CRE11852 (Caenorhabditis remanei)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 CRE11852 T327229_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
CRE11852 Sox 28 92

Links

Other Sox family TFs
Other Caenorhabditis remanei TFs

210 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AABR07009373.1 Rattus norvegicus ENSRNOG00000011429 I 0.428
AAEL011425 Aedes aegypti AAEL011425 I 0.480
ACAC_0000817201 Angiostrongylus cantonensis ACAC_0000817201 N 0.697
ACAC_0000857301 Angiostrongylus cantonensis ACAC_0000857301 N 0.476
ACOC_0000235301 Angiostrongylus costaricensis ACOC_0000235301 N 0.691
ACOC_0000653601 Angiostrongylus costaricensis ACOC_0000653601 N 0.476
ALUE_0000365901 Ascaris lumbricoides ALUE_0000365901 N 0.661
ALUE_0000448701 Ascaris lumbricoides ALUE_0000448701 N 0.455
ALUE_0000605501 Ascaris lumbricoides ALUE_0000605501 N 0.498
ALUE_0001190701 Ascaris lumbricoides ALUE_0001190701 N 0.481
AMAG_00757 Allomyces macrogynus AMAG_00757 N 0.448
AMAG_02260 Allomyces macrogynus AMAG_02260 N 0.448
ANCCAN_04253 Ancylostoma caninum ANCCAN_04253 N 0.485
ANCCAN_08230 Ancylostoma caninum ANCCAN_08230 I 0.523
ANCCAN_12424 Ancylostoma caninum ANCCAN_12424 I 0.541
ANCCAN_17708 Ancylostoma caninum ANCCAN_17708 I 0.541
ANCCAN_21637 Ancylostoma caninum ANCCAN_21637 N 0.466
ANCCAN_21638 Ancylostoma caninum ANCCAN_21638 I 0.541
ANCCEY_04224 Ancylostoma ceylanicum ANCCEY_04224 N 0.697
ANCCEY_10464 Ancylostoma ceylanicum ANCCEY_10464 N 0.466
ANCDUO_10137 Ancylostoma duodenale ANCDUO_10137 N 0.561
ANCDUO_11855 Ancylostoma duodenale ANCDUO_11855 N 0.466
ANCDUO_11856 Ancylostoma duodenale ANCDUO_11856 I 0.541
ANCDUO_12352 Ancylostoma duodenale ANCDUO_12352 N 0.697
ANCDUO_24920 Ancylostoma duodenale ANCDUO_24920 I 0.541
ANCDUO_26276 Ancylostoma duodenale ANCDUO_26276 N 0.497
ASIM_0000156001 Anisakis simplex ASIM_0000156001 N 0.454
ASIM_0001147101 Anisakis simplex ASIM_0001147101 N 0.598
ASIM_0001178701 Anisakis simplex ASIM_0001178701 N 0.714
ASU_05752 Ascaris suum ASU_05752 N 0.455
ASU_05994 Ascaris suum ASU_05994 N 0.702
ASU_07820 Ascaris suum ASU_07820 N 0.498
ASU_09087 Ascaris suum ASU_09087 N 0.661
A_01848 Schistosoma haematobium A_01848 N 0.421
BGIBMGA005288 Bombyx mori BGIBMGA005288 N 0.462
BGIBMGA005289 Bombyx mori BGIBMGA005289 I 0.415
Bm6643 Brugia malayi Bm6643 N 0.474
Bm8632 Brugia malayi Bm8632 N 0.625
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I 0.630
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I 0.617
CapteG172235 Capitella teleta CapteG172235 I 0.465
cassava23716.valid.m1 Manihot esculenta cassava23716.valid.m1 I 0.438
CBG04066 Caenorhabditis briggsae CBG04066 N 0.471
CBG09136 Caenorhabditis briggsae CBG09136 N 0.481
CBG20663 Caenorhabditis briggsae CBG20663 N 0.559
CBN04053 Caenorhabditis brenneri CBN04053 N 0.494
CBN25379 Caenorhabditis brenneri CBN25379 I 0.515
Cflo_05893--XP_624266.1_APIME Camponotus floridanus Cflo_05893--XP_624266.1_APIME N 0.454
Cflo_11824--XP_001120264.1_APIME Camponotus floridanus Cflo_11824--XP_001120264.1_APIME N 0.419
CJA04355 Caenorhabditis japonica CJA04355 N 0.721
CJA19030 Caenorhabditis japonica CJA19030 N 0.426
CPIJ002953 Culex quinquefasciatus CPIJ002953 N 0.453
CPIJ020011 Culex quinquefasciatus CPIJ020011 I 0.453
CpipJ_CPIJ002953 Culex pipiens CpipJ_CPIJ002953 N 0.453
CpipJ_CPIJ020011 Culex pipiens CpipJ_CPIJ020011 I 0.453
CRE03995 Caenorhabditis remanei CRE03995 N 0.481
DICVIV_01337 Dictyocaulus viviparus DICVIV_01337 N 0.466
DICVIV_05502 Dictyocaulus viviparus DICVIV_05502 N 0.691
DME_0000779601 Dracunculus medinensis DME_0000779601 N 0.697
ECANG7_00770 Echinococcus canadensis ECANG7_00770 N 0.433
EmuJ_000894800 Echinococcus multilocularis EmuJ_000894800 N 0.433
ENSCJAG00000005187 Callithrix jacchus ENSCJAG00000005187 I 0.446
ENSCJAG00000031139 Callithrix jacchus ENSCJAG00000031139 I 0.452
ENSMMUG00000031258 Macaca mulatta ENSMMUG00000031258 I 0.441
ENSOGAG00000026034 Otolemur garnettii ENSOGAG00000026034 I 0.451
ENSOGAG00000031524 Otolemur garnettii ENSOGAG00000031524 I 0.434
EVEC_0000079801 Enterobius vermicularis EVEC_0000079801 N 0.625
EVEC_0000171701 Enterobius vermicularis EVEC_0000171701 N 0.436
GA14726 Drosophila pseudoobscura FBgn0074753 I 0.437
GB47837 Apis mellifera GB47837 N 0.454
GB54571 Apis mellifera GB54571 N 0.419
GD25013 Drosophila simulans FBgn0196325 N 0.476
GD25171 Drosophila simulans FBgn0196483 I 0.437
GE11532 Drosophila yakuba FBgn0229332 N 0.476
GF11622 Drosophila ananassae FBgn0088662 I 0.437
GF12460 Drosophila ananassae FBgn0089497 N 0.476
GG19998 Drosophila erecta FBgn0112197 N 0.476
GG20749 Drosophila erecta FBgn0112936 I 0.437
GH20784 Drosophila grimshawi FBgn0128247 I 0.437
GH21151 Drosophila grimshawi FBgn0128613 N 0.463
GI18750 Drosophila mojavensis FBgn0141489 N 0.489
GI20867 Drosophila mojavensis FBgn0143601 I 0.437
GJ20604 Drosophila virilis FBgn0207743 I 0.437
GJ21774 Drosophila virilis FBgn0208892 N 0.476
GK15658 Drosophila willistoni FBgn0217663 I 0.437
GK22092 Drosophila willistoni FBgn0224077 N 0.505
GL11071 Drosophila persimilis FBgn0148681 N 0.503
GL17523 Drosophila persimilis FBgn0155126 I 0.437
GM15692 Drosophila sechellia FBgn0170608 I 0.437
Hba_18326 Heterorhabditis bacteriophora Hba_18326 I 0.496
HCOI00417600 Haemonchus contortus HCOI00417600 N 0.466
HCOI01420700 Haemonchus contortus HCOI01420700 N 0.539
HCOI01550200 Haemonchus contortus HCOI01550200 N 0.697
HCOI01912600 Haemonchus contortus HCOI01912600 I 0.476
HCOI01913300 Haemonchus contortus HCOI01913300 I 0.476
HCOI02106600 Haemonchus contortus HCOI02106600 N 0.539
HDID_0000239001 Hymenolepis diminuta HDID_0000239001 N 0.432
HMEL015307 Heliconius melpomene HMEL015307 N 0.462
hmg-1.1 Caenorhabditis elegans WBGene00001971 N 0.731
hmg-4 Caenorhabditis elegans WBGene00001974 N 0.481
HMGB2 Ochotona princeps ENSOPRG00000010124 I 0.416
HmgZ Drosophila melanogaster FBgn0010228 I 0.437
HmgZ Drosophila yakuba FBgn0068145 I 0.437
HmN_000028000 Hymenolepis microstoma HmN_000028000 N 0.472
HPBE_0002310801 Heligmosomoides bakeri HPBE_0002310801 N 0.472
HPBE_0002408301 Heligmosomoides bakeri HPBE_0002408301 I 0.530
HPLM_0000803901 Haemonchus placei HPLM_0000803901 N 0.466
HPLM_0001324601 Haemonchus placei HPLM_0001324601 N 0.697
Hsal_00538--XP_001120264.1_APIME Harpegnathos saltator Hsal_00538--XP_001120264.1_APIME N 0.419
Hsal_13112--XP_624266.1_APIME Harpegnathos saltator Hsal_13112--XP_624266.1_APIME N 0.454
KGM_13851 Danaus plexippus KGM_13851 N 0.443
KGM_13852 Danaus plexippus KGM_13852 I 0.415
L596_g16476 Steinernema carpocapsae L596_g16476 N 0.665
L596_g28088 Steinernema carpocapsae L596_g28088 N 0.697
L596_g8199 Steinernema carpocapsae L596_g8199 N 0.449
L889_g16198 Steinernema feltiae L889_g16198 N 0.636
L889_g27280 Steinernema feltiae L889_g27280 N 0.440
L889_g29516 Steinernema feltiae L889_g29516 N 0.526
L889_g30211 Steinernema feltiae L889_g30211 N 0.451
L889_g6592 Steinernema feltiae L889_g6592 N 0.558
L889_g9094 Steinernema feltiae L889_g9094 N 0.695
L892_g19058 Steinernema scapterisci L892_g19058 N 0.697
L892_g23618 Steinernema scapterisci L892_g23618 N 0.667
L892_g2503 Steinernema scapterisci L892_g2503 N 0.449
L893_g23503 Steinernema glaseri L893_g23503 N 0.640
L893_g29974 Steinernema glaseri L893_g29974 N 0.697
L898_g4830 Steinernema monticolum L898_g4830 N 0.697
L898_g7743 Steinernema monticolum L898_g7743 N 0.634
LCUP005047 Lucilia cuprina LCUP005047 N 0.438
LDEC020995 Leptinotarsa decemlineata LDEC020995 N 0.479
LOAG_08062 Loa loa LOAG_08062 N 0.625
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N 0.539
MCINX001064 Melitaea cinxia MCINX001064 I 0.415
MDOA007633 Musca domestica MDOA007633 N 0.476
MDOA014797 Musca domestica MDOA014797 I 0.431
mgf024995m Mimulus guttatus mgf024995m I 0.417
MhA1_Contig128.frz3.gene5 Meloidogyne hapla MhA1_Contig128.frz3.gene5 N 0.444
MhA1_Contig2971.frz3.fgene1 Meloidogyne hapla MhA1_Contig2971.frz3.fgene1 N 0.444
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N 0.539
Minc01744 Meloidogyne incognita Minc01744 N 0.450
Minc03634 Meloidogyne incognita Minc03634 N 0.539
Minc04648 Meloidogyne incognita Minc04648 N 0.539
Minc10016 Meloidogyne incognita Minc10016 N 0.450
MTR_5g082570 Medicago truncatula MTR_5g082570 I 0.421
nAv.1.0.1.g08227 Acanthocheilonema viteae nAv.1.0.1.g08227 N 0.625
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N 0.561
NBR_0001132501 Nippostrongylus brasiliensis NBR_0001132501 N 0.466
NBR_0001277401 Nippostrongylus brasiliensis NBR_0001277401 N 0.697
nDi.2.2.2.g04713 Dirofilaria immitis nDi.2.2.2.g04713 N 0.474
nDi.2.2.2.g08508 Dirofilaria immitis nDi.2.2.2.g08508 N 0.625
NECAME_10840 Necator americanus NECAME_10840 N 0.466
NECAME_16525 Necator americanus NECAME_16525 N 0.561
NECAME_17555 Necator americanus NECAME_17555 N 0.682
NECAME_17981 Necator americanus NECAME_17981 N 0.682
nLs.2.1.2.g02941 Litomosoides sigmodontis nLs.2.1.2.g02941 N 0.474
nLs.2.1.2.g04082 Litomosoides sigmodontis nLs.2.1.2.g04082 N 0.625
nOo.2.0.1.g04693 Onchocerca ochengi nOo.2.0.1.g04693 N 0.625
OESDEN_09619 Oesophagostomum dentatum OESDEN_09619 N 0.697
OSTLU_18991 Ostreococcus lucimarinus OSTLU_18991 N 0.423
OSTLU_31946 Ostreococcus lucimarinus OSTLU_31946 I 0.496
Ppa-hmg-1.1 Pristionchus pacificus PPA22767 N 0.688
PPA02261 Pristionchus pacificus PPA02261 N 0.528
PPA06513 Pristionchus pacificus PPA06513 N 0.548
PPA14042 Pristionchus pacificus PPA14042 N 0.489
PPAI002521 Phlebotomus papatasi PPAI002521 N 0.452
PPAI002522 Phlebotomus papatasi PPAI002522 I 0.453
PTRK_0000111400 Parastrongyloides trichosuri PTRK_0000111400 N 0.490
PTRK_0001161700 Parastrongyloides trichosuri PTRK_0001161700 N 0.599
PTRK_0001490800 Parastrongyloides trichosuri PTRK_0001490800 N 0.649
RSKR_0000128800 Rhabditophanes kr3021 RSKR_0000128800 N 0.540
RSKR_0000269200 Rhabditophanes kr3021 RSKR_0000269200 N 0.512
RSKR_0000269500 Rhabditophanes kr3021 RSKR_0000269500 N 0.487
RSKR_0000587700 Rhabditophanes kr3021 RSKR_0000587700 N 0.631
RSKR_0000746900 Rhabditophanes kr3021 RSKR_0000746900 N 0.557
scaffold113-EXSNAP2012.49 Pristionchus exspectatus scaffold113-EXSNAP2012.49 N 0.688
scaffold1425-EXSNAP2012.3 Pristionchus exspectatus scaffold1425-EXSNAP2012.3 N 0.688
scaffold164-EXSNAP2012.19 Pristionchus exspectatus scaffold164-EXSNAP2012.19 N 0.528
scaffold98-EXSNAP2012.51 Pristionchus exspectatus scaffold98-EXSNAP2012.51 N 0.548
SCUD_0000070901 Schistosoma curassoni SCUD_0000070901 N 0.421
SINV22588 Solenopsis invicta SINV22588 N 0.454
Sjc_0035580 Schistosoma japonicum Sjc_0035580 N 0.421
Smp_148930 Schistosoma mansoni Smp_148930 N 0.421
SMTD_0001155301 Schistosoma mattheei SMTD_0001155301 N 0.421
SMUV_0000499601 Syphacia muris SMUV_0000499601 N 0.615
SPAL_0000986100 Strongyloides papillosus SPAL_0000986100 N 0.678
SPAL_0001085700 Strongyloides papillosus SPAL_0001085700 N 0.599
SPAL_0001421900 Strongyloides papillosus SPAL_0001421900 N 0.516
Ssrp Drosophila melanogaster FBgn0010278 N 0.476
Ssrp Drosophila pseudoobscura FBgn0078456 N 0.503
SSTP_0000585600 Strongyloides stercoralis SSTP_0000585600 N 0.599
SSTP_0000790100 Strongyloides stercoralis SSTP_0000790100 N 0.511
SSTP_0001024100 Strongyloides stercoralis SSTP_0001024100 N 0.678
SVE_0294800 Strongyloides venezuelensis SVE_0294800 N 0.678
SVE_0536900 Strongyloides venezuelensis SVE_0536900 N 0.516
SVE_0954900 Strongyloides venezuelensis SVE_0954900 N 0.599
SVUK_0001398701 Strongylus vulgaris SVUK_0001398701 N 0.466
SVUK_0001798101 Strongylus vulgaris SVUK_0001798101 N 0.561
TASK_0000475801 Taenia asiatica TASK_0000475801 N 0.446
TCNE_0000332201 Toxocara canis TCNE_0000332201 N 0.667
TCNE_0000520101 Toxocara canis TCNE_0000520101 N 0.481
TCNE_0001025901 Toxocara canis TCNE_0001025901 N 0.702
TELCIR_02603 Teladorsagia circumcincta TELCIR_02603 N 0.697
TELCIR_05217 Teladorsagia circumcincta TELCIR_05217 N 0.466
TELCIR_22690 Teladorsagia circumcincta TELCIR_22690 N 0.466
tetur02g08250 Tetranychus urticae tetur02g08250 N 0.554
TriadG64155 Trichoplax adhaerens TriadG64155 I 0.440
TsM_000111500 Taenia solium TsM_000111500 N 0.446
TTAC_0000692101 Hydatigera taeniaeformis TTAC_0000692101 N 0.433
WBGene00238628 Onchocerca volvulus WBGene00238628 N 0.625
YQE_02071 Dendroctonus ponderosae YQE_02071 N 0.453