cassava15077.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava15077.m1 T202048_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava15077.m1 GRAS 265 624

Links

Other GRAS family TFs
Other Manihot esculenta TFs

94 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.770
Pm014329 Prunus mume Pm014329 I 0.821
Ca_13295 Cicer arietinum Ca_13295 I 0.756
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.806
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.797
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.807
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.792
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.798
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.787
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.908
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.778
MDP0000669451 Malus domestica MDP0000669451 I 0.813
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.776
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.770
RGL2 Arabidopsis lyrata fgenesh2_kg.3__292__AT3G03450.1 I 0.700
Cucsa.006260 Cucumis sativus Cucsa.006260 N 0.770
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N 0.866
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.874
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.832
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.826
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.759
Aquca_002_01300 Aquilegia coerulea Aquca_002_01300 N 0.725
mgf025772m Mimulus guttatus mgf025772m N 0.753
mgf008289m Mimulus guttatus mgf008289m N 0.828
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.871
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.910
Thhalv10018436m.g Eutrema salsugineum Thhalv10018436m.g N 0.709
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.952
PK14700.1 Cannabis sativa PK14700.1 N 0.896
29692.m000540 Ricinus communis 29692.m000540 N 0.958
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.774
28677.m000055 Ricinus communis 28677.m000055 N 0.790
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.774
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.776
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N 0.818
Pavir.Ia00840 Panicum virgatum Pavir.Ia00840 N 0.731
MDP0000237978 Malus domestica MDP0000237978 N 0.849
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.760
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.765
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.902
Pavir.Ib04357 Panicum virgatum Pavir.Ib04357 N 0.731
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.912
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N 0.866
Ca_05046 Cicer arietinum Ca_05046 N 0.826
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.849
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N 0.813
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.811
Carubv10018534m.g Capsella rubella Carubv10018534m.g N 0.847
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.832
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.832
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.811
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.855
OGLUM03G31610 Oryza glumaepatula OGLUM03G31610 N 0.713
OBART03G31370 Oryza barthii OBART03G31370 N 0.713
OB03G38380 Oryza brachyantha OB03G38380 N 0.713
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.780
MLOC_67940 Hordeum vulgare MLOC_67940 N 0.717
LPERR03G26000 Leersia perrieri LPERR03G26000 N 0.720
GRMZM2G144744 Zea mays GRMZM2G144744 N 0.733
GRMZM2G024973 Zea mays GRMZM2G024973 N 0.711
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.820
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.824
OMERI03G27970 Oryza meridionalis OMERI03G27970 N 0.713
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.826
F775_03572 Aegilops tauschii F775_03572 N 0.759
BRADI1G11090 Brachypodium distachyon BRADI1G11090 N 0.714
Bra024875 Brassica rapa Bra024875 N 0.858
Bra017443 Brassica rapa Bra017443 N 0.745
Bo9g070200 Brassica oleracea Bo9g070200 N 0.761
Bo7g078550 Brassica oleracea Bo7g078550 N 0.860
SLR1 Oryza indica BGIOSGA013420 N 0.713
RGA Arabidopsis thaliana AT2G01570 N 0.855
GAI Arabidopsis thaliana AT1G14920 N 0.826
Sb01g010660 Sorghum bicolor Sb01g010660 N 0.725
Cla020062 Citrullus lanatus Cla020062 N 0.779
Cla003996 Citrullus lanatus Cla003996 N 0.874
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.785
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.877
Traes_4DS_ADBA6E30A Triticum aestivum Traes_4DS_ADBA6E30A N 0.709
Traes_4BS_2EE4988CD Triticum aestivum Traes_4BS_2EE4988CD N 0.711
TCM_019165 Theobroma cacao TCM_019165 N 0.792
TCM_010965 Theobroma cacao TCM_010965 N 0.910
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.798
Si039400m.g Setaria italica Si039400m.g N 0.719
Pm006304 Prunus mume Pm006304 N 0.874
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.871
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.916
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.922
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.801
SLR1 Oryza sativa OS03G0707600 N 0.723
ORUFI03G32650 Oryza rufipogon ORUFI03G32650 N 0.710
ORGLA03G0290200 Oryza glaberrima ORGLA03G0290200 N 0.713
OPUNC03G28530 Oryza punctata OPUNC03G28530 N 0.713
ONIVA03G32670 Oryza nivara ONIVA03G32670 N 0.713