MDP0000205236 (Malus domestica)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 MDP0000205236 T202822_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000205236 GRAS 167 537

Links

Other GRAS family TFs
Other Malus domestica TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.721
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.840
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.786
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.767
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.767
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.759
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.753
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.764
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.729
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.718
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.718
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.729
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.780
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.726
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.737
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.759
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.751
Cucsa.042310 Cucumis sativus Cucsa.042310 N 0.715
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.816
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.768
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.810
29949.m000124 Ricinus communis 29949.m000124 N 0.758
27613.m000642 Ricinus communis 27613.m000642 N 0.818
MDP0000804652 Malus domestica MDP0000804652 N 0.772
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.726
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.755
chr6.LjT11E14.20.nc Lotus japonicus chr6.LjT11E14.20.nc N 0.721
PK15082.1 Cannabis sativa PK15082.1 N 0.753
PK09018.1 Cannabis sativa PK09018.1 N 0.753
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.721
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.700
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.775
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.770
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.759
Pm015021 Prunus mume Pm015021 N 0.772
MDP0000284679 Malus domestica MDP0000284679 N 1.000
MDP0000152670 Malus domestica MDP0000152670 N 0.775
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.764
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.738
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.744
Lus10003772.g Linum usitatissimum Lus10003772.g N 0.779
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.783
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.783
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.794
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.778
Bra036185 Brassica rapa Bra036185 N 0.713
MTR_5g094450 Medicago truncatula MTR_5g094450 N 0.721
MTR_3g056110 Medicago truncatula MTR_3g056110 N 0.707
GLYMA18G09030 Glycine max GLYMA18G09030 N 0.721
GLYMA14G01960 Glycine max GLYMA14G01960 N 0.724
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.778
GLYMA09G22110 Glycine max GLYMA09G22110 N 0.712
GLYMA08G43780 Glycine max GLYMA08G43780 N 0.715
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.770
GLYMA02G46730 Glycine max GLYMA02G46730 N 0.721
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.724
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.767
Bra026077 Brassica rapa Bra026077 N 0.726
Bra020715 Brassica rapa Bra020715 N 0.713
Bra018860 Brassica rapa Bra018860 N 0.721
Bo9g009260 Brassica oleracea Bo9g009260 N 0.718
Bo9g009240 Brassica oleracea Bo9g009240 N 0.710
Bo7g089080 Brassica oleracea Bo7g089080 N 0.715
Bo6g022330 Brassica oleracea Bo6g022330 N 0.721
Bo2g149670 Brassica oleracea Bo2g149670 N 0.713
PAT1 Arabidopsis thaliana AT5G48150 N 0.726
SCL5 Arabidopsis thaliana AT1G50600 N 0.724
TCM_002319 Theobroma cacao TCM_002319 N 0.778
Pm012019 Prunus mume Pm012019 N 0.905
Cla004565 Citrullus lanatus Cla004565 N 0.724
Cla001429 Citrullus lanatus Cla001429 N 0.759
Ca_13855 Cicer arietinum Ca_13855 N 0.726
Ca_09786 Cicer arietinum Ca_09786 N 0.770
Ca_09696 Cicer arietinum Ca_09696 N 0.702
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.808
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.783
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.702
TCM_030733 Theobroma cacao TCM_030733 N 0.812
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.721
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.726
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.767
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.713
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.873
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.775
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.775
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.772
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.718
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.767
CIGR2 Oryza sativa OS07G0583600 N 0.707