Pvit_03833 (Pogona vitticeps)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04516 (CP2) IPR007604 Pvit_03833 T199555_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRHL2
M08129_2.00 		Homo sapiens
NNNAACTGGTTTNNN
NNNAAACCAGTTNNN		 ChIP-seq
Mathelier et al.(2014)
MA1105.1 		0.928 0.928
GRHL2
M09125_2.00 		Homo sapiens
AACYDGYYBDDC
GHHVRRCHRGTT		 Misc
Kulakovskiy et al.(2013)
GRHL2_HUMAN.H11MO.0.A 		0.928 0.928
Grhl2
M09126_2.00 		Mus musculus
RDCCDGTYYKDC
GHMRRACHGGHY		 Misc
Kulakovskiy et al.(2013)
GRHL2_MOUSE.H11MO.0.A 		0.928 0.928
GRHL2
M09558_2.00 		Homo sapiens
NRAACHDGHHDDDCHDGTTY
RAACHDGHHHDDCHDGTTYN		 Misc
Heinz et al.(2010)
HBE-GRHL2_GSE46194 		0.928 0.928
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_03833 Grainyhead 209 433

Links

Other Grainyhead family TFs
Other Pogona vitticeps TFs

118 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27810.m000639 Ricinus communis 27810.m000639 I
29729.m002292 Ricinus communis 29729.m002292 I
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I
BGIOSGA002846 Oryza indica BGIOSGA002846 I
BGIOSGA011963 Oryza indica BGIOSGA011963 I
Bo4g190040 Brassica oleracea Bo4g190040 I
Bo9g155940 Brassica oleracea Bo9g155940 I
Bo9g177130 Brassica oleracea Bo9g177130 I
Bostr.19424s1037 Boechera stricta Bostr.19424s1037 I
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I
Bra002159 Brassica rapa Bra002159 I
Bra017011 Brassica rapa Bra017011 I
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I
Carubv10002425m.g Capsella rubella Carubv10002425m.g I
cassava15495.m1 Manihot esculenta cassava15495.m1 I
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I
cassava39243.m1 Manihot esculenta cassava39243.m1 I
Ca_07264 Cicer arietinum Ca_07264 I
Ca_12446 Cicer arietinum Ca_12446 I
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I
Cla006713 Citrullus lanatus Cla006713 I
Cucsa.136780 Cucumis sativus Cucsa.136780 I
DREB2A Oryza sativa OS01G0165000 I
DREB2E Oryza sativa OS03G0174400 I
DREB2G Arabidopsis thaliana AT5G18450 D
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I
e_gw1.292.36.1 Physcomitrella patens e_gw1.292.36.1 I
F775_05774 Aegilops tauschii F775_05774 I
F775_32062 Aegilops tauschii F775_32062 I
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I
GLYMA02G31350 Glycine max GLYMA02G31350 I
GLYMA03G29530 Glycine max GLYMA03G29530 I
GLYMA06G45680 Glycine max GLYMA06G45680 I
GLYMA10G21850 Glycine max GLYMA10G21850 I
GLYMA14G32210 Glycine max GLYMA14G32210 I
GLYMA19G32380 Glycine max GLYMA19G32380 I
Gorai.007G359400 Gossypium raimondii Gorai.007G359400 I
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I
Gorai.011G235900 Gossypium raimondii Gorai.011G235900 I
GRMZM2G006745 Zea mays GRMZM2G006745 I
GRMZM2G156737 Zea mays GRMZM2G156737 I
GRMZM2G399098 Zea mays GRMZM2G399098 I
GRMZM2G419901 Zea mays GRMZM2G419901 I
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I
LPERR01G03760 Leersia perrieri LPERR01G03760 I
Lus10003581.g Linum usitatissimum Lus10003581.g I
Lus10011319.g Linum usitatissimum Lus10011319.g I
Lus10012210.g Linum usitatissimum Lus10012210.g I
Lus10012226.g Linum usitatissimum Lus10012226.g I
Lus10023633.g Linum usitatissimum Lus10023633.g I
Lus10034902.g Linum usitatissimum Lus10034902.g I
MDP0000147009 Malus domestica MDP0000147009 I
MDP0000153866 Malus domestica MDP0000153866 I
MDP0000165880 Malus domestica MDP0000165880 I
MDP0000290585 Malus domestica MDP0000290585 I
MDP0000446783 Malus domestica MDP0000446783 I
MDP0000703626 Malus domestica MDP0000703626 I
MDP0000871361 Malus domestica MDP0000871361 I
MDP0000880312 Malus domestica MDP0000880312 I
mgf017629m Mimulus guttatus mgf017629m I
MLOC_66686 Hordeum vulgare MLOC_66686 I
MTR_5g083330 Medicago truncatula MTR_5g083330 I
MTR_5g083340 Medicago truncatula MTR_5g083340 I
MTR_7g092190 Medicago truncatula MTR_7g092190 I
OB01G13930 Oryza brachyantha OB01G13930 I
OBART01G04210 Oryza barthii OBART01G04210 I
OBART03G05550 Oryza barthii OBART03G05550 I
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I
OLONG_014228 Oryza longistaminata OLONG_014228 I
OMERI01G04110 Oryza meridionalis OMERI01G04110 I
OMERI03G05220 Oryza meridionalis OMERI03G05220 I
ONIVA01G04630 Oryza nivara ONIVA01G04630 I
ONIVA03G05350 Oryza nivara ONIVA03G05350 I
OPUNC01G03970 Oryza punctata OPUNC01G03970 I
OPUNC03G05230 Oryza punctata OPUNC03G05230 I
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I
Pavir.J37967 Panicum virgatum Pavir.J37967 I
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I
PK07402.1 Cannabis sativa PK07402.1 D
PK07829.1 Cannabis sativa PK07829.1 I
PK08602.1 Cannabis sativa PK08602.1 D
Pm003634 Prunus mume Pm003634 I
Pm015262 Prunus mume Pm015262 I
Pm018989 Prunus mume Pm018989 I
Pm025865 Prunus mume Pm025865 I
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I
PRUPE_ppa009616mg Prunus persica PRUPE_ppa009616mg I
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I
PRUPE_ppa022996mg Prunus persica PRUPE_ppa022996mg I
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I
Q1ESI9_MAIZE Zea mays Q1ESI9_MAIZE D
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I
Sb03g004980 Sorghum bicolor Sb03g004980 I
Sb09g016150 Sorghum bicolor Sb09g016150 I
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I
Si002067m.g Setaria italica Si002067m.g I
Si022619m.g Setaria italica Si022619m.g I
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I
TCM_024756 Theobroma cacao TCM_024756 I
TCM_043275 Theobroma cacao TCM_043275 I
TCM_043302 Theobroma cacao TCM_043302 I
TCM_043306 Theobroma cacao TCM_043306 I
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I
Traes_5BL_7F0FD1538 Triticum aestivum Traes_5BL_7F0FD1538 I
TRIUR3_17409 Triticum urartu TRIUR3_17409 I
TRIUR3_17973 Triticum urartu TRIUR3_17973 I
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I