KDM2A (Sus scrofa)
CxxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02008 (zf-CXXC) IPR002857 ENSSSCG00000029637 T168326_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KDM2A
M01915_2.00 		Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN		 PBM
Weirauch et al.(2014)
pTH9212 		0.936 0.936
kdm2ba
M01909_2.00 		Danio rerio
NNNNCGN
NCGNNNN		 PBM
Weirauch et al.(2014)
pTH8577 		0.809 0.809
KDM2B
M01911_2.00 		Homo sapiens
NNNNNNCGN
NCGNNNNNN		 PBM
Weirauch et al.(2014)
pTH9191 		0.787 0.787
FBXL19
M01916_2.00 		Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN		 PBM
Weirauch et al.(2014)
pTH8570 		0.787 0.787
A6H8I1_DANRE
M01906_2.00 		Danio rerio
CGTACGYA
TRCGTACG		 PBM
Weirauch et al.(2014)
pTH9257 		0.745 0.745
kdm2aa
M01910_2.00 		Danio rerio
NCGNNNNNN
NNNNNNCGN		 PBM
Weirauch et al.(2014)
pTH8585 		0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000019878 CxxC 252 298

Links

Other CxxC family TFs
Other Sus scrofa TFs

203 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HMGB13 Arabidopsis thaliana AT4G11080 D 0.000
Solyc08g082070.2 Solanum lycopersicum Solyc08g082070.2 I 0.000
PK10992.1 Cannabis sativa PK10992.1 I 0.000
TCM_016416 Theobroma cacao TCM_016416 I 0.000
Traes_2AL_72F4E1905 Triticum aestivum Traes_2AL_72F4E1905 I 0.000
VIT_02s0025g01220 Vitis vinifera VIT_02s0025g01220 I 0.000
Cla011101 Citrullus lanatus Cla011101 I 0.000
Pm024077 Prunus mume Pm024077 I 0.000
30190.m010807 Ricinus communis 30190.m010807 I 0.000
mgf015439m Mimulus guttatus mgf015439m I 0.000
Aquca_013_00142 Aquilegia coerulea Aquca_013_00142 I 0.000
Bostr.25463s0218 Boechera stricta Bostr.25463s0218 I 0.000
Cagra.3839s0003 Capsella grandiflora Cagra.3839s0003 I 0.000
Carubv10000930m.g Capsella rubella Carubv10000930m.g I 0.000
Carubv10007590m.g Capsella rubella Carubv10007590m.g I 0.000
Ciclev10023918m.g Citrus clementina Ciclev10023918m.g I 0.000
Eucgr.E00847 Eucalyptus grandis Eucgr.E00847 I 0.000
Gorai.007G025500 Gossypium raimondii Gorai.007G025500 I 0.000
Lus10001909.g Linum usitatissimum Lus10001909.g I 0.000
Lus10003904.g Linum usitatissimum Lus10003904.g I 0.000
Lus10032379.g Linum usitatissimum Lus10032379.g I 0.000
Pavir.Ab01026 Panicum virgatum Pavir.Ab01026 I 0.000
Pavir.J07596 Panicum virgatum Pavir.J07596 I 0.000
OGLUM02G11100 Oryza glumaepatula OGLUM02G11100 I 0.000
fgenesh2_kg.6__3081__AT4G11080.1 Arabidopsis lyrata fgenesh2_kg.6__3081__AT4G11080.1 I 0.000
GLYMA05G37010 Glycine max GLYMA05G37010 I 0.000
GRMZM2G060253 Zea mays GRMZM2G060253 I 0.000
GSMUA_Achr6G14260_001 Musa acuminata GSMUA_Achr6G14260_001 I 0.000
BRADI3G09690 Brachypodium distachyon BRADI3G09690 I 0.000
Bra035256 Brassica rapa Bra035256 I 0.000
OBART02G11160 Oryza barthii OBART02G11160 I 0.000
BGIOSGA006746 Oryza indica BGIOSGA006746 I 0.000
Sb04g009610 Sorghum bicolor Sb04g009610 I 0.000
ONIVA02G12490 Oryza nivara ONIVA02G12490 I 0.000
OPUNC02G09900 Oryza punctata OPUNC02G09900 I 0.000
ORUFI02G11130 Oryza rufipogon ORUFI02G11130 I 0.000
PGSC0003DMG400012298 Solanum tuberosum PGSC0003DMG400012298 I 0.000
PRUPE_ppa004611mg Prunus persica PRUPE_ppa004611mg I 0.000
AMTR_s00093p00057150 Amborella trichopoda AMTR_s00093p00057150 N 0.000
F775_10696 Aegilops tauschii F775_10696 N 0.000
LPERR02G09420 Leersia perrieri LPERR02G09420 N 0.000
MLOC_57360 Hordeum vulgare MLOC_57360 N 0.000
OB02G19930 Oryza brachyantha OB02G19930 N 0.000
OLONG_021730 Oryza longistaminata OLONG_021730 N 0.000
OMERI02G11890 Oryza meridionalis OMERI02G11890 N 0.000