RGA (Arabidopsis thaliana)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 AT2G01570 T199823_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AT2G01570.1 GRAS 221 581

Links

Other GRAS family TFs
Other Arabidopsis thaliana TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.978
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.975
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N 0.972
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N 0.955
Bra024875 Brassica rapa Bra024875 N 0.944
Bo7g078550 Brassica oleracea Bo7g078550 N 0.941
Carubv10018534m.g Capsella rubella Carubv10018534m.g N 0.933
GAI Arabidopsis thaliana AT1G14920 N 0.869
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.869
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.869
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.866
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.866
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.863
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.855
29692.m000540 Ricinus communis 29692.m000540 N 0.852
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.852
TCM_010965 Theobroma cacao TCM_010965 N 0.849
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.835
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.835
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.835
Bo9g070200 Brassica oleracea Bo9g070200 N 0.835
PK14700.1 Cannabis sativa PK14700.1 N 0.835
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.832
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.830
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.830
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.830
Bra017443 Brassica rapa Bra017443 N 0.830
Cla003996 Citrullus lanatus Cla003996 N 0.829
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.824
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.818
Pm006304 Prunus mume Pm006304 N 0.812
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.807
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.802
MDP0000237978 Malus domestica MDP0000237978 N 0.796
Ca_05046 Cicer arietinum Ca_05046 N 0.790
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.788
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N 0.782
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N 0.780
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.771
mgf008289m Mimulus guttatus mgf008289m N 0.768
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.767
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.765
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.763
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.763
MDP0000669451 Malus domestica MDP0000669451 I 0.757
Pm014329 Prunus mume Pm014329 I 0.757
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.757
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.757
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.754
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.753
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.749
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.746
28677.m000055 Ricinus communis 28677.m000055 N 0.746
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.743
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.739
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.738
Cla020062 Citrullus lanatus Cla020062 N 0.737
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.737
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.737
Cucsa.006260 Cucumis sativus Cucsa.006260 N 0.737
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.735
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.735
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.731
Ca_13295 Cicer arietinum Ca_13295 I 0.729
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.729
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.718
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.715
mgf025772m Mimulus guttatus mgf025772m N 0.712
TCM_019165 Theobroma cacao TCM_019165 N 0.710