Ciclev10015261m.g (Citrus clementina)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 Ciclev10015261m.g T175338_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EIL3
M00723_2.00 		Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN		 PBM
Chang et al.(2013)
pTH7933 		0.830 0.830
EIL3
M06877_2.00 		Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN		 Dap-seq
OMalley et al.(2016)
EIL3_col_b 		0.830 0.830
OS09G0490200
M01970_2.00 		Oryza sativa
NMGRTACATNN
NNATGTAYCKN		 PBM
Weirauch et al.(2014)
pTH9013 		0.814 0.814
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.741 0.741
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.717 0.717
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.709 0.709
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.709 0.709
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.709 0.709
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10015261m EIN3 37 285

Links

Other EIN3 family TFs
Other Citrus clementina TFs

198 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29708.m000185 Ricinus communis 29708.m000185 I 0.713
30169.m006395 Ricinus communis 30169.m006395 I 0.927
AC234203.1_FG011 Zea mays AC234203.1_FG011 I 0.723
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.810
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.737
Aquca_007_00017 Aquilegia coerulea Aquca_007_00017 I 0.870
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.713
EIL3 Arabidopsis thaliana AT1G73730 D 0.833
EIL1 Arabidopsis thaliana AT2G27050 D 0.700
EIN3 Arabidopsis thaliana AT3G20770 D 0.709
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.721
BGIOSGA029545 Oryza indica BGIOSGA029545 I 0.814
Bo1g108650 Brassica oleracea Bo1g108650 I 0.704
Bo3g041690 Brassica oleracea Bo3g041690 I 0.700
Bo5g106280 Brassica oleracea Bo5g106280 I 0.702
Bo6g087550 Brassica oleracea Bo6g087550 I 0.822
Bo6g118030 Brassica oleracea Bo6g118030 I 0.829
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.711
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.700
Bostr.3288s0016 Boechera stricta Bostr.3288s0016 I 0.822
Bra000528 Brassica rapa Bra000528 I 0.704
Bra003831 Brassica rapa Bra003831 I 0.744
Bra008110 Brassica rapa Bra008110 I 0.814
Bra015970 Brassica rapa Bra015970 I 0.823
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.717
BRADI3G39970 Brachypodium distachyon BRADI3G39970 I 0.713
BRADI4G33750 Brachypodium distachyon BRADI4G33750 I 0.769
Cagra.0876s0005 Capsella grandiflora Cagra.0876s0005 I 0.830
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.711
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.704
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.711
Carubv10020043m.g Capsella rubella Carubv10020043m.g I 0.830
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.704
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.915
cassava30700.valid.m1 Manihot esculenta cassava30700.valid.m1 I 0.862
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.721
Ca_02669 Cicer arietinum Ca_02669 I 0.939
Ca_07534 Cicer arietinum Ca_07534 I 0.703
Ca_10236 Cicer arietinum Ca_10236 I 0.704
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.717
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.935
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.715
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.715
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.709
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.715
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.939
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.717
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.903
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.704
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.728
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.717
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.749
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.741
F775_17920 Aegilops tauschii F775_17920 I 0.777
F775_28545 Aegilops tauschii F775_28545 I 0.705
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.720
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.709
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.703
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.923
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.713
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.704
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.713
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.709
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.911
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.713
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.923
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.717
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.713
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.709
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.887
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.717
Gorai.010G128700 Gossypium raimondii Gorai.010G128700 I 0.883
Gorai.013G250300 Gossypium raimondii Gorai.013G250300 I 0.789
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.700
GRMZM2G006752 Zea mays GRMZM2G006752 I 0.753
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.709
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.717
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.700
GSMUA_Achr3G11160_001 Musa acuminata GSMUA_Achr3G11160_001 I 0.802
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.704
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.704
GSMUA_Achr8G25580_001 Musa acuminata GSMUA_Achr8G25580_001 I 0.789
GSMUA_Achr9G27680_001 Musa acuminata GSMUA_Achr9G27680_001 I 0.810
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.717
LPERR08G16890 Leersia perrieri LPERR08G16890 I 0.749
LPERR09G10870 Leersia perrieri LPERR09G10870 I 0.771
Lus10031245.g Linum usitatissimum Lus10031245.g I 0.899
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.887
MDP0000202831 Malus domestica MDP0000202831 I 0.713
MDP0000212881 Malus domestica MDP0000212881 I 0.707
MDP0000306498 Malus domestica MDP0000306498 I 0.700
MDP0000490180 Malus domestica MDP0000490180 I 0.943
MDP0000562585 Malus domestica MDP0000562585 I 0.923
MDP0000564884 Malus domestica MDP0000564884 I 0.707
MDP0000565880 Malus domestica MDP0000565880 I 0.923
mgf018950m Mimulus guttatus mgf018950m I 0.704
mgf020935m Mimulus guttatus mgf020935m I 0.874
MLOC_10315 Hordeum vulgare MLOC_10315 I 0.735
MLOC_10823 Hordeum vulgare MLOC_10823 I 0.781
MLOC_14619 Hordeum vulgare MLOC_14619 I 0.705
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.911
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.709
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.709
OB08G26880 Oryza brachyantha OB08G26880 I 0.737
OB09G21280 Oryza brachyantha OB09G21280 I 0.775
OBART08G19960 Oryza barthii OBART08G19960 I 0.733
OBART09G14750 Oryza barthii OBART09G14750 I 0.818
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.721
OGLUM08G21190 Oryza glumaepatula OGLUM08G21190 I 0.737
OGLUM09G15380 Oryza glumaepatula OGLUM09G15380 I 0.818
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.721
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.727
OMERI08G16770 Oryza meridionalis OMERI08G16770 I 0.733
OMERI09G11470 Oryza meridionalis OMERI09G11470 I 0.814
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.721
ONIVA08G17420 Oryza nivara ONIVA08G17420 I 0.818
ONIVA08G22530 Oryza nivara ONIVA08G22530 I 0.727
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.721
OPUNC08G18080 Oryza punctata OPUNC08G18080 I 0.731
OPUNC09G13210 Oryza punctata OPUNC09G13210 I 0.810
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.709
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.715
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 1.000
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.715
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.721
ORGLA09G0113600 Oryza glaberrima ORGLA09G0113600 I 0.818
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.721
ORUFI08G22370 Oryza rufipogon ORUFI08G22370 I 0.733
ORUFI09G15900 Oryza rufipogon ORUFI09G15900 I 0.814
OS03G0324200 Oryza sativa OS03G0324200 I 0.709
OS03G0324300 Oryza sativa OS03G0324300 I 0.709
OS08G0508700 Oryza sativa OS08G0508700 I 0.733
OS09G0490200 Oryza sativa OS09G0490200 D 0.814
Pavir.Fa00424 Panicum virgatum Pavir.Fa00424 I 0.731
Pavir.Fb01951 Panicum virgatum Pavir.Fb01951 I 0.741
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.709
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.725
Pavir.J02229 Panicum virgatum Pavir.J02229 I 0.759
Pavir.J14329 Panicum virgatum Pavir.J14329 I 0.765
PDK_20s1301801g002 Phoenix dactylifera PDK_20s1301801g002 I 0.798
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.717
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.704
PGSC0003DMG400021381 Solanum tuberosum PGSC0003DMG400021381 I 0.830
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.713
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.903
PK01239.1 Cannabis sativa PK01239.1 I 0.700
PK13351.1 Cannabis sativa PK13351.1 I 0.717
PK19114.1 Cannabis sativa PK19114.1 I 0.939
Pm017009 Prunus mume Pm017009 I 0.700
Pm028171 Prunus mume Pm028171 I 0.931
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.931
POPTR_0001s05370 Populus trichocarpa POPTR_0001s05370 I 0.775
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.927
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.711
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.700
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.707
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.700
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.931
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.704
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.717
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.927
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.703
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.704
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.700
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.724
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.923
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.721
Sb02g028390 Sorghum bicolor Sb02g028390 I 0.755
Sb07g027790 Sorghum bicolor Sb07g027790 I 0.727
EIL3 Arabidopsis lyrata scaffold_202309.1 I 0.834
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.755
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.755
SELMODRAFT_449238 Selaginella moellendorffii SELMODRAFT_449238 I 0.709
Si013426m.g Setaria italica Si013426m.g I 0.749
Si029259m.g Setaria italica Si029259m.g I 0.781
Si034616m.g Setaria italica Si034616m.g I 0.725
Solyc01g006650.1 Solanum lycopersicum Solyc01g006650.1 I 0.834
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.707
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.899
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.715
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.717
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.704
TCM_040510 Theobroma cacao TCM_040510 I 0.915
TCM_042022 Theobroma cacao TCM_042022 I 0.732
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.709
Thhalv10018327m.g Eutrema salsugineum Thhalv10018327m.g I 0.837
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.707
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I 0.705
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.749
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.721
Traes_5AL_B65EF5518 Triticum aestivum Traes_5AL_B65EF5518 I 0.773
Traes_5BL_B6051DD37 Triticum aestivum Traes_5BL_B6051DD37 I 0.777
Traes_7AS_34D476D5D1 Triticum aestivum Traes_7AS_34D476D5D1 I 0.733
Traes_7BS_733347AC0 Triticum aestivum Traes_7BS_733347AC0 I 0.735
Traes_7DS_3673F1C73 Triticum aestivum Traes_7DS_3673F1C73 I 0.735
TRIUR3_28079 Triticum urartu TRIUR3_28079 I 0.733
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.911
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.715