Pm015021 (Prunus mume)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pm015021 T201970_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm015021 GRAS 168 538

Links

Other GRAS family TFs
Other Prunus mume TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.743
SCL5 Arabidopsis thaliana AT1G50600 N 0.740
SCL21 Arabidopsis thaliana AT2G04890 N 0.721
PAT1 Arabidopsis thaliana AT5G48150 N 0.835
BGIOSGA026022 Oryza indica BGIOSGA026022 N 0.715
BGIOSGA032058 Oryza indica BGIOSGA032058 N 0.718
Bo2g149670 Brassica oleracea Bo2g149670 N 0.810
Bo6g022330 Brassica oleracea Bo6g022330 N 0.734
Bo7g030310 Brassica oleracea Bo7g030310 N 0.707
Bo7g089080 Brassica oleracea Bo7g089080 N 0.797
Bo9g009260 Brassica oleracea Bo9g009260 N 0.816
Bra018860 Brassica rapa Bra018860 N 0.734
Bra020715 Brassica rapa Bra020715 N 0.813
Bra036185 Brassica rapa Bra036185 N 0.808
Bra037509 Brassica rapa Bra037509 N 0.772
BRADI1G23350 Brachypodium distachyon BRADI1G23350 N 0.718
F775_15940 Aegilops tauschii F775_15940 N 0.710
F775_28371 Aegilops tauschii F775_28371 N 0.705
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.740
GLYMA02G46730 Glycine max GLYMA02G46730 N 0.715
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.883
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.883
GLYMA14G01960 Glycine max GLYMA14G01960 N 0.713
GRMZM2G098517 Zea mays GRMZM2G098517 N 0.702
GRMZM2G431309 Zea mays GRMZM2G431309 N 0.707
LPERR07G17460 Leersia perrieri LPERR07G17460 N 0.707
LPERR10G05390 Leersia perrieri LPERR10G05390 N 0.705
MLOC_65838 Hordeum vulgare MLOC_65838 N 0.713
MTR_3g056110 Medicago truncatula MTR_3g056110 N 0.707
MTR_5g094450 Medicago truncatula MTR_5g094450 N 0.705
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.875
OB07G25870 Oryza brachyantha OB07G25870 N 0.713
OB10G15940 Oryza brachyantha OB10G15940 N 0.707
OBART07G20130 Oryza barthii OBART07G20130 N 0.713
OBART10G07700 Oryza barthii OBART10G07700 N 0.721
OGLUM07G19910 Oryza glumaepatula OGLUM07G19910 N 0.715
OGLUM10G07400 Oryza glumaepatula OGLUM10G07400 N 0.721
OLONG_015869 Oryza longistaminata OLONG_015869 N 0.718
OMERI07G16830 Oryza meridionalis OMERI07G16830 N 0.718
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.724
ONIVA07G18570 Oryza nivara ONIVA07G18570 N 0.715
ONIVA10G07150 Oryza nivara ONIVA10G07150 N 0.715
OPUNC07G19030 Oryza punctata OPUNC07G19030 N 0.718
OPUNC10G06730 Oryza punctata OPUNC10G06730 N 0.715
ORGLA07G0258500 Oryza glaberrima ORGLA07G0258500 N 0.715
ORGLA10G0063900 Oryza glaberrima ORGLA10G0063900 N 0.721
ORUFI07G20980 Oryza rufipogon ORUFI07G20980 N 0.715
ORUFI10G08100 Oryza rufipogon ORUFI10G08100 N 0.721
CIGR2 Oryza sativa OS07G0583600 N 0.715
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.843
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.767
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.783
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.900
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.995
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.770
Sb02g037650 Sorghum bicolor Sb02g037650 N 0.705
SCL21 Arabidopsis lyrata scaffold_303269.1 N 0.728
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.821
Si029418m.g Setaria italica Si029418m.g N 0.707
Si035052m.g Setaria italica Si035052m.g N 0.705
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.843
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.772
TCM_002319 Theobroma cacao TCM_002319 N 0.897
TCM_030733 Theobroma cacao TCM_030733 N 0.799
Traes_2BS_D007D6598 Triticum aestivum Traes_2BS_D007D6598 N 0.721
Traes_2DS_CCA2FCCAD Triticum aestivum Traes_2DS_CCA2FCCAD N 0.707
Traes_5BL_A7C4DAE11 Triticum aestivum Traes_5BL_A7C4DAE11 N 0.705
Traes_5DL_B89CD8432 Triticum aestivum Traes_5DL_B89CD8432 N 0.710
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.726
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.902
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.816
Ca_09786 Cicer arietinum Ca_09786 N 0.873
Ca_13855 Cicer arietinum Ca_13855 N 0.729
Cla001429 Citrullus lanatus Cla001429 N 0.854
Cla004565 Citrullus lanatus Cla004565 N 0.729
Pm012019 Prunus mume Pm012019 N 0.797
27613.m000642 Ricinus communis 27613.m000642 N 0.821
29949.m000124 Ricinus communis 29949.m000124 N 0.875
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.818
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.797
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.808
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.786
Cucsa.042310 Cucumis sativus Cucsa.042310 N 0.710
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.848
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.827
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.783
Bostr.19424s0023 Boechera stricta Bostr.19424s0023 N 0.734
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.734
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.821
Cagra.1158s0007 Capsella grandiflora Cagra.1158s0007 N 0.712
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.827
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.732
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.732
Carubv10015685m.g Capsella rubella Carubv10015685m.g N 0.707
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.827
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.770
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.851
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.854
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.743
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.759
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.889
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.786
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.954
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.900
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.772
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.892
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.775
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.789
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.827
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.775
MDP0000152670 Malus domestica MDP0000152670 N 0.951
MDP0000205236 Malus domestica MDP0000205236 N 0.772
MDP0000284679 Malus domestica MDP0000284679 N 0.772
MDP0000804652 Malus domestica MDP0000804652 N 0.957
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.851
Pavir.Ba00562 Panicum virgatum Pavir.Ba00562 N 0.713
Pavir.Ia02739 Panicum virgatum Pavir.Ia02739 N 0.707
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.791
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.900
Thhalv10002541m.g Eutrema salsugineum Thhalv10002541m.g N 0.721
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.797
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.724
PK09018.1 Cannabis sativa PK09018.1 N 0.854
PK15082.1 Cannabis sativa PK15082.1 N 0.745
chr6.LjT11E14.20.nc Lotus japonicus chr6.LjT11E14.20.nc N 0.702
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.748
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.753