VIT_03s0038g02130 (Vitis vinifera)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 VIT_03s0038g02130 T165218_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CSP4
M01902_2.00 		Arabidopsis thaliana
AAWAAAAM
KTTTTWTT		 PBM
Weirauch et al.(2014)
pTH7494 		0.742 0.742
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_03s0038g02130.t01 CSD 4 70

Links

Other CSD family TFs
Other Vitis vinifera TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CSP4 Arabidopsis thaliana AT2G21060 D 0.742
CSP2 Arabidopsis thaliana AT4G38680 I 0.758
Bo3g141510 Brassica oleracea Bo3g141510 I 0.742
Bo4g145670 Brassica oleracea Bo4g145670 I 0.742
Bo7g049880 Brassica oleracea Bo7g049880 I 0.742
Bo8g102040 Brassica oleracea Bo8g102040 I 0.742
Bra030325 Brassica rapa Bra030325 I 0.727
Bra031159 Brassica rapa Bra031159 I 0.742
ATGRP2B Arabidopsis lyrata fgenesh2_kg.4__14__AT2G21060.1 I 0.742
OB02G23180 Oryza brachyantha OB02G23180 I 0.718
PGSC0003DMG400023206 Solanum tuberosum PGSC0003DMG400023206 I 0.818
GRP2 Arabidopsis lyrata scaffold_700059.1 I 0.758
Solyc10g055250.1 Solanum lycopersicum Solyc10g055250.1 I 0.803
Pm020837 Prunus mume Pm020837 I 0.848
mgf015980m Mimulus guttatus mgf015980m I 0.818
Bostr.25542s0051 Boechera stricta Bostr.25542s0051 I 0.758
Cagra.2961s0009 Capsella grandiflora Cagra.2961s0009 I 0.758
Gorai.002G195000 Gossypium raimondii Gorai.002G195000 I 0.803
Gorai.002G195100 Gossypium raimondii Gorai.002G195100 I 0.803
Gorai.005G253200 Gossypium raimondii Gorai.005G253200 I 0.818
PK26692.1 Cannabis sativa PK26692.1 I 0.745
AMTR_s00017p00206510 Amborella trichopoda AMTR_s00017p00206510 N 0.742
AMTR_s00041p00167350 Amborella trichopoda AMTR_s00041p00167350 N 0.712
BGIOSGA007226 Oryza indica BGIOSGA007226 N 0.758
BGIOSGA027713 Oryza indica BGIOSGA027713 N 0.742
BRADI1G02640 Brachypodium distachyon BRADI1G02640 N 0.803
BRADI1G02650 Brachypodium distachyon BRADI1G02650 N 0.818
BRADI2G07090 Brachypodium distachyon BRADI2G07090 N 0.742
BRADI3G01960 Brachypodium distachyon BRADI3G01960 N 0.788
CHLREDRAFT_126810 Chlamydomonas reinhardtii CHLREDRAFT_126810 N 0.742
EMIHUDRAFT_78118 Emiliania huxleyi EMIHUDRAFT_78118 N 0.727
GLYMA04G00660 Glycine max GLYMA04G00660 N 0.758
GLYMA04G43130 Glycine max GLYMA04G43130 N 0.727
GLYMA11G11290 Glycine max GLYMA11G11290 N 0.788
GLYMA12G03470 Glycine max GLYMA12G03470 N 0.803
GRMZM2G389768 Zea mays GRMZM2G389768 N 0.803
GRMZM5G895313 Zea mays GRMZM5G895313 N 0.727
LPERR02G01370 Leersia perrieri LPERR02G01370 N 0.758
LPERR08G02000 Leersia perrieri LPERR08G02000 N 0.742
OBART02G01600 Oryza barthii OBART02G01600 N 0.758
OGLUM02G01470 Oryza glumaepatula OGLUM02G01470 N 0.758
OGLUM08G01920 Oryza glumaepatula OGLUM08G01920 N 0.742
OMERI02G00930 Oryza meridionalis OMERI02G00930 N 0.758
OMERI08G01940 Oryza meridionalis OMERI08G01940 N 0.742
ONIVA02G01490 Oryza nivara ONIVA02G01490 N 0.773
ONIVA08G01720 Oryza nivara ONIVA08G01720 N 0.742
OPUNC02G01060 Oryza punctata OPUNC02G01060 N 0.758
ORGLA02G0014700 Oryza glaberrima ORGLA02G0014700 N 0.758
ORGLA08G0012100 Oryza glaberrima ORGLA08G0012100 N 0.742
ORUFI02G01580 Oryza rufipogon ORUFI02G01580 N 0.758
ORUFI08G02050 Oryza rufipogon ORUFI08G02050 N 0.742
OS02G0121100 Oryza sativa OS02G0121100 N 0.758
OS08G0129200 Oryza sativa OS08G0129200 N 0.742
PGSC0003DMG400001590 Solanum tuberosum PGSC0003DMG400001590 N 0.773
PGSC0003DMG400001591 Solanum tuberosum PGSC0003DMG400001591 N 0.727
PGSC0003DMG400045717 Solanum tuberosum PGSC0003DMG400045717 N 0.750
POPTR_0004s17840 Populus trichocarpa POPTR_0004s17840 N 0.818
POPTR_0005s15990 Populus trichocarpa POPTR_0005s15990 N 0.727
POPTR_0009s13460 Populus trichocarpa POPTR_0009s13460 N 0.803
PRUPE_ppa010531mg Prunus persica PRUPE_ppa010531mg N 0.712
Sb04g001720 Sorghum bicolor Sb04g001720 N 0.803
Sb06g029650 Sorghum bicolor Sb06g029650 N 0.758
SELMODRAFT_123455 Selaginella moellendorffii SELMODRAFT_123455 N 0.709
SELMODRAFT_154869 Selaginella moellendorffii SELMODRAFT_154869 N 0.712
SELMODRAFT_186937 Selaginella moellendorffii SELMODRAFT_186937 N 0.742
SELMODRAFT_187582 Selaginella moellendorffii SELMODRAFT_187582 N 0.742
Solyc01g111300.2 Solanum lycopersicum Solyc01g111300.2 N 0.773
Traes_6AS_539B381F1 Triticum aestivum Traes_6AS_539B381F1 N 0.788
VIT_04s0023g03520 Vitis vinifera VIT_04s0023g03520 N 0.773
Ca_11038 Cicer arietinum Ca_11038 N 0.773
Cla016088 Citrullus lanatus Cla016088 N 0.773
Pm026767 Prunus mume Pm026767 N 0.712
AZW_EuGene.0000110131 Micromonas pusilla AZW_EuGene.0000110131 N 0.727
cassava12557.valid.m1 Manihot esculenta cassava12557.valid.m1 N 0.864
cassava29163.valid.m1 Manihot esculenta cassava29163.valid.m1 N 0.894
Cucsa.381750 Cucumis sativus Cucsa.381750 N 0.773
estExt_Genewise1Plus.C_10818 Volvox carteri estExt_Genewise1Plus.C_10818 N 0.712
estExt_gwp_gw1.C_410063 Physcomitrella patens estExt_gwp_gw1.C_410063 N 0.788
estExt_gwp_gw1.C_640002 Physcomitrella patens estExt_gwp_gw1.C_640002 N 0.788
gw1.103.78.1 Physcomitrella patens gw1.103.78.1 N 0.773
IGS.gm_9_00317 Chlorella NC64A IGS.gm_9_00317 N 0.787
mgf001526m Mimulus guttatus mgf001526m N 0.803
mgf014458m Mimulus guttatus mgf014458m N 0.803
estExt_fgenesh1_pg.C_10541 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pg.C_10541 N 0.818
Eucgr.I01395 Eucalyptus grandis Eucgr.I01395 N 0.776
EuGene.0200010100 Micromonas sp RCC299 EuGene.0200010100 N 0.773
evm.TU.supercontig_37.170 Carica papaya evm.TU.supercontig_37.170 N 0.833
fgenesh1_pg.1_#_433 Coccomyxa subellipsoidea C169 fgenesh1_pg.1_#_433 N 0.788
gene07618-v1.0-hybrid Fragaria vesca gene07618-v1.0-hybrid N 0.818
gene11124-v1.0-hybrid Fragaria vesca gene11124-v1.0-hybrid N 0.727
Gorai.002G003500 Gossypium raimondii Gorai.002G003500 N 0.758
Gorai.008G062500 Gossypium raimondii Gorai.008G062500 N 0.712
Lus10005066.g Linum usitatissimum Lus10005066.g N 0.788
Lus10025058.g Linum usitatissimum Lus10025058.g N 0.727
Lus10027839.g Linum usitatissimum Lus10027839.g N 0.788
MDP0000121628 Malus domestica MDP0000121628 N 0.758
MDP0000155077 Malus domestica MDP0000155077 N 0.818
MDP0000198079 Malus domestica MDP0000198079 N 0.727
MDP0000202739 Malus domestica MDP0000202739 N 0.818
MDP0000225222 Malus domestica MDP0000225222 N 0.803
MDP0000632148 Malus domestica MDP0000632148 N 0.727
Pavir.Ab00211 Panicum virgatum Pavir.Ab00211 N 0.778
Pavir.J33226 Panicum virgatum Pavir.J33226 N 0.803
Pavir.J33349 Panicum virgatum Pavir.J33349 N 0.803
SapurV1A.0117s0150 Salix purpurea SapurV1A.0117s0150 N 0.833
SapurV1A.0514s0160 Salix purpurea SapurV1A.0514s0160 N 0.803
PK01533.1 Cannabis sativa PK01533.1 N 0.788
PK03316.1 Cannabis sativa PK03316.1 N 0.742
chr3.CM0112.180.nd Lotus japonicus chr3.CM0112.180.nd N 0.818
chr6.CM0045.280.nd Lotus japonicus chr6.CM0045.280.nd N 0.788
e_gw1.1.536.1 Chlorella vulgaris e_gw1.1.536.1 N 0.788
estExt_fgeneshCV_pm.C_10002 Chlorella vulgaris estExt_fgeneshCV_pm.C_10002 N 0.818