Ciclev10000693m.g (Citrus clementina)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Ciclev10000693m.g T022926_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.701 0.701
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10000693m B3 122 224
Ciclev10000695m B3 122 224
Ciclev10000696m B3 122 224

Links

Other B3 family TFs
Other Citrus clementina TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I
BGIOSGA026461 Oryza indica BGIOSGA026461 I
BGIOSGA026464 Oryza indica BGIOSGA026464 I
Bo2g083920 Brassica oleracea Bo2g083920 I
Bo6g086320 Brassica oleracea Bo6g086320 I
Bo6g119660 Brassica oleracea Bo6g119660 I
Bo9g155940 Brassica oleracea Bo9g155940 I
Bostr.23794s0027 Boechera stricta Bostr.23794s0027 I
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I
Bra002159 Brassica rapa Bra002159 I
Bra003752 Brassica rapa Bra003752 I
Bra008200 Brassica rapa Bra008200 I
Bra015840 Brassica rapa Bra015840 I
BRADI3G12680 Brachypodium distachyon BRADI3G12680 I
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I
Carubv10002425m.g Capsella rubella Carubv10002425m.g I
Carubv10020960m.g Capsella rubella Carubv10020960m.g I
chr1.CM0195.510.nd Lotus japonicus chr1.CM0195.510.nd I
Ciclev10022244m.g Citrus clementina Ciclev10022244m.g I
Cla001755 Citrullus lanatus Cla001755 I
Cla022803 Citrullus lanatus Cla022803 I
Cucsa.119440 Cucumis sativus Cucsa.119440 I
Cucsa.231820 Cucumis sativus Cucsa.231820 I
DREB2D Arabidopsis thaliana AT1G75490 D
DREB2G Arabidopsis thaliana AT5G18450 D
Eucgr.F01607 Eucalyptus grandis Eucgr.F01607 I
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I
F775_01779 Aegilops tauschii F775_01779 I
F775_02345 Aegilops tauschii F775_02345 I
F775_32062 Aegilops tauschii F775_32062 I
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I
GRMZM2G006745 Zea mays GRMZM2G006745 I
GRMZM2G028386 Zea mays GRMZM2G028386 I
GRMZM2G156737 Zea mays GRMZM2G156737 I
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I
LPERR08G12790 Leersia perrieri LPERR08G12790 I
LPERR08G20650 Leersia perrieri LPERR08G20650 I
Lus10003581.g Linum usitatissimum Lus10003581.g I
Lus10006127.g Linum usitatissimum Lus10006127.g I
Lus10010632.g Linum usitatissimum Lus10010632.g I
Lus10024298.g Linum usitatissimum Lus10024298.g I
MDP0000147009 Malus domestica MDP0000147009 I
MDP0000165880 Malus domestica MDP0000165880 I
MDP0000250924 Malus domestica MDP0000250924 I
MDP0000446783 Malus domestica MDP0000446783 I
mgf017629m Mimulus guttatus mgf017629m I
MLOC_12223 Hordeum vulgare MLOC_12223 I
MLOC_66580 Hordeum vulgare MLOC_66580 I
MTR_3g112440 Medicago truncatula MTR_3g112440 I
OB08G30790 Oryza brachyantha OB08G30790 I
OGLUM08G25470 Oryza glumaepatula OGLUM08G25470 I
OMERI08G18820 Oryza meridionalis OMERI08G18820 I
ONIVA09G01190 Oryza nivara ONIVA09G01190 I
OPUNC08G21890 Oryza punctata OPUNC08G21890 I
ORGLA08G0193700 Oryza glaberrima ORGLA08G0193700 I
ORUFI08G26490 Oryza rufipogon ORUFI08G26490 I
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I
Pavir.J22169 Panicum virgatum Pavir.J22169 I
Pavir.J25464 Panicum virgatum Pavir.J25464 I
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I
Pm003634 Prunus mume Pm003634 I
Pm018989 Prunus mume Pm018989 I
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I
PRUPE_ppa022996mg Prunus persica PRUPE_ppa022996mg I
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I
Q1ESI9_MAIZE Zea mays Q1ESI9_MAIZE D
Sb07g023575 Sorghum bicolor Sb07g023575 I
Sb09g016150 Sorghum bicolor Sb09g016150 I
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I
SELMODRAFT_38498 Selaginella moellendorffii SELMODRAFT_38498 N
SELMODRAFT_38500 Selaginella moellendorffii SELMODRAFT_38500 N
Si022619m.g Setaria italica Si022619m.g I
Si024059m.g Setaria italica Si024059m.g I
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I
TCM_026121 Theobroma cacao TCM_026121 I
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I
Traes_2AL_3FB37A3E7 Triticum aestivum Traes_2AL_3FB37A3E7 I
Traes_2BL_B397F2CE3 Triticum aestivum Traes_2BL_B397F2CE3 I
Traes_2DL_B32203C91 Triticum aestivum Traes_2DL_B32203C91 I
TRIUR3_03342 Triticum urartu TRIUR3_03342 N
TRIUR3_17409 Triticum urartu TRIUR3_17409 I
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I