OGLUM08G25470 (Oryza glumaepatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OGLUM08G25470 T003305_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q1ESI9_MAIZE
M09714_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB2A_02 		0.701 0.816
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.686 0.816
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.682 0.816
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.682 0.816
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.682 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM08G25470.1 AP2 54 105

Links

Other AP2 family TFs
Other Oryza glumaepatula TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DREB2G Arabidopsis thaliana AT5G18450 D 0.686
Q1ESI9_MAIZE Zea mays Q1ESI9_MAIZE D 0.701
DREB2D Arabidopsis thaliana AT1G75490 D 0.682
Pm018989 Prunus mume Pm018989 I 0.714
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.690
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.682
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.690
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.682
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.686
Bostr.23794s0027 Boechera stricta Bostr.23794s0027 I 0.702
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.730
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.724
mgf017629m Mimulus guttatus mgf017629m I 0.697
Cucsa.231820 Cucumis sativus Cucsa.231820 I 0.719
Cucsa.119440 Cucumis sativus Cucsa.119440 I 0.684
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.698
Pm003634 Prunus mume Pm003634 I 0.696
Cla022803 Citrullus lanatus Cla022803 I 0.719
Cla001755 Citrullus lanatus Cla001755 I 0.684
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.677
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.698
Traes_2DL_B32203C91 Triticum aestivum Traes_2DL_B32203C91 I 0.783
Traes_2BL_B397F2CE3 Triticum aestivum Traes_2BL_B397F2CE3 I 0.790
Traes_2AL_3FB37A3E7 Triticum aestivum Traes_2AL_3FB37A3E7 I 0.763
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.698
chr1.CM0195.510.nd Lotus japonicus chr1.CM0195.510.nd I 0.715
Lus10010632.g Linum usitatissimum Lus10010632.g I 0.718
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.682
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.686
Pavir.J25464 Panicum virgatum Pavir.J25464 I 0.783
Pavir.J22169 Panicum virgatum Pavir.J22169 I 0.783
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I 0.696
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I 0.696
MDP0000446783 Malus domestica MDP0000446783 I 0.714
MDP0000250924 Malus domestica MDP0000250924 I 0.678
MDP0000165880 Malus domestica MDP0000165880 I 0.716
MDP0000147009 Malus domestica MDP0000147009 I 0.714
Lus10024298.g Linum usitatissimum Lus10024298.g I 0.718
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.682
Lus10006127.g Linum usitatissimum Lus10006127.g I 0.718
Lus10003581.g Linum usitatissimum Lus10003581.g I 0.686
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.687
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.695
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.707
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.700
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.677
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.691
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.695
Eucgr.F01607 Eucalyptus grandis Eucgr.F01607 I 0.713
Ciclev10022244m.g Citrus clementina Ciclev10022244m.g I 0.736
F775_01779 Aegilops tauschii F775_01779 I 0.769
MLOC_12223 Hordeum vulgare MLOC_12223 I 0.781
LPERR08G20650 Leersia perrieri LPERR08G20650 I 0.801
LPERR08G12790 Leersia perrieri LPERR08G12790 I 0.775
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.711
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I 0.696
GRMZM2G156737 Zea mays GRMZM2G156737 I 0.731
GRMZM2G028386 Zea mays GRMZM2G028386 I 0.721
GRMZM2G006745 Zea mays GRMZM2G006745 I 0.701
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.682
F775_32062 Aegilops tauschii F775_32062 I 0.698
F775_02345 Aegilops tauschii F775_02345 I 0.783
MLOC_66580 Hordeum vulgare MLOC_66580 I 0.783
BRADI3G12680 Brachypodium distachyon BRADI3G12680 I 0.790
Bra015840 Brassica rapa Bra015840 I 0.682
Bra008200 Brassica rapa Bra008200 I 0.683
Bra003752 Brassica rapa Bra003752 I 0.678
Bra002159 Brassica rapa Bra002159 I 0.686
Bo9g155940 Brassica oleracea Bo9g155940 I 0.686
Bo6g119660 Brassica oleracea Bo6g119660 I 0.682
Bo6g086320 Brassica oleracea Bo6g086320 I 0.678
Bo2g083920 Brassica oleracea Bo2g083920 I 0.683
BGIOSGA026464 Oryza indica BGIOSGA026464 I 0.816
BGIOSGA026461 Oryza indica BGIOSGA026461 I 0.816
PRUPE_ppa022996mg Prunus persica PRUPE_ppa022996mg I 0.698
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.685
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.713
Si024059m.g Setaria italica Si024059m.g I 0.783
Si022619m.g Setaria italica Si022619m.g I 0.696
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.686
Sb09g016150 Sorghum bicolor Sb09g016150 I 0.701
Sb07g023575 Sorghum bicolor Sb07g023575 I 0.718
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.700
TCM_026121 Theobroma cacao TCM_026121 I 0.725
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.714
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.713
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.685
DREB2C Oryza sativa OS08G0565200 I 0.816
ORUFI08G26490 Oryza rufipogon ORUFI08G26490 I 0.816
ORGLA08G0193700 Oryza glaberrima ORGLA08G0193700 I 0.816
OPUNC08G21890 Oryza punctata OPUNC08G21890 I 0.816
ONIVA09G01190 Oryza nivara ONIVA09G01190 I 0.816
OMERI08G18820 Oryza meridionalis OMERI08G18820 I 0.816
OB08G30790 Oryza brachyantha OB08G30790 I 0.816
MTR_3g112440 Medicago truncatula MTR_3g112440 I 0.681
SELMODRAFT_38498 Selaginella moellendorffii SELMODRAFT_38498 N 0.688
SELMODRAFT_38500 Selaginella moellendorffii SELMODRAFT_38500 N 0.688
TRIUR3_03342 Triticum urartu TRIUR3_03342 N 0.756