CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SEPMUDRAFT_146214
(
Sphaerulina musiva
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
SEPMUDRAFT_146214
T044639_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_01298
M01112_2.00
Aspergillus nidulans
BCACGTGAYN
NRTCACGTGV
PBM
Lambert et al.(2019)
pEX0385
0.840
0.833
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMF17121
bHLH
302
405
RRESHNMVERRRRDNINERIQDLGTLVPQHRLEDEKVRKHLQTNAPLSPSIANSGMSPPNASLLGTSARRAAGNITQGLPLEEKDKGPNKGDILNGSVAWTRDM
Links
Other
bHLH
family TFs
Other
Sphaerulina musiva
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00088p00161000
Amborella trichopoda
AMTR_s00088p00161000
N
SCL5
Arabidopsis thaliana
AT1G50600
N
SCL21
Arabidopsis thaliana
AT2G04890
N
PAT1
Arabidopsis thaliana
AT5G48150
N
BGIOSGA026022
Oryza indica
BGIOSGA026022
N
BGIOSGA032058
Oryza indica
BGIOSGA032058
N
Bo2g149670
Brassica oleracea
Bo2g149670
N
Bo6g022330
Brassica oleracea
Bo6g022330
N
Bo7g030310
Brassica oleracea
Bo7g030310
N
Bo7g089080
Brassica oleracea
Bo7g089080
N
Bo9g009260
Brassica oleracea
Bo9g009260
N
Bra018860
Brassica rapa
Bra018860
N
Bra020715
Brassica rapa
Bra020715
N
Bra036185
Brassica rapa
Bra036185
N
Bra037509
Brassica rapa
Bra037509
N
BRADI1G23350
Brachypodium distachyon
BRADI1G23350
N
F775_15940
Aegilops tauschii
F775_15940
N
F775_28371
Aegilops tauschii
F775_28371
N
SCL5
Arabidopsis lyrata
fgenesh2_kg.1__4145__AT1G50600.1
N
GLYMA02G46730
Glycine max
GLYMA02G46730
N
GLYMA02G47640
Glycine max
GLYMA02G47640
N
GLYMA14G01020
Glycine max
GLYMA14G01020
N
GLYMA14G01960
Glycine max
GLYMA14G01960
N
GRMZM2G431309
Zea mays
GRMZM2G431309
N
LPERR07G17460
Leersia perrieri
LPERR07G17460
N
LPERR10G05390
Leersia perrieri
LPERR10G05390
N
MLOC_65838
Hordeum vulgare
MLOC_65838
N
MTR_3g056110
Medicago truncatula
MTR_3g056110
N
MTR_5g094450
Medicago truncatula
MTR_5g094450
N
MTR_5g097480
Medicago truncatula
MTR_5g097480
N
OB07G25870
Oryza brachyantha
OB07G25870
N
OB10G15940
Oryza brachyantha
OB10G15940
N
OBART07G20130
Oryza barthii
OBART07G20130
N
OBART10G07700
Oryza barthii
OBART10G07700
N
OGLUM07G19910
Oryza glumaepatula
OGLUM07G19910
N
OGLUM10G07400
Oryza glumaepatula
OGLUM10G07400
N
OLONG_015869
Oryza longistaminata
OLONG_015869
N
OMERI07G16830
Oryza meridionalis
OMERI07G16830
N
OMERI10G05450
Oryza meridionalis
OMERI10G05450
N
ONIVA07G18570
Oryza nivara
ONIVA07G18570
N
ONIVA10G07150
Oryza nivara
ONIVA10G07150
N
OPUNC07G19030
Oryza punctata
OPUNC07G19030
N
OPUNC10G06730
Oryza punctata
OPUNC10G06730
N
ORGLA07G0258500
Oryza glaberrima
ORGLA07G0258500
N
ORGLA10G0063900
Oryza glaberrima
ORGLA10G0063900
N
ORUFI07G20980
Oryza rufipogon
ORUFI07G20980
N
ORUFI10G08100
Oryza rufipogon
ORUFI10G08100
N
CIGR2
Oryza sativa
OS07G0583600
N
PGSC0003DMG400006132
Solanum tuberosum
PGSC0003DMG400006132
N
PGSC0003DMG400022187
Solanum tuberosum
PGSC0003DMG400022187
N
SCL5
Populus trichocarpa
POPTR_0001s37270
N
POPTR_0014s16230
Populus trichocarpa
POPTR_0014s16230
N
PRUPE_ppa003702mg
Prunus persica
PRUPE_ppa003702mg
N
PRUPE_ppa004136mg
Prunus persica
PRUPE_ppa004136mg
N
Sb02g037650
Sorghum bicolor
Sb02g037650
N
SCL21
Arabidopsis lyrata
scaffold_303269.1
N
PAT1
Arabidopsis lyrata
scaffold_801100.1
N
Si029418m.g
Setaria italica
Si029418m.g
N
Si035052m.g
Setaria italica
Si035052m.g
N
Solyc07g047950.1
Solanum lycopersicum
Solyc07g047950.1
N
Solyc07g065270.1
Solanum lycopersicum
Solyc07g065270.1
N
TCM_002319
Theobroma cacao
TCM_002319
N
TCM_030393
Theobroma cacao
TCM_030393
N
TCM_030733
Theobroma cacao
TCM_030733
N
Traes_2BS_D007D6598
Triticum aestivum
Traes_2BS_D007D6598
N
Traes_2DS_CCA2FCCAD
Triticum aestivum
Traes_2DS_CCA2FCCAD
N
Traes_5BL_A7C4DAE11
Triticum aestivum
Traes_5BL_A7C4DAE11
N
Traes_5DL_B89CD8432
Triticum aestivum
Traes_5DL_B89CD8432
N
SCL13
Vitis vinifera
VIT_00s0463g00020
N
VIT_12s0057g00560
Vitis vinifera
VIT_12s0057g00560
N
SCL5
Vitis vinifera
VIT_19s0090g01740
N
Ca_09786
Cicer arietinum
Ca_09786
N
Ca_13855
Cicer arietinum
Ca_13855
N
Cla001429
Citrullus lanatus
Cla001429
N
Cla004565
Citrullus lanatus
Cla004565
N
Pm012019
Prunus mume
Pm012019
N
Pm015021
Prunus mume
Pm015021
N
27613.m000642
Ricinus communis
27613.m000642
N
29949.m000124
Ricinus communis
29949.m000124
N
cassava10826.m1
Manihot esculenta
cassava10826.m1
N
cassava34106.m1
Manihot esculenta
cassava34106.m1
N
cassava34699.m1
Manihot esculenta
cassava34699.m1
N
cassava8885.m1
Manihot esculenta
cassava8885.m1
N
Cucsa.042310
Cucumis sativus
Cucsa.042310
N
Cucsa.120390
Cucumis sativus
Cucsa.120390
N
mgf013039m
Mimulus guttatus
mgf013039m
N
Aquca_005_00234
Aquilegia coerulea
Aquca_005_00234
N
Aquca_028_00248
Aquilegia coerulea
Aquca_028_00248
N
Bostr.19424s0023
Boechera stricta
Bostr.19424s0023
N
Bostr.26675s0117
Boechera stricta
Bostr.26675s0117
N
Bostr.5224s0004
Boechera stricta
Bostr.5224s0004
N
Cagra.1158s0007
Capsella grandiflora
Cagra.1158s0007
N
Cagra.2766s0005
Capsella grandiflora
Cagra.2766s0005
N
Cagra.7055s0004
Capsella grandiflora
Cagra.7055s0004
N
Carubv10008830m.g
Capsella rubella
Carubv10008830m.g
N
Carubv10015685m.g
Capsella rubella
Carubv10015685m.g
N
Carubv10026289m.g
Capsella rubella
Carubv10026289m.g
N
Ciclev10007927m.g
Citrus clementina
Ciclev10007927m.g
N
Ciclev10014845m.g
Citrus clementina
Ciclev10014845m.g
N
Eucgr.A01051
Eucalyptus grandis
Eucgr.A01051
N
Eucgr.F03523
Eucalyptus grandis
Eucgr.F03523
N
evm.TU.supercontig_12.194
Carica papaya
evm.TU.supercontig_12.194
N
evm.TU.supercontig_136.17
Carica papaya
evm.TU.supercontig_136.17
N
gene03551-v1.0-hybrid
Fragaria vesca
gene03551-v1.0-hybrid
N
gene21592-v1.0-hybrid
Fragaria vesca
gene21592-v1.0-hybrid
N
Gorai.001G192800
Gossypium raimondii
Gorai.001G192800
N
Gorai.002G096300
Gossypium raimondii
Gorai.002G096300
N
Gorai.007G167000
Gossypium raimondii
Gorai.007G167000
N
Gorai.009G446100
Gossypium raimondii
Gorai.009G446100
N
Lus10006369.g
Linum usitatissimum
Lus10006369.g
N
Lus10012323.g
Linum usitatissimum
Lus10012323.g
N
Lus10016596.g
Linum usitatissimum
Lus10016596.g
N
MDP0000152670
Malus domestica
MDP0000152670
N
MDP0000205236
Malus domestica
MDP0000205236
N
MDP0000284679
Malus domestica
MDP0000284679
N
MDP0000804652
Malus domestica
MDP0000804652
N
orange1.1g009376m.g
Citrus sinensis
orange1.1g009376m.g
N
Pavir.Ba00562
Panicum virgatum
Pavir.Ba00562
N
Pavir.Ia02739
Panicum virgatum
Pavir.Ia02739
N
SapurV1A.0030s0420
Salix purpurea
SapurV1A.0030s0420
N
SapurV1A.0054s0160
Salix purpurea
SapurV1A.0054s0160
N
Thhalv10002541m.g
Eutrema salsugineum
Thhalv10002541m.g
N
Thhalv10004053m.g
Eutrema salsugineum
Thhalv10004053m.g
N
Thhalv10011379m.g
Eutrema salsugineum
Thhalv10011379m.g
N
PK09018.1
Cannabis sativa
PK09018.1
N
PK15082.1
Cannabis sativa
PK15082.1
N
PDK_20s1411471g003
Phoenix dactylifera
PDK_20s1411471g003
N