Gorai.001G121700 (Gossypium raimondii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gorai.001G121700 T142987_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.001G121700.1 C2H2 ZF 283 304
Gorai.001G121700.1 C2H2 ZF 303 329

Links

Other C2H2 ZF family TFs
Other Gossypium raimondii TFs

305 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00022p00243980 Amborella trichopoda AMTR_s00022p00243980 N 0.772
AMTR_s00093p00164790 Amborella trichopoda AMTR_s00093p00164790 N 0.758
Aquca_004_00109 Aquilegia coerulea Aquca_004_00109 N 0.797
Aquca_006_00227 Aquilegia coerulea Aquca_006_00227 N 0.797
Aquca_026_00228 Aquilegia coerulea Aquca_026_00228 N 0.758
Aquca_040_00077 Aquilegia coerulea Aquca_040_00077 N 0.797
NTT Arabidopsis lyrata fgenesh2_kg.5__2209__AT3G57670.1 N 0.772
WIP6 Arabidopsis thaliana AT1G13290 N 0.758
WIP2 Arabidopsis thaliana AT3G57670 N 0.772
Bostr.13671s0117 Boechera stricta Bostr.13671s0117 N 0.758
Bostr.20903s0019 Boechera stricta Bostr.20903s0019 N 0.772
BRADI1G36067 Brachypodium distachyon BRADI1G36067 N 0.758
BRADI4G27770 Brachypodium distachyon BRADI4G27770 N 0.761
Bo4g111000 Brassica oleracea Bo4g111000 N 0.772
Bo5g015200 Brassica oleracea Bo5g015200 N 0.758
Bo6g073120 Brassica oleracea Bo6g073120 N 0.772
Bo8g092070 Brassica oleracea Bo8g092070 N 0.772
Bra003295 Brassica rapa Bra003295 N 0.772
Bra007346 Brassica rapa Bra007346 N 0.770
Bra014612 Brassica rapa Bra014612 N 0.772
Bra019822 Brassica rapa Bra019822 N 0.758
PK03705.1 Cannabis sativa PK03705.1 N 0.772
PK05257.1 Cannabis sativa PK05257.1 N 0.797
Cagra.0210s0004 Capsella grandiflora Cagra.0210s0004 N 0.772
Cagra.3501s0170 Capsella grandiflora Cagra.3501s0170 N 0.758
Carubv10012013m.g Capsella rubella Carubv10012013m.g N 0.758
Carubv10017428m.g Capsella rubella Carubv10017428m.g N 0.772
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N 0.827
evm.TU.supercontig_1.215 Carica papaya evm.TU.supercontig_1.215 N 0.758
evm.TU.supercontig_84.74 Carica papaya evm.TU.supercontig_84.74 N 0.772
Ca_07051 Cicer arietinum Ca_07051 N 0.803
Ca_07269 Cicer arietinum Ca_07269 N 0.772
Ca_08435 Cicer arietinum Ca_08435 N 0.758
Ca_16482 Cicer arietinum Ca_16482 N 0.822
Ca_21713 Cicer arietinum Ca_21713 N 0.782
Ca_24699 Cicer arietinum Ca_24699 N 0.758
Cla000184 Citrullus lanatus Cla000184 N 0.808
Cla002714 Citrullus lanatus Cla002714 N 0.758
Cla008187 Citrullus lanatus Cla008187 N 0.772
Cla008675 Citrullus lanatus Cla008675 N
Cla015481 Citrullus lanatus Cla015481 N 0.778
Ciclev10003648m.g Citrus clementina Ciclev10003648m.g N 0.788
Ciclev10005189m.g Citrus clementina Ciclev10005189m.g N 0.772
Ciclev10017716m.g Citrus clementina Ciclev10017716m.g N 0.778
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N 0.827
Ciclev10033535m.g Citrus clementina Ciclev10033535m.g N 0.767
orange1.1g019587m.g Citrus sinensis orange1.1g019587m.g N 0.778
orange1.1g037179m.g Citrus sinensis orange1.1g037179m.g N 0.788
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N 0.827
orange1.1g040794m.g Citrus sinensis orange1.1g040794m.g N 0.772
orange1.1g046329m.g Citrus sinensis orange1.1g046329m.g N 0.767
Cucsa.050260 Cucumis sativus Cucsa.050260 N 0.778
Cucsa.065460 Cucumis sativus Cucsa.065460 N 0.784
Cucsa.199850 Cucumis sativus Cucsa.199850 N 0.808
Cucsa.242970 Cucumis sativus Cucsa.242970 N 0.772
Cucsa.248320 Cucumis sativus Cucsa.248320 N 0.758
Cucsa.357260 Cucumis sativus Cucsa.357260 N 0.772
Eucgr.A02400 Eucalyptus grandis Eucgr.A02400 N 0.772
Eucgr.B03047 Eucalyptus grandis Eucgr.B03047 N 0.758
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N 0.827
Eucgr.J00788 Eucalyptus grandis Eucgr.J00788 N 0.782
Thhalv10006035m.g Eutrema salsugineum Thhalv10006035m.g N 0.772
Thhalv10009489m.g Eutrema salsugineum Thhalv10009489m.g N 0.758
gene03867-v1.0-hybrid Fragaria vesca gene03867-v1.0-hybrid N 0.767
gene14361-v1.0-hybrid Fragaria vesca gene14361-v1.0-hybrid N 0.772
gene20598-v1.0-hybrid Fragaria vesca gene20598-v1.0-hybrid N 0.778
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N 0.821
GLYMA01G22120 Glycine max GLYMA01G22120 N 0.758
GLYMA02G10970 Glycine max GLYMA02G10970 N 0.758
GLYMA02G31270 Glycine max GLYMA02G31270 N 0.772
GLYMA08G16390 Glycine max GLYMA08G16390 N 0.802
GLYMA10G34770 Glycine max GLYMA10G34770 N 0.758
GLYMA11G19060 Glycine max GLYMA11G19060 N 0.827
GLYMA12G09400 Glycine max GLYMA12G09400 N 0.827
GLYMA12G30930 Glycine max GLYMA12G30930 N 0.827
GLYMA12G36660 Glycine max GLYMA12G36660 N 0.802
GLYMA13G27371 Glycine max GLYMA13G27371 N 0.802
GLYMA13G39370 Glycine max GLYMA13G39370 N 0.827
GLYMA15G42870 Glycine max GLYMA15G42870 N 0.802
GLYMA19G32430 Glycine max GLYMA19G32430 N 0.772
GLYMA20G32750 Glycine max GLYMA20G32750 N 0.758
Gorai.002G152600 Gossypium raimondii Gorai.002G152600 N 0.772
Gorai.003G089200 Gossypium raimondii Gorai.003G089200 N 0.772
Gorai.004G037000 Gossypium raimondii Gorai.004G037000 N 0.778
Gorai.004G065400 Gossypium raimondii Gorai.004G065400 N 0.778
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N 0.827
Gorai.006G138700 Gossypium raimondii Gorai.006G138700 N 0.778
Gorai.007G177300 Gossypium raimondii Gorai.007G177300 N 0.778
Gorai.010G039600 Gossypium raimondii Gorai.010G039600 N 0.788
Gorai.013G080100 Gossypium raimondii Gorai.013G080100 N 0.758
Gorai.013G250800 Gossypium raimondii Gorai.013G250800 N 0.782
MLOC_54308 Hordeum vulgare MLOC_54308 N 0.761
MLOC_65351 Hordeum vulgare MLOC_65351 N 0.782
LPERR06G17470 Leersia perrieri LPERR06G17470 N 0.758
LPERR09G03450 Leersia perrieri LPERR09G03450 N 0.761
Lus10004887.g Linum usitatissimum Lus10004887.g N 0.803
Lus10020597.g Linum usitatissimum Lus10020597.g N 0.803
Lus10021700.g Linum usitatissimum Lus10021700.g N 0.758
Lus10029525.g Linum usitatissimum Lus10029525.g N 0.811
Lus10031271.g Linum usitatissimum Lus10031271.g N 0.797
Lus10031838.g Linum usitatissimum Lus10031838.g N 0.797
Lus10035044.g Linum usitatissimum Lus10035044.g N 0.758
Lus10039613.g Linum usitatissimum Lus10039613.g N 0.811
chr1.CM0318.720.nd Lotus japonicus chr1.CM0318.720.nd N 0.772
chr2.CM1731.90.nc Lotus japonicus chr2.CM1731.90.nc N 0.758
chr3.CM1144.10.nc Lotus japonicus chr3.CM1144.10.nc N 0.821
MDP0000131949 Malus domestica MDP0000131949 N 0.827
MDP0000142494 Malus domestica MDP0000142494 N 0.789
MDP0000144266 Malus domestica MDP0000144266 N 0.790
MDP0000300013 Malus domestica MDP0000300013 N 0.827
MDP0000303483 Malus domestica MDP0000303483 N 0.758
MDP0000403797 Malus domestica MDP0000403797 N 0.778
MDP0000573922 Malus domestica MDP0000573922 N 0.786
MDP0000580545 Malus domestica MDP0000580545 N 0.778
MDP0000601705 Malus domestica MDP0000601705 N 0.772
MDP0000899280 Malus domestica MDP0000899280 N 0.758
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N 0.827
cassava16214.m1 Manihot esculenta cassava16214.m1 N 0.821
cassava34009.m1 Manihot esculenta cassava34009.m1 N 0.782
cassava35956.valid.m1 Manihot esculenta cassava35956.valid.m1 N 0.772
cassava39829.m1 Manihot esculenta cassava39829.m1 N 0.802
cassava41737.m1 Manihot esculenta cassava41737.m1 N 0.772
cassava44390.m1 Manihot esculenta cassava44390.m1 N 0.788
cassava46219.m1 Manihot esculenta cassava46219.m1 N 0.758
cassava5227.m1 Manihot esculenta cassava5227.m1 N 0.782
MTR_1g093095 Medicago truncatula MTR_1g093095 N 0.758
mgf019910m Mimulus guttatus mgf019910m N
mgf022319m Mimulus guttatus mgf022319m N 0.778
GSMUA_Achr11G18950_001 Musa acuminata GSMUA_Achr11G18950_001 N
GSMUA_Achr3G03850_001 Musa acuminata GSMUA_Achr3G03850_001 N 0.802
GSMUA_Achr3G11050_001 Musa acuminata GSMUA_Achr3G11050_001 N 0.782
GSMUA_Achr3G11870_001 Musa acuminata GSMUA_Achr3G11870_001 N 0.788
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N 0.811
GSMUA_Achr5G26210_001 Musa acuminata GSMUA_Achr5G26210_001 N
GSMUA_Achr6G01410_001 Musa acuminata GSMUA_Achr6G01410_001 N 0.761
GSMUA_Achr6G03470_001 Musa acuminata GSMUA_Achr6G03470_001 N 0.758
GSMUA_Achr8G25650_001 Musa acuminata GSMUA_Achr8G25650_001 N
GSMUA_Achr9G12600_001 Musa acuminata GSMUA_Achr9G12600_001 N 0.802
GSMUA_AchrUn_randomG20320_001 Musa acuminata GSMUA_AchrUn_randomG20320_001 N 0.772
GSMUA_AchrUn_randomG22660_001 Musa acuminata GSMUA_AchrUn_randomG22660_001 N 0.778
OBART06G20890 Oryza barthii OBART06G20890 N 0.782
OBART09G03640 Oryza barthii OBART09G03640 N
OB06G28740 Oryza brachyantha OB06G28740 N 0.758
ORGLA06G0173600 Oryza glaberrima ORGLA06G0173600 N 0.758
ORGLA09G0176200 Oryza glaberrima ORGLA09G0176200 N
OGLUM06G22000 Oryza glumaepatula OGLUM06G22000 N 0.758
OGLUM09G04400 Oryza glumaepatula OGLUM09G04400 N
OGLUM09G05550 Oryza glumaepatula OGLUM09G05550 N 0.761
BGIOSGA023262 Oryza indica BGIOSGA023262 N 0.758
BGIOSGA030081 Oryza indica BGIOSGA030081 N
BGIOSGA030484 Oryza indica BGIOSGA030484 N 0.761
OMERI09G02890 Oryza meridionalis OMERI09G02890 N
OMERI09G03940 Oryza meridionalis OMERI09G03940 N 0.761
ONIVA02G14580 Oryza nivara ONIVA02G14580 N
ONIVA06G24670 Oryza nivara ONIVA06G24670 N 0.758
ONIVA08G08420 Oryza nivara ONIVA08G08420 N 0.761
OPUNC06G19020 Oryza punctata OPUNC06G19020 N 0.758
OPUNC09G03280 Oryza punctata OPUNC09G03280 N
OPUNC09G04260 Oryza punctata OPUNC09G04260 N 0.761
ORUFI06G22350 Oryza rufipogon ORUFI06G22350 N 0.758
ORUFI09G04060 Oryza rufipogon ORUFI09G04060 N
ORUFI09G05390 Oryza rufipogon ORUFI09G05390 N 0.761
OS06G0612300 Oryza sativa OS06G0612300 N 0.758
OS09G0307400 Oryza sativa OS09G0307400 N 0.761
Pavir.Ba03009 Panicum virgatum Pavir.Ba03009 N 0.761
Pavir.Db00765 Panicum virgatum Pavir.Db00765 N 0.758
e_gw1.203.23.1 Physcomitrella patens e_gw1.203.23.1 N 0.788
gw1.359.34.1 Physcomitrella patens gw1.359.34.1 N 0.788
POPTR_0001s27490 Populus trichocarpa POPTR_0001s27490 N 0.802
POPTR_0002s09840 Populus trichocarpa POPTR_0002s09840 N 0.798
POPTR_0003s20400 Populus trichocarpa POPTR_0003s20400 N 0.788
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N 0.827
POPTR_0009s06700 Populus trichocarpa POPTR_0009s06700 N 0.802
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N 0.827
POPTR_0010s13910 Populus trichocarpa POPTR_0010s13910 N 0.758
POPTR_0016s05310 Populus trichocarpa POPTR_0016s05310 N 0.772
Pm000471 Prunus mume Pm000471 N 0.778
Pm001374 Prunus mume Pm001374 N 0.827
Pm025853 Prunus mume Pm025853 N 0.772
Pm029018 Prunus mume Pm029018 N 0.758
PRUPE_ppa008185mg Prunus persica PRUPE_ppa008185mg N 0.772
PRUPE_ppa020013m2g Prunus persica PRUPE_ppa020013m2g N 0.758
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N 0.827
PRUPE_ppa024429mg Prunus persica PRUPE_ppa024429mg N 0.778
27810.m000651 Ricinus communis 27810.m000651 N 0.772
29908.m006047 Ricinus communis 29908.m006047 N 0.788
30055.m001542 Ricinus communis 30055.m001542 N 0.827
30061.m000294 Ricinus communis 30061.m000294 N 0.802
30169.m006417 Ricinus communis 30169.m006417 N 0.788
SapurV1A.0018s0090 Salix purpurea SapurV1A.0018s0090 N 0.772
SapurV1A.0027s0280 Salix purpurea SapurV1A.0027s0280 N 0.782
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N 0.827
SapurV1A.0219s0040 Salix purpurea SapurV1A.0219s0040 N 0.803
SapurV1A.0445s0120 Salix purpurea SapurV1A.0445s0120 N 0.786
SapurV1A.0445s0140 Salix purpurea SapurV1A.0445s0140 N 0.786
SELMODRAFT_110681 Selaginella moellendorffii SELMODRAFT_110681 N 0.782
SELMODRAFT_128378 Selaginella moellendorffii SELMODRAFT_128378 N 0.782
SELMODRAFT_36986 Selaginella moellendorffii SELMODRAFT_36986 N 0.758
SELMODRAFT_36987 Selaginella moellendorffii SELMODRAFT_36987 N 0.758
SELMODRAFT_57106 Selaginella moellendorffii SELMODRAFT_57106 N 0.758
SELMODRAFT_57114 Selaginella moellendorffii SELMODRAFT_57114 N 0.758
Si006616m.g Setaria italica Si006616m.g N 0.758
Si030360m.g Setaria italica Si030360m.g N 0.761
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N 0.811
Solyc05g009770.1 Solanum lycopersicum Solyc05g009770.1 N
Solyc11g062060.1 Solanum lycopersicum Solyc11g062060.1 N 0.778
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N 0.811
PGSC0003DMG400007112 Solanum tuberosum PGSC0003DMG400007112 N 0.797
PGSC0003DMG400013609 Solanum tuberosum PGSC0003DMG400013609 N 0.778
PGSC0003DMG400030271 Solanum tuberosum PGSC0003DMG400030271 N 0.772
PGSC0003DMG400046144 Solanum tuberosum PGSC0003DMG400046144 N
Sb02g020840 Sorghum bicolor Sb02g020840 N 0.761
Sb10g024040 Sorghum bicolor Sb10g024040 N 0.758
TCM_005892 Theobroma cacao TCM_005892 N 0.802
TCM_011858 Theobroma cacao TCM_011858 N 0.758
TCM_024788 Theobroma cacao TCM_024788 N 0.772
TCM_034881 Theobroma cacao TCM_034881 N 0.788
TCM_040610 Theobroma cacao TCM_040610 N 0.788
TCM_041441 Theobroma cacao TCM_041441 N 0.827
Traes_5BL_46BDE583B Triticum aestivum Traes_5BL_46BDE583B N 0.761
Traes_5DL_98FA0887C Triticum aestivum Traes_5DL_98FA0887C N 0.761
Traes_7AL_1070DBD71 Triticum aestivum Traes_7AL_1070DBD71 N 0.782
TRIUR3_23735 Triticum urartu TRIUR3_23735 N 0.782
TRIUR3_30537 Triticum urartu TRIUR3_30537 N 0.761
DOT5 Vitis vinifera VIT_01s0011g03100 N 0.758
VIT_06s0004g01870 Vitis vinifera VIT_06s0004g01870 N
WIP3 Vitis vinifera VIT_06s0080g00270 N 0.827
NTT Vitis vinifera VIT_08s0007g08070 N 0.772
TT1 Vitis vinifera VIT_18s0001g05860 N 0.788
GRMZM2G061545 Zea mays GRMZM2G061545 N 0.782
GRMZM2G150011 Zea mays GRMZM2G150011 N 0.761
GRMZM2G435357 Zea mays GRMZM2G435357 N 0.758
GRMZM2G436344 Zea mays GRMZM2G436344 N 0.758