Bo7g081380 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo7g081380 T267488_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EFM
M07044_2.00 		Arabidopsis thaliana
NNGAATATTCY
RGAATATTCNN		 Dap-seq
OMalley et al.(2016)
At2g03500_col_a 		0.909 1.000
EFM
M07045_2.00 		Arabidopsis thaliana
RGAATCHWAGATTC
GAATCTWDGATTCY		 Dap-seq
OMalley et al.(2016)
At2g03500_colamp_a 		0.909 1.000
NIGT1
M02328_2.00 		Oryza sativa
NNKATHCNNN
NNNGDATMNN		 PBM
Weirauch et al.(2014)
pTH8646 		0.843 0.915
HHO3
M02289_2.00 		Arabidopsis thaliana
NWGATWCBNN
NNVGWATCWN		 PBM
Weirauch et al.(2014)
pTH7278 		0.835 0.894
HHO3
M07016_2.00 		Arabidopsis thaliana
NNDHNNAAKATTCY
RGAATMTTNNDHNN		 Dap-seq
OMalley et al.(2016)
At1g25550_colamp_a 		0.835 0.894
HHO3
M07017_2.00 		Arabidopsis thaliana
HNNAAKATTCY
RGAATMTTNND		 Dap-seq
OMalley et al.(2016)
At1g25550_col 		0.835 0.894
HHO2
M02290_2.00 		Arabidopsis thaliana
NNKATHCNNN
NNNGDATMNN		 PBM
Weirauch et al.(2014)
pTH7115 		0.817 0.872
HHO2
M07029_2.00 		Arabidopsis thaliana
AKATTCY
RGAATMT		 Dap-seq
OMalley et al.(2016)
At1g68670_colamp_a 		0.817 0.872
HHO2
M07030_2.00 		Arabidopsis thaliana
RDATYNNAGATTC
GAATCTNNRATHY		 Dap-seq
OMalley et al.(2016)
At1g68670_col 		0.817 0.872
PK19779.1
M02354_2.00 		Cannabis sativa
NNKATNCNNN
NNNGNATMNN		 PBM
Weirauch et al.(2014)
pTH9610 		0.794 0.872
HHO6
M07024_2.00 		Arabidopsis thaliana
GAATCTNNDAT
ATHNNAGATTC		 Dap-seq
OMalley et al.(2016)
AT1G49560_col_a 		0.776 0.851
HHO6
M07025_2.00 		Arabidopsis thaliana
DGAATCTHNGATHCN
NGDATCNDAGATTCH		 Dap-seq
OMalley et al.(2016)
AT1G49560_colamp_a 		0.776 0.851
HRS1
M02284_2.00 		Arabidopsis thaliana
AGATTCYN
NRGAATCT		 PBM
Weirauch et al.(2014)
pTH7118 		0.775 0.851
HRS1
M01068_2.00 		Arabidopsis thaliana
NAGATTCBNN
NNVGAATCTN		 PBM
Sullivan et al.(2014)
pTH7648 		0.775 0.851
HRS1
M07004_2.00 		Arabidopsis thaliana
NDDWWVNAAKATTCY
RGAATMTTNBWWHHN		 Dap-seq
OMalley et al.(2016)
At1g13300_col_a 		0.775 0.851
PK14402.1
M02352_2.00 		Cannabis sativa
NDWGATTCSNN
NNSGAATCWHN		 PBM
Weirauch et al.(2014)
pTH9491 		0.754 0.851
HHO5
M07112_2.00 		Arabidopsis thaliana
HNDAAGATTCH
DGAATCTTHND		 Dap-seq
OMalley et al.(2016)
AT4G37180_col_a 		0.711 0.809
HHO5
M07113_2.00 		Arabidopsis thaliana
NNDAAGATTCY
RGAATCTTHNN		 Dap-seq
OMalley et al.(2016)
AT4G37180_colamp_a 		0.711 0.809
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g081380.1 Myb 225 276

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

366 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I
ALUE_0000387101 Ascaris lumbricoides ALUE_0000387101 I
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I
ANCCAN_08267 Ancylostoma caninum ANCCAN_08267 I
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I
ANCCAN_22066 Ancylostoma caninum ANCCAN_22066 I
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I
ANCCEY_12461 Ancylostoma ceylanicum ANCCEY_12461 I
ANCDUO_15746 Ancylostoma duodenale ANCDUO_15746 I
ASIM_0001423201 Anisakis simplex ASIM_0001423201 I
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I
ASIM_0001848201 Anisakis simplex ASIM_0001848201 N
ASU_00859 Ascaris suum ASU_00859 I
ASU_00971 Ascaris suum ASU_00971 I
ASU_03657 Ascaris suum ASU_03657 I
ASU_03870 Ascaris suum ASU_03870 I
ASU_12501 Ascaris suum ASU_12501 I
ASU_13587 Ascaris suum ASU_13587 I
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 I
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 I
Bm4980 Brugia malayi Bm4980 I
Bm5319 Brugia malayi Bm5319 I
BTMF_0000217201 Brugia timori BTMF_0000217201 I
BTMF_0000941401 Brugia timori BTMF_0000941401 I
BTMF_0001388101 Brugia timori BTMF_0001388101 I
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I
BXY_1057700 Bursaphelenchus xylophilus BXY_1057700 I
BXY_1375200 Bursaphelenchus xylophilus BXY_1375200 I
CBG01866 Caenorhabditis briggsae CBG01866 I
CBG03844 Caenorhabditis briggsae CBG03844 I
CBG03848 Caenorhabditis briggsae CBG03848 I
CBG04204 Caenorhabditis briggsae CBG04204 I
CBG10855 Caenorhabditis briggsae CBG10855 I
CBG14485 Caenorhabditis briggsae CBG14485 I
CBG16594 Caenorhabditis briggsae CBG16594 I
CBG22587 Caenorhabditis briggsae CBG22587 I
CBN11344 Caenorhabditis brenneri CBN11344 I
CBN11572 Caenorhabditis brenneri CBN11572 I
CBN14643 Caenorhabditis brenneri CBN14643 I
CBN18198 Caenorhabditis brenneri CBN18198 I
CBN18824 Caenorhabditis brenneri CBN18824 I
CBN19235 Caenorhabditis brenneri CBN19235 I
CBN19472 Caenorhabditis brenneri CBN19472 I
CBN20518 Caenorhabditis brenneri CBN20518 I
CBN20749 Caenorhabditis brenneri CBN20749 I
CBN24827 Caenorhabditis brenneri CBN24827 I
CJA08896 Caenorhabditis japonica CJA08896 I
CJA13458 Caenorhabditis japonica CJA13458 I
CJA14248 Caenorhabditis japonica CJA14248 I
CJA14599 Caenorhabditis japonica CJA14599 I
CJA16040 Caenorhabditis japonica CJA16040 I
CRE00149 Caenorhabditis remanei CRE00149 I
CRE00809 Caenorhabditis remanei CRE00809 I
CRE03310 Caenorhabditis remanei CRE03310 I
CRE07033 Caenorhabditis remanei CRE07033 I
CRE08089 Caenorhabditis remanei CRE08089 I
CRE08259 Caenorhabditis remanei CRE08259 I
CRE10779 Caenorhabditis remanei CRE10779 I
CRE25378 Caenorhabditis remanei CRE25378 I
CRE26981 Caenorhabditis remanei CRE26981 I
CRE30089 Caenorhabditis remanei CRE30089 I
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I
DME_0000591901 Dracunculus medinensis DME_0000591901 I
DME_0000693601 Dracunculus medinensis DME_0000693601 I
DME_0000747901 Dracunculus medinensis DME_0000747901 I
EEL_0000204901 Elaeophora elaphi EEL_0000204901 I
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I
EVEC_0000864401 Enterobius vermicularis EVEC_0000864401 I
EVEC_0001195701 Enterobius vermicularis EVEC_0001195701 I
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I
GPLIN_000284100 Globodera pallida GPLIN_000284100 I
GPLIN_000337500 Globodera pallida GPLIN_000337500 I
GPLIN_001175700 Globodera pallida GPLIN_001175700 I
HCOI00592600 Haemonchus contortus HCOI00592600 I
HCOI00601000 Haemonchus contortus HCOI00601000 I
HCOI00618700 Haemonchus contortus HCOI00618700 I
HCOI00891400 Haemonchus contortus HCOI00891400 I
HCOI01292200 Haemonchus contortus HCOI01292200 I
HCOI01554200 Haemonchus contortus HCOI01554200 I
HCOI01927800 Haemonchus contortus HCOI01927800 I
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I
L596_g11029 Steinernema carpocapsae L596_g11029 I
L596_g11035 Steinernema carpocapsae L596_g11035 I
L596_g12276 Steinernema carpocapsae L596_g12276 I
L596_g12321 Steinernema carpocapsae L596_g12321 I
L596_g23123 Steinernema carpocapsae L596_g23123 I
L596_g23777 Steinernema carpocapsae L596_g23777 I
L596_g25910 Steinernema carpocapsae L596_g25910 I
L596_g7829 Steinernema carpocapsae L596_g7829 I
L889_g11570 Steinernema feltiae L889_g11570 I
L889_g1557 Steinernema feltiae L889_g1557 I
L889_g17247 Steinernema feltiae L889_g17247 I
L889_g17254 Steinernema feltiae L889_g17254 I
L889_g1891 Steinernema feltiae L889_g1891 I
L889_g29879 Steinernema feltiae L889_g29879 I
L889_g31970 Steinernema feltiae L889_g31970 I
L889_g7780 Steinernema feltiae L889_g7780 I
L892_g1520 Steinernema scapterisci L892_g1520 I
L892_g17612 Steinernema scapterisci L892_g17612 I
L892_g3438 Steinernema scapterisci L892_g3438 I
L892_g4134 Steinernema scapterisci L892_g4134 I
L892_g4169 Steinernema scapterisci L892_g4169 I
L892_g8671 Steinernema scapterisci L892_g8671 I
L893_g13285 Steinernema glaseri L893_g13285 I
L893_g21283 Steinernema glaseri L893_g21283 I
L893_g25227 Steinernema glaseri L893_g25227 I
L893_g263 Steinernema glaseri L893_g263 I
L893_g28857 Steinernema glaseri L893_g28857 I
L893_g3010 Steinernema glaseri L893_g3010 I
L893_g3565 Steinernema glaseri L893_g3565 I
L898_g11608 Steinernema monticolum L898_g11608 I
L898_g22454 Steinernema monticolum L898_g22454 I
L898_g23058 Steinernema monticolum L898_g23058 I
L898_g26357 Steinernema monticolum L898_g26357 I
L898_g2764 Steinernema monticolum L898_g2764 I
L898_g7537 Steinernema monticolum L898_g7537 I
L898_g9866 Steinernema monticolum L898_g9866 I
LOAG_00300 Loa loa LOAG_00300 I
LOAG_08615 Loa loa LOAG_08615 I
LOAG_08636 Loa loa LOAG_08636 I
LOAG_16377 Loa loa LOAG_16377 I
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I
MhA1_Contig691.frz3.gene13 Meloidogyne hapla MhA1_Contig691.frz3.gene13 I
MhA1_Contig70.frz3.gene31 Meloidogyne hapla MhA1_Contig70.frz3.gene31 I
MhA1_Contig817.frz3.gene1 Meloidogyne hapla MhA1_Contig817.frz3.gene1 I
Minc02318 Meloidogyne incognita Minc02318 I
Minc05752 Meloidogyne incognita Minc05752 I
Minc11307 Meloidogyne incognita Minc11307 I
Minc13747 Meloidogyne incognita Minc13747 I
Minc17538 Meloidogyne incognita Minc17538 I
nAv.1.0.1.g09196 Acanthocheilonema viteae nAv.1.0.1.g09196 I
NBR_0000015501 Nippostrongylus brasiliensis NBR_0000015501 I
NBR_0001473401 Nippostrongylus brasiliensis NBR_0001473401 I
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I
nDi.2.2.2.g09348 Dirofilaria immitis nDi.2.2.2.g09348 I
NECAME_00872 Necator americanus NECAME_00872 I
NECAME_02375 Necator americanus NECAME_02375 I
NECAME_08394 Necator americanus NECAME_08394 I
NECAME_11999 Necator americanus NECAME_11999 I
nhr-1 Caenorhabditis elegans WBGene00003600 D
nhr-10 Caenorhabditis elegans WBGene00003609 I
nhr-120 Caenorhabditis elegans WBGene00003710 I
nhr-34 Caenorhabditis elegans WBGene00003627 D
nhr-35 Caenorhabditis elegans WBGene00003628 I
nhr-49 Caenorhabditis elegans WBGene00003639 D
nhr-64 Caenorhabditis elegans WBGene00003654 I
nhr-69 Caenorhabditis elegans WBGene00003659 I
nLs.2.1.2.g04051 Litomosoides sigmodontis nLs.2.1.2.g04051 I
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I
nOo.2.0.1.g03859 Onchocerca ochengi nOo.2.0.1.g03859 I
nRc.2.0.1.g16639 Romanomermis culicivorax nRc.2.0.1.g16639 I
OESDEN_04341 Oesophagostomum dentatum OESDEN_04341 I
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I
PPA06637 Pristionchus pacificus PPA06637 I
PPA21777 Pristionchus pacificus PPA21777 I
PPA22443 Pristionchus pacificus PPA22443 I
PPA29597 Pristionchus pacificus PPA29597 I
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I
PTRK_0000861400 Parastrongyloides trichosuri PTRK_0000861400 I
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I
RSKR_0001067400 Rhabditophanes kr3021 RSKR_0001067400 I
RSKR_0001171300 Rhabditophanes kr3021 RSKR_0001171300 I
SBAD_0000391501 Soboliphyme baturini SBAD_0000391501 I
scaffold1039-EXSNAP2012.5 Pristionchus exspectatus scaffold1039-EXSNAP2012.5 I
scaffold107-EXSNAP2012.33 Pristionchus exspectatus scaffold107-EXSNAP2012.33 I
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I
scaffold488-EXSNAP2012.17 Pristionchus exspectatus scaffold488-EXSNAP2012.17 I
scaffold552-EXSNAP2012.18 Pristionchus exspectatus scaffold552-EXSNAP2012.18 I
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I
scaffold92-EXSNAP2012.31 Pristionchus exspectatus scaffold92-EXSNAP2012.31 N
SMUV_0000369301 Syphacia muris SMUV_0000369301 I
SMUV_0000708401 Syphacia muris SMUV_0000708401 I
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I
SPAL_0001213800 Strongyloides papillosus SPAL_0001213800 I
SPAL_0001238400 Strongyloides papillosus SPAL_0001238400 I
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I
SSTP_0001170700 Strongyloides stercoralis SSTP_0001170700 I
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I
SVE_0639400 Strongyloides venezuelensis SVE_0639400 I
SVE_0697700 Strongyloides venezuelensis SVE_0697700 I
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I
SVUK_0000195901 Strongylus vulgaris SVUK_0000195901 I
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I
TCLT_0000612301 Thelazia callipaeda TCLT_0000612301 I
TELCIR_07460 Teladorsagia circumcincta TELCIR_07460 I
TMUE_s0002006800 Trichuris muris TMUE_s0002006800 I
WBGene00236987 Onchocerca volvulus WBGene00236987 I
WBGene00240403 Onchocerca volvulus WBGene00240403 I
WBGene00240560 Onchocerca volvulus WBGene00240560 I
WBGene00241993 Onchocerca volvulus WBGene00241993 I
WUBG_17449 Wuchereria bancrofti WUBG_17449 N