H102_05233 (Trichophyton rubrum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 H102_05233 T254437_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.729 0.729
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.729 0.729
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.729 0.729
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EZF40849 MADS box 10 57

Links

Other MADS box family TFs
Other Trichophyton rubrum TFs

229 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_15940 Aegilops tauschii F775_15940 N
F775_28371 Aegilops tauschii F775_28371 N
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N
SCL21 Arabidopsis lyrata scaffold_303269.1 N
PAT1 Arabidopsis lyrata scaffold_801100.1 N
SCL5 Arabidopsis thaliana AT1G50600 N
SCL21 Arabidopsis thaliana AT2G04890 N
PAT1 Arabidopsis thaliana AT5G48150 N
Bostr.19424s0023 Boechera stricta Bostr.19424s0023 N
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N
BRADI1G23350 Brachypodium distachyon BRADI1G23350 N
Bo2g149670 Brassica oleracea Bo2g149670 N
Bo6g022330 Brassica oleracea Bo6g022330 N
Bo7g030310 Brassica oleracea Bo7g030310 N
Bo7g089080 Brassica oleracea Bo7g089080 N
Bo9g009260 Brassica oleracea Bo9g009260 N
Bra018860 Brassica rapa Bra018860 N
Bra020715 Brassica rapa Bra020715 N
Bra036185 Brassica rapa Bra036185 N
Bra037509 Brassica rapa Bra037509 N
PK09018.1 Cannabis sativa PK09018.1 N
PK15082.1 Cannabis sativa PK15082.1 N
Cagra.1158s0007 Capsella grandiflora Cagra.1158s0007 N
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N
Carubv10008830m.g Capsella rubella Carubv10008830m.g N
Carubv10015685m.g Capsella rubella Carubv10015685m.g N
Carubv10026289m.g Capsella rubella Carubv10026289m.g N
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N
Ca_09786 Cicer arietinum Ca_09786 N
Ca_13855 Cicer arietinum Ca_13855 N
Cla001429 Citrullus lanatus Cla001429 N
Cla004565 Citrullus lanatus Cla004565 N
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N
Cucsa.042310 Cucumis sativus Cucsa.042310 N
Cucsa.120390 Cucumis sativus Cucsa.120390 N
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N
Thhalv10002541m.g Eutrema salsugineum Thhalv10002541m.g N
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N
GLYMA02G46730 Glycine max GLYMA02G46730 N
GLYMA02G47640 Glycine max GLYMA02G47640 N
GLYMA14G01020 Glycine max GLYMA14G01020 N
GLYMA14G01960 Glycine max GLYMA14G01960 N
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N
MLOC_65838 Hordeum vulgare MLOC_65838 N
LPERR07G17460 Leersia perrieri LPERR07G17460 N
LPERR10G05390 Leersia perrieri LPERR10G05390 N
Lus10006369.g Linum usitatissimum Lus10006369.g N
Lus10012323.g Linum usitatissimum Lus10012323.g N
Lus10016596.g Linum usitatissimum Lus10016596.g N
MDP0000152670 Malus domestica MDP0000152670 N
MDP0000205236 Malus domestica MDP0000205236 N
MDP0000284679 Malus domestica MDP0000284679 N
MDP0000804652 Malus domestica MDP0000804652 N
cassava10826.m1 Manihot esculenta cassava10826.m1 N
cassava34106.m1 Manihot esculenta cassava34106.m1 N
cassava34699.m1 Manihot esculenta cassava34699.m1 N
cassava8885.m1 Manihot esculenta cassava8885.m1 N
MTR_3g056110 Medicago truncatula MTR_3g056110 N
MTR_5g094450 Medicago truncatula MTR_5g094450 N
MTR_5g097480 Medicago truncatula MTR_5g097480 N
mgf013039m Mimulus guttatus mgf013039m N
OBART07G20130 Oryza barthii OBART07G20130 N
OBART10G07700 Oryza barthii OBART10G07700 N
OB07G25870 Oryza brachyantha OB07G25870 N
OB10G15940 Oryza brachyantha OB10G15940 N
ORGLA07G0258500 Oryza glaberrima ORGLA07G0258500 N
ORGLA10G0063900 Oryza glaberrima ORGLA10G0063900 N
OGLUM07G19910 Oryza glumaepatula OGLUM07G19910 N
OGLUM10G07400 Oryza glumaepatula OGLUM10G07400 N
BGIOSGA026022 Oryza indica BGIOSGA026022 N
BGIOSGA032058 Oryza indica BGIOSGA032058 N
OLONG_015869 Oryza longistaminata OLONG_015869 N
OMERI07G16830 Oryza meridionalis OMERI07G16830 N
OMERI10G05450 Oryza meridionalis OMERI10G05450 N
ONIVA07G18570 Oryza nivara ONIVA07G18570 N
ONIVA10G07150 Oryza nivara ONIVA10G07150 N
OPUNC07G19030 Oryza punctata OPUNC07G19030 N
OPUNC10G06730 Oryza punctata OPUNC10G06730 N
ORUFI07G20980 Oryza rufipogon ORUFI07G20980 N
ORUFI10G08100 Oryza rufipogon ORUFI10G08100 N
CIGR2 Oryza sativa OS07G0583600 N
Pavir.Ba00562 Panicum virgatum Pavir.Ba00562 N
Pavir.Ia02739 Panicum virgatum Pavir.Ia02739 N
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N
SCL5 Populus trichocarpa POPTR_0001s37270 N
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N
Pm012019 Prunus mume Pm012019 N
Pm015021 Prunus mume Pm015021 N
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N
27613.m000642 Ricinus communis 27613.m000642 N
29949.m000124 Ricinus communis 29949.m000124 N
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N
Si029418m.g Setaria italica Si029418m.g N
Si035052m.g Setaria italica Si035052m.g N
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N
Sb02g037650 Sorghum bicolor Sb02g037650 N
TCM_002319 Theobroma cacao TCM_002319 N
TCM_030393 Theobroma cacao TCM_030393 N
TCM_030733 Theobroma cacao TCM_030733 N
Traes_2BS_D007D6598 Triticum aestivum Traes_2BS_D007D6598 N
Traes_2DS_CCA2FCCAD Triticum aestivum Traes_2DS_CCA2FCCAD N
Traes_5BL_A7C4DAE11 Triticum aestivum Traes_5BL_A7C4DAE11 N
Traes_5DL_B89CD8432 Triticum aestivum Traes_5DL_B89CD8432 N
SCL13 Vitis vinifera VIT_00s0463g00020 N
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N
SCL5 Vitis vinifera VIT_19s0090g01740 N
GRMZM2G431309 Zea mays GRMZM2G431309 N