
WIP3 Vitis vinifera VIT_06s0080g00270 N 0.758
NTT Vitis vinifera VIT_08s0007g08070 N 0.793
TT1 Vitis vinifera VIT_18s0001g05860 N 0.000