CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TSTA_121740
(
Talaromyces stipitatus
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
TSTA_121740
T188732_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06173
M01992_2.00
Neurospora crassa
RTAAACAH
DTGTTTAY
PBM
Weirauch et al.(2014)
pTH8896
0.759
0.767
Foxj2
M01980_2.00
Mus musculus
RTAAACAN
NTGTTTAY
PBM
Weirauch et al.(2014)
pTH6638
0.698
0.558
Foxj2
M00790_2.00
Mus musculus
VHMAAYANN
NNTRTTKDB
PBM
Weirauch et al.(2013)
pTH3043
0.693
0.558
FOXJ2
M03016_2.00
Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
FOXJ2_1
0.693
0.558
FOXJ2
M03017_2.00
Homo sapiens
RTAAACAH
DTGTTTAY
SELEX
Jolma et al.(2013)
FOXJ2_2
0.693
0.558
FOXJ2
M03018_2.00
Homo sapiens
GTAAACAWMAACA
TGTTKWTGTTTAC
SELEX
Jolma et al.(2013)
FOXJ2_3
0.693
0.558
FOXJ2
M04809_2.00
Homo sapiens
NTRTTTACAAYANN
NNTRTTGTAAAYAN
SELEX
Yin et al.(2017)
FOXJ2_eDBD_HT-SELEX
0.693
0.558
FOXJ2
M09084_2.00
Homo sapiens
WARAYAAAYA
TRTTTRTYTW
Misc
Kulakovskiy et al.(2013)
FOXJ2_HUMAN.H11MO.0.C
0.693
0.558
Foxj2
M09100_2.00
Mus musculus
WARAYAAAYA
TRTTTRTYTW
Misc
Kulakovskiy et al.(2013)
FOXJ2_MOUSE.H11MO.0.C
0.693
0.558
FOXJ2
M10527_2.00
Homo sapiens
HHNHMRAYAAAYANHNND
HNNDNTRTTTRTYKDNDD
Transfac
Matys et al.(2006)
V$FOXJ2_01
0.693
0.558
FOXJ2
M10528_2.00
Homo sapiens
VYMAYAATATTTKN
NMAAATATTRTKRB
Transfac
Matys et al.(2006)
V$FOXJ2_02
0.693
0.558
FOXJ2
M04810_2.00
Homo sapiens
NTRTTTACAAYANN
NNTRTTGTAAAYAN
SELEX
Yin et al.(2017)
FOXJ2_eDBD_Methyl-HT-SELEX
0.693
0.558
FOXJ3
M03046_2.00
Homo sapiens
RTAAAVAA
TTBTTTAY
SELEX
Jolma et al.(2013)
FOXJ3_1
0.687
0.605
FOXJ3
M03047_2.00
Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
FOXJ3_2
0.687
0.605
FOXJ3
M03048_2.00
Homo sapiens
GTAAACATAAACA
TGTTTATGTTTAC
SELEX
Jolma et al.(2013)
FOXJ3_3
0.687
0.605
FOXJ3
M02736_2.00
Homo sapiens
AAACAATAAACA
TGTTTATTGTTT
SELEX
Jolma et al.(2010)
FOXJ3_dimer
0.687
0.605
FOXJ3
M02737_2.00
Homo sapiens
RTAAACAW
WTGTTTAY
SELEX
Jolma et al.(2010)
FOXJ3_monomer
0.687
0.605
FOXJ3
M04859_2.00
Homo sapiens
DYGTMAACAH
DTGTTKACRH
SELEX
Yin et al.(2017)
FOXJ3_eDBD_HT-SELEX
0.687
0.605
FOXJ3
M09098_2.00
Homo sapiens
WAAMMATAAACAN
NTGTTTATKKTTW
Misc
Kulakovskiy et al.(2013)
FOXJ3_HUMAN.H11MO.0.A
0.687
0.605
FOXJ3
M04860_2.00
Homo sapiens
RYGTMAACAH
DTGTTKACRY
SELEX
Yin et al.(2017)
FOXJ3_eDBD_Methyl-HT-SELEX
0.687
0.605
Foxj3
M00160_2.00
Mus musculus
NRTAAACAHN
NDTGTTTAYN
PBM
Badis et al.(2009)
Foxj3_0982
0.686
0.605
Foxj3
M01981_2.00
Mus musculus
VNHHAYANN
NNTRTDDNB
PBM
Weirauch et al.(2014)
pTH6591
0.686
0.605
Foxj3
M03055_2.00
Mus musculus
ACGGACACAAT
ATTGTGTCCGT
SELEX
Jolma et al.(2013)
Foxj3_1
0.686
0.605
Foxj3
M03056_2.00
Mus musculus
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
Foxj3_2
0.686
0.605
Foxj3
M03057_2.00
Mus musculus
RTAAACAW
WTGTTTAY
SELEX
Jolma et al.(2013)
Foxj3_3
0.686
0.605
Foxj3
M03058_2.00
Mus musculus
RTAAACAWAAACA
TGTTTWTGTTTAY
SELEX
Jolma et al.(2013)
Foxj3_4
0.686
0.605
Foxj3
M09102_2.00
Mus musculus
WAAMMATAAACAN
NTGTTTATKKTTW
Misc
Kulakovskiy et al.(2013)
FOXJ3_MOUSE.H11MO.0.A
0.686
0.605
SPU_007644
M01987_2.00
Strongylocentrotus purpuratus
NNHHAYDNN
NNHRTDDNN
PBM
Weirauch et al.(2014)
pTH6497
0.681
0.570
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EED18435
Forkhead
110
199
KPPYSYAVLIGMAILRAPSRKLTLSQIYKWISDTFAFYRAGDSGWQNSIRHNLSLNKAFLKQERPKDDPGKGNYWSIVPGMEAQFIKDKS
Links
Other
Forkhead
family TFs
Other
Talaromyces stipitatus
TFs
333 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29813.m001508
Ricinus communis
29813.m001508
I
0.000
30138.m004061
Ricinus communis
30138.m004061
I
0.000
AGL30
Arabidopsis lyrata
Al_scaffold_0005_228
I
0.000
AGL30
Arabidopsis thaliana
AT2G03060
I
0.000
AGL33
Populus trichocarpa
POPTR_0018s08400
N
0.000
AGL65
Arabidopsis thaliana
AT1G18750
D
0.000
AGL65
Arabidopsis lyrata
fgenesh2_kg.1__2055__AT1G18750.1
I
0.000
AGL65
Vitis vinifera
VIT_17s0000g06340
I
0.000
AMTR_s00010p00264750
Amborella trichopoda
AMTR_s00010p00264750
I
0.000
Aquca_002_00641
Aquilegia coerulea
Aquca_002_00641
I
0.000
Bo6g109050
Brassica oleracea
Bo6g109050
I
0.000
Bo7g080890
Brassica oleracea
Bo7g080890
I
0.000
Bo8g068060
Brassica oleracea
Bo8g068060
I
0.000
Bo8g104060
Brassica oleracea
Bo8g104060
I
0.000
Bo9g072860
Brassica oleracea
Bo9g072860
N
0.000
Bostr.0556s0119
Boechera stricta
Bostr.0556s0119
I
0.000
Bostr.7128s0485
Boechera stricta
Bostr.7128s0485
I
0.000
Bra004393
Brassica rapa
Bra004393
I
0.000
Bra016544
Brassica rapa
Bra016544
I
0.000
Bra024792
Brassica rapa
Bra024792
I
0.000
Bra031049
Brassica rapa
Bra031049
I
0.000
BRADI4G11097
Brachypodium distachyon
BRADI4G11097
I
0.000
Cagra.0534s0009
Capsella grandiflora
Cagra.0534s0009
I
0.000
Cagra.0887s0001
Capsella grandiflora
Cagra.0887s0001
I
0.000
Cagra.4153s0004
Capsella grandiflora
Cagra.4153s0004
I
0.000
Carubv10009419m.g
Capsella rubella
Carubv10009419m.g
I
0.000
Carubv10017440m.g
Capsella rubella
Carubv10017440m.g
I
0.000
Carubv10020210m.g
Capsella rubella
Carubv10020210m.g
I
0.000
cassava12018.valid.m1
Manihot esculenta
cassava12018.valid.m1
I
0.000
cassava17346.m1
Manihot esculenta
cassava17346.m1
I
0.000
cassava19791.m1
Manihot esculenta
cassava19791.m1
I
0.000
cassava46162.m1
Manihot esculenta
cassava46162.m1
I
0.000
Ca_16376
Cicer arietinum
Ca_16376
I
0.000
Ca_18082
Cicer arietinum
Ca_18082
I
0.000
chr4.CM0087.920.nd
Lotus japonicus
chr4.CM0087.920.nd
I
0.000
Ciclev10010259m.g
Citrus clementina
Ciclev10010259m.g
N
0.000
Ciclev10020575m.g
Citrus clementina
Ciclev10020575m.g
I
0.000
Ciclev10031963m.g
Citrus clementina
Ciclev10031963m.g
I
0.000
Cla010361
Citrullus lanatus
Cla010361
I
0.000
Cla018884
Citrullus lanatus
Cla018884
I
0.000
Cucsa.112840
Cucumis sativus
Cucsa.112840
I
0.000
Cucsa.284960
Cucumis sativus
Cucsa.284960
I
0.000
Eucgr.B00522
Eucalyptus grandis
Eucgr.B00522
I
0.000
evm.TU.supercontig_1.45
Carica papaya
evm.TU.supercontig_1.45
N
0.000
F775_13266
Aegilops tauschii
F775_13266
I
0.000
gene26028-v1.0-hybrid
Fragaria vesca
gene26028-v1.0-hybrid
I
0.000
GLYMA07G35610
Glycine max
GLYMA07G35610
N
0.000
GLYMA17G10941
Glycine max
GLYMA17G10941
I
0.000
Gorai.001G074200
Gossypium raimondii
Gorai.001G074200
I
0.000
Gorai.008G194100
Gossypium raimondii
Gorai.008G194100
I
0.000
GRMZM2G441115
Zea mays
GRMZM2G441115
I
0.000
GSMUA_Achr11G14240_001
Musa acuminata
GSMUA_Achr11G14240_001
N
0.000
GSMUA_Achr2G01740_001
Musa acuminata
GSMUA_Achr2G01740_001
I
0.000
GSMUA_Achr3G24170_001
Musa acuminata
GSMUA_Achr3G24170_001
I
0.000
LjSGA_031058.2
Lotus japonicus
LjSGA_031058.2
I
0.000
LPERR11G18320
Leersia perrieri
LPERR11G18320
N
0.000
Lus10019089.g
Linum usitatissimum
Lus10019089.g
I
0.000
Lus10026613.g
Linum usitatissimum
Lus10026613.g
I
0.000
Lus10030450.g
Linum usitatissimum
Lus10030450.g
I
0.000
Lus10034464.g
Linum usitatissimum
Lus10034464.g
I
0.000
MDP0000146231
Malus domestica
MDP0000146231
I
0.000
MDP0000146415
Malus domestica
MDP0000146415
I
0.000
MDP0000147667
Malus domestica
MDP0000147667
I
0.000
MDP0000193129
Malus domestica
MDP0000193129
I
0.000
MDP0000773068
Malus domestica
MDP0000773068
I
0.000
MDP0000919323
Malus domestica
MDP0000919323
I
0.000
mgf000945m
Mimulus guttatus
mgf000945m
I
0.000
mgf004425m
Mimulus guttatus
mgf004425m
I
0.000
MLOC_11474
Hordeum vulgare
MLOC_11474
I
0.000
MTR_4g108720
Medicago truncatula
MTR_4g108720
I
0.000
MTR_5g041650
Medicago truncatula
MTR_5g041650
I
0.000
OBART11G21780
Oryza barthii
OBART11G21780
N
0.000
OGLUM11G21110
Oryza glumaepatula
OGLUM11G21110
N
0.000
OLONG_008007
Oryza longistaminata
OLONG_008007
N
0.000
OMERI11G18020
Oryza meridionalis
OMERI11G18020
N
0.000
OPUNC11G18320
Oryza punctata
OPUNC11G18320
N
0.000
orange1.1g017511m.g
Citrus sinensis
orange1.1g017511m.g
I
0.000
orange1.1g018825m.g
Citrus sinensis
orange1.1g018825m.g
I
0.000
ORGLA11G0175900
Oryza glaberrima
ORGLA11G0175900
N
0.000
ORUFI11G23650
Oryza rufipogon
ORUFI11G23650
N
0.000
OS11G0658700
Oryza sativa
OS11G0658700
N
0.000
Pavir.Hb00170
Panicum virgatum
Pavir.Hb00170
I
0.000
Pavir.J04162
Panicum virgatum
Pavir.J04162
I
0.000
PDK_20s1342861g001
Phoenix dactylifera
PDK_20s1342861g001
I
0.000
PDK_20s1352301g001
Phoenix dactylifera
PDK_20s1352301g001
I
0.000
PGSC0003DMG400019525
Solanum tuberosum
PGSC0003DMG400019525
N
0.000
PK03147.1
Cannabis sativa
PK03147.1
I
0.000
PK21701.1
Cannabis sativa
PK21701.1
I
0.000
Pm006479
Prunus mume
Pm006479
I
0.000
Pm024895
Prunus mume
Pm024895
I
0.000
POPTR_0008s08780
Populus trichocarpa
POPTR_0008s08780
I
0.000
POPTR_0010s17450
Populus trichocarpa
POPTR_0010s17450
N
0.000
PRUPE_ppa015857mg
Prunus persica
PRUPE_ppa015857mg
I
0.000
PRUPE_ppa017562mg
Prunus persica
PRUPE_ppa017562mg
I
0.000
SapurV1A.0149s0010
Salix purpurea
SapurV1A.0149s0010
N
0.000
SapurV1A.0458s0040
Salix purpurea
SapurV1A.0458s0040
I
0.000
Sb05g025970
Sorghum bicolor
Sb05g025970
I
0.000
Si028357m.g
Setaria italica
Si028357m.g
N
0.000
Solyc03g115910.1
Solanum lycopersicum
Solyc03g115910.1
I
0.000
TCM_011687
Theobroma cacao
TCM_011687
I
0.000
TCM_014051
Theobroma cacao
TCM_014051
I
0.000
Thhalv10004409m.g
Eutrema salsugineum
Thhalv10004409m.g
I
0.000
Thhalv10007954m.g
Eutrema salsugineum
Thhalv10007954m.g
I
0.000
Thhalv10019726m.g
Eutrema salsugineum
Thhalv10019726m.g
I
0.000
Thhalv10019839m.g
Eutrema salsugineum
Thhalv10019839m.g
I
0.000
Traes_4AL_8DBE120BC
Triticum aestivum
Traes_4AL_8DBE120BC
I
0.000
Traes_4BS_8B4AFA7C2
Triticum aestivum
Traes_4BS_8B4AFA7C2
I
0.000
Traes_4DS_4C4EB1D21
Triticum aestivum
Traes_4DS_4C4EB1D21
I
0.000
TRIUR3_33223
Triticum urartu
TRIUR3_33223
I
0.000