BGIOSGA026461 (Oryza indica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BGIOSGA026461 T000662_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q1ESI9_MAIZE
M09714_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB2A_02 		0.701 0.816
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.686 0.816
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.682 0.816
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.682 0.816
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.682 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA026461-PA AP2 53 104

Links

Other AP2 family TFs
Other Oryza indica TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.724
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.730
BGIOSGA026464 Oryza indica BGIOSGA026464 I 0.816
Bo2g083920 Brassica oleracea Bo2g083920 I 0.683
Bo6g086320 Brassica oleracea Bo6g086320 I 0.678
Bo6g119660 Brassica oleracea Bo6g119660 I 0.682
Bo9g155940 Brassica oleracea Bo9g155940 I 0.686
Bostr.23794s0027 Boechera stricta Bostr.23794s0027 I 0.702
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.686
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.682
Bra002159 Brassica rapa Bra002159 I 0.686
Bra003752 Brassica rapa Bra003752 I 0.678
Bra008200 Brassica rapa Bra008200 I 0.683
Bra015840 Brassica rapa Bra015840 I 0.682
BRADI3G12680 Brachypodium distachyon BRADI3G12680 I 0.790
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.690
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.682
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.690
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.682
chr1.CM0195.510.nd Lotus japonicus chr1.CM0195.510.nd I 0.715
Ciclev10022244m.g Citrus clementina Ciclev10022244m.g I 0.736
Cla001755 Citrullus lanatus Cla001755 I 0.684
Cla022803 Citrullus lanatus Cla022803 I 0.719
Cucsa.119440 Cucumis sativus Cucsa.119440 I 0.684
Cucsa.231820 Cucumis sativus Cucsa.231820 I 0.719
DREB2C Oryza sativa OS08G0565200 I 0.816
DREB2D Arabidopsis thaliana AT1G75490 D 0.682
DREB2G Arabidopsis thaliana AT5G18450 D 0.686
Eucgr.F01607 Eucalyptus grandis Eucgr.F01607 I 0.713
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.695
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.691
F775_01779 Aegilops tauschii F775_01779 I 0.769
F775_02345 Aegilops tauschii F775_02345 I 0.783
F775_32062 Aegilops tauschii F775_32062 I 0.698
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.682
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.677
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.700
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.707
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.695
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.687
GRMZM2G006745 Zea mays GRMZM2G006745 I 0.701
GRMZM2G028386 Zea mays GRMZM2G028386 I 0.721
GRMZM2G156737 Zea mays GRMZM2G156737 I 0.731
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I 0.696
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.711
LPERR08G12790 Leersia perrieri LPERR08G12790 I 0.775
LPERR08G20650 Leersia perrieri LPERR08G20650 I 0.801
Lus10003581.g Linum usitatissimum Lus10003581.g I 0.686
Lus10006127.g Linum usitatissimum Lus10006127.g I 0.718
Lus10010632.g Linum usitatissimum Lus10010632.g I 0.718
Lus10024298.g Linum usitatissimum Lus10024298.g I 0.718
MDP0000147009 Malus domestica MDP0000147009 I 0.714
MDP0000165880 Malus domestica MDP0000165880 I 0.716
MDP0000250924 Malus domestica MDP0000250924 I 0.678
MDP0000446783 Malus domestica MDP0000446783 I 0.714
mgf017629m Mimulus guttatus mgf017629m I 0.697
MLOC_12223 Hordeum vulgare MLOC_12223 I 0.781
MLOC_66580 Hordeum vulgare MLOC_66580 I 0.783
MTR_3g112440 Medicago truncatula MTR_3g112440 I 0.681
OB08G30790 Oryza brachyantha OB08G30790 I 0.816
OGLUM08G25470 Oryza glumaepatula OGLUM08G25470 I 0.816
OMERI08G18820 Oryza meridionalis OMERI08G18820 I 0.816
ONIVA09G01190 Oryza nivara ONIVA09G01190 I 0.816
OPUNC08G21890 Oryza punctata OPUNC08G21890 I 0.816
ORGLA08G0193700 Oryza glaberrima ORGLA08G0193700 I 0.816
ORUFI08G26490 Oryza rufipogon ORUFI08G26490 I 0.816
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I 0.696
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I 0.696
Pavir.J22169 Panicum virgatum Pavir.J22169 I 0.783
Pavir.J25464 Panicum virgatum Pavir.J25464 I 0.783
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.685
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.713
Pm003634 Prunus mume Pm003634 I 0.696
Pm018989 Prunus mume Pm018989 I 0.714
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.714
PRUPE_ppa022996mg Prunus persica PRUPE_ppa022996mg I 0.698
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.700
Q1ESI9_MAIZE Zea mays Q1ESI9_MAIZE D 0.701
Sb07g023575 Sorghum bicolor Sb07g023575 I 0.718
Sb09g016150 Sorghum bicolor Sb09g016150 I 0.701
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.686
SELMODRAFT_38498 Selaginella moellendorffii SELMODRAFT_38498 N 0.688
SELMODRAFT_38500 Selaginella moellendorffii SELMODRAFT_38500 N 0.688
Si022619m.g Setaria italica Si022619m.g I 0.696
Si024059m.g Setaria italica Si024059m.g I 0.783
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.713
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.685
TCM_026121 Theobroma cacao TCM_026121 I 0.725
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.686
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.682
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.698
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.698
Traes_2AL_3FB37A3E7 Triticum aestivum Traes_2AL_3FB37A3E7 I 0.763
Traes_2BL_B397F2CE3 Triticum aestivum Traes_2BL_B397F2CE3 I 0.790
Traes_2DL_B32203C91 Triticum aestivum Traes_2DL_B32203C91 I 0.783
TRIUR3_03342 Triticum urartu TRIUR3_03342 N 0.756
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.698
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.677