POPTR_0015s03140 (Populus trichocarpa)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 POPTR_0015s03140 T344303_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK19717.1
M01318_2.00 		Cannabis sativa
GGGSCCCMC
GKGGGSCCC		 PBM
Lambert et al.(2019)
pTH10142 		0.854 0.409
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.832 0.370
TCP1
M07276_2.00 		Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH
DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY		 Dap-seq
OMalley et al.(2016)
TCP1_col_a 		0.832 0.403
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0015s03140.1 TCP 126 279

Links

Other TCP family TFs
Other Populus trichocarpa TFs

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000007556 Ailuropoda melanoleuca ENSAMEG00000007556 N
Alligator_sinensis_CCG011037.1 Alligator sinensis Alligator_sinensis_CCG011037.1 N
ZBTB8A Anolis carolinensis ENSACAG00000004819 N
Afo_R013969 Aptenodytes forsteri Afo_R013969 N
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.833
TCP1 Arabidopsis thaliana AT1G67260 D 0.832
BRC1 Arabidopsis thaliana AT3G18550 I 0.835
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.843
ENSBTAP00000024222-D1 Bos grunniens ENSBTAP00000024222-D1 N
ZBTB8A Bos taurus ENSBTAG00000018199 N
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.831
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.852
Bo1g117490 Brassica oleracea Bo1g117490 I 0.832
Bo2g055640 Brassica oleracea Bo2g055640 I 0.839
Bo2g061250 Brassica oleracea Bo2g061250 I 0.844
Bo3g071560 Brassica oleracea Bo3g071560 I 0.831
Bo5g117410 Brassica oleracea Bo5g117410 N 0.841
Bo6g099040 Brassica oleracea Bo6g099040 I 0.822
Bo6g103670 Brassica oleracea Bo6g103670 I 0.831
Bra001710 Brassica rapa Bra001710 I 0.835
Bra004212 Brassica rapa Bra004212 I 0.833
Bra034010 Brassica rapa Bra034010 I 0.845
Bra037579 Brassica rapa Bra037579 I 0.832
Bra038350 Brassica rapa Bra038350 I 0.844
Brh_R002265 Buceros rhinoceros Brh_R002265 N
ZBTB8A Callithrix jacchus ENSCJAG00000001003 N
Aan_R015482 Calypte anna Aan_R015482 N
ZBTB8A Canis familiaris ENSCAFG00000023779 N
PK12240.1 Cannabis sativa PK12240.1 D 0.832
PK16683.1 Cannabis sativa PK16683.1 N 0.822
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.840
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.853
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.852
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.852
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.853
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.848
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.833
ENSCPOG00000020832 Cavia porcellus ENSCPOG00000020832 N
ENSCSAG00000001058 Chlorocebus sabaeus ENSCSAG00000001058 N
ZBTB8A Choloepus hoffmanni ENSCHOG00000004051 N
Cla007227 Citrullus lanatus Cla007227 I 0.826
Cla016709 Citrullus lanatus Cla016709 I 0.848
Cla018797 Citrullus lanatus Cla018797 N 0.828
Cucsa.113660 Cucumis sativus Cucsa.113660 N 0.824
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.839
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.827
ZBTB8A Dasypus novemcinctus ENSDNOG00000032935 N
Zbtb8a Dipodomys ordii ENSDORG00000007027 N
ZBTB8A Equus caballus ENSECAG00000023392 N
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I 0.851
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.833
ENSFALG00000000603 Ficedula albicollis ENSFALG00000000603 N
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.852
ENSGALG00000003420 Gallus gallus ENSGALG00000003420 N
Gfo_R011646 Geospiza fortis Gfo_R011646 N
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.837
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.834
GLYMA13G07475 Glycine max GLYMA13G07475 I 0.823
GLYMA19G05921 Glycine max GLYMA19G05921 I 0.823
ZBTB8A Homo sapiens ENSG00000160062 N
MLOC_4614 Hordeum vulgare MLOC_4614 I 0.850
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.837
ENSSTOG00000024103 Ictidomys tridecemlineatus ENSSTOG00000024103 N
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.839
Lus10032465.g Linum usitatissimum Lus10032465.g N 0.850
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.842
chr1.LjB10L14.10.nc Lotus japonicus chr1.LjB10L14.10.nc I 0.826
ZBTB8A Loxodonta africana ENSLAFG00000031979 N
ENSP00000362609 Macaca fascicularis ENSP00000362609 N
ENSMEUG00000013710 Macropus eugenii ENSMEUG00000013710 N
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.850
ZBTB8A Meleagris gallopavo ENSMGAG00000004949 N
mgf022233m Mimulus guttatus mgf022233m I 0.835
ZBTB8A Monodelphis domestica ENSMODG00000017424 N
GSMUA_Achr2G21050_001 Musa acuminata GSMUA_Achr2G21050_001 I 0.834
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I 0.827
ENSMPUG00000015223 Mustela putorius furo ENSMPUG00000015223 N
Zbtb8a Mus musculus ENSMUSG00000028807 N
Myotis_brandtii_ZBTB8A_10012393 Myotis brandtii Myotis_brandtii_ZBTB8A_10012393 N
ZBTB8A Myotis lucifugus ENSMLUG00000023002 N
ENSNLEG00000002769 Nomascus leucogenys ENSNLEG00000002769 N
ZBTB8A Ochotona princeps ENSOPRG00000018275 N
Ogr05994 Ophisaurus gracilis Ogr05994 N
ZBTB8A Ornithorhynchus anatinus ENSOANG00000001191 N
ZBTB8A Oryctolagus cuniculus ENSOCUG00000021621 N
OBART08G15630 Oryza barthii OBART08G15630 N 0.844
OBART09G10040 Oryza barthii OBART09G10040 I 0.850
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.850
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.850
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.844
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.850
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.845
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.850
OS09G0410500 Oryza sativa OS09G0410500 I 0.850
ZBTB8A Otolemur garnettii ENSOGAG00000028328 N
ENSOARG00000020930 Ovis aries ENSOARG00000020930 N
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.839
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.845
ZBTB8A Pan troglodytes ENSPTRG00000034505 N
ENSPANG00000019096 Papio anubis ENSPANG00000019096 N
ENSPSIG00000008472 Pelodiscus sinensis ENSPSIG00000008472 N
Pvit_17720 Pogona vitticeps Pvit_17720 N
ENSPPYG00000001590 Pongo abelii ENSPPYG00000001590 N
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.824
ZBTB8A Procavia capensis ENSPCAG00000013857 N
ZBTB8A Pteropus vampyrus ENSPVAG00000010978 N
Zbtb8a Rattus norvegicus ENSRNOG00000008300 N
30167.m000856 Ricinus communis 30167.m000856 I 0.848
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.838
ENSSHAG00000010423 Sarcophilus harrisii ENSSHAG00000010423 N
Si033183m.g Setaria italica Si033183m.g I 0.841
Solyc05g009900.1 Solanum lycopersicum Solyc05g009900.1 I 0.844
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.839
ZBTB8A Sus scrofa ENSSSCG00000021457 N
ZBTB8A Taeniopygia guttata ENSTGUG00000001373 N
ENSTSYG00000009437 Tarsius syrichta ENSTSYG00000009437 N
ZBTB8A Tursiops truncatus ENSTTRG00000014967 N
Tal_R009236 Tyto alba Tal_R009236 N
ZBTB8A Vicugna pacos ENSVPAG00000011873 N
TCP1 Vitis vinifera VIT_14s0083g00150 I 0.839
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.840
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.841