GLYMA18G04500 (Glycine max)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 GLYMA18G04500 T200247_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RGL2
M02031_2.00
Arabidopsis thaliana
NGTACGGHN

NDCCGTACN
PBM
Weirauch et al.(2014)
pTH8681
0.722 0.722
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA18G04500.1 GRAS 209 573

Links

Other GRAS family TFs
Other Glycine max TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.961
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.877
MDP0000669451 Malus domestica MDP0000669451 I 0.872
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.872
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.872
Ca_13295 Cicer arietinum Ca_13295 I 0.864
Pm014329 Prunus mume Pm014329 I 0.863
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.860
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.850
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.848
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.847
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.833
28677.m000055 Ricinus communis 28677.m000055 N 0.819
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.819
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.817
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.817
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.817
TCM_019165 Theobroma cacao TCM_019165 N 0.813
Lus10009133.g Linum usitatissimum Lus10009133.g N 0.811
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.810
Cla020062 Citrullus lanatus Cla020062 N 0.808
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.808
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.804
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.801
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.800
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.800
TCM_010965 Theobroma cacao TCM_010965 N 0.796
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.792
Cucsa.006260 Cucumis sativus Cucsa.006260 N 0.792
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.792
29692.m000540 Ricinus communis 29692.m000540 N 0.787
PK14700.1 Cannabis sativa PK14700.1 N 0.782
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.779
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.779
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.776
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.773
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.770
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.770
Cla003996 Citrullus lanatus Cla003996 N 0.770
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.767
Ca_05046 Cicer arietinum Ca_05046 N 0.766
Pm006304 Prunus mume Pm006304 N 0.762
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.762
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.756
RGL2 Arabidopsis lyrata fgenesh2_kg.3__292__AT3G03450.1 I 0.753
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.751
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.751
mgf008289m Mimulus guttatus mgf008289m N 0.750
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.749
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.749
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N 0.747
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.746
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N 0.746
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N 0.744
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.743
RGA Arabidopsis thaliana AT2G01570 N 0.743
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.742
F775_03572 Aegilops tauschii F775_03572 N 0.741
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.741
Bo7g078550 Brassica oleracea Bo7g078550 N 0.740
Bra024875 Brassica rapa Bra024875 N 0.740
GAI Arabidopsis thaliana AT1G14920 N 0.740
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N 0.740
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.737
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.737
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.736
Cagra.2098s0043 Capsella grandiflora Cagra.2098s0043 I 0.735
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.734
Carubv10015212m.g Capsella rubella Carubv10015212m.g I 0.733
MDP0000237978 Malus domestica MDP0000237978 N 0.728
Bostr.19046s0061 Boechera stricta Bostr.19046s0061 I 0.727
RGL1 Arabidopsis lyrata fgenesh2_kg.2__868__AT1G66350.1 N 0.724
Thhalv10018436m.g Eutrema salsugineum Thhalv10018436m.g N 0.724
Cagra.0463s0002 Capsella grandiflora Cagra.0463s0002 N 0.724
Carubv10018534m.g Capsella rubella Carubv10018534m.g N 0.722
Pavir.Ia00840 Panicum virgatum Pavir.Ia00840 N 0.722
RGL1 Arabidopsis thaliana AT1G66350 N 0.722
Carubv10020171m.g Capsella rubella Carubv10020171m.g N 0.721
Thhalv10020431m.g Eutrema salsugineum Thhalv10020431m.g I 0.719
Thhalv10015535m.g Eutrema salsugineum Thhalv10015535m.g I 0.718
Bo2g052880 Brassica oleracea Bo2g052880 N 0.718
Si039400m.g Setaria italica Si039400m.g N 0.716
Pavir.Ib04357 Panicum virgatum Pavir.Ib04357 N 0.716
Aquca_002_01300 Aquilegia coerulea Aquca_002_01300 N 0.714
Sb01g010660 Sorghum bicolor Sb01g010660 N 0.714
Traes_4AL_77F4CC833 Triticum aestivum Traes_4AL_77F4CC833 N 0.714
GRMZM2G144744 Zea mays GRMZM2G144744 N 0.714
GRMZM2G024973 Zea mays GRMZM2G024973 N 0.714
RGL2 Arabidopsis thaliana AT3G03450 D 0.714
Bostr.26959s0284 Boechera stricta Bostr.26959s0284 N 0.712
ORGLA03G0290200 Oryza glaberrima ORGLA03G0290200 N 0.710
SLR1 Oryza indica BGIOSGA013420 N 0.710
OMERI03G27970 Oryza meridionalis OMERI03G27970 N 0.710
OBART03G31370 Oryza barthii OBART03G31370 N 0.710
OB03G38380 Oryza brachyantha OB03G38380 N 0.710
OGLUM03G31610 Oryza glumaepatula OGLUM03G31610 N 0.710
ORUFI03G32650 Oryza rufipogon ORUFI03G32650 N 0.710
OPUNC03G28530 Oryza punctata OPUNC03G28530 N 0.710
ONIVA03G32670 Oryza nivara ONIVA03G32670 N 0.710
SLR1 Oryza sativa OS03G0707600 N 0.710
BRADI1G11090 Brachypodium distachyon BRADI1G11090 N 0.708
MLOC_67940 Hordeum vulgare MLOC_67940 N 0.706
Bra039762 Brassica rapa Bra039762 N 0.706
Traes_4BS_2EE4988CD Triticum aestivum Traes_4BS_2EE4988CD N 0.706
LPERR03G26000 Leersia perrieri LPERR03G26000 N 0.704
Bo5g149920 Brassica oleracea Bo5g149920 I 0.704
mgf025772m Mimulus guttatus mgf025772m N 0.703
Traes_4DS_ADBA6E30A Triticum aestivum Traes_4DS_ADBA6E30A N 0.703