Cucsa.006260 (Cucumis sativus)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Cucsa.006260 T202114_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.006260.1 GRAS 230 596

Links

Other GRAS family TFs
Other Cucumis sativus TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla020062 Citrullus lanatus Cla020062 N 0.953
Pm014329 Prunus mume Pm014329 I 0.821
MDP0000669451 Malus domestica MDP0000669451 I 0.818
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.816
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.814
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.795
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.792
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.792
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.790
Lus10009133.g Linum usitatissimum Lus10009133.g N 0.789
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.789
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.789
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.787
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.786
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.786
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.786
TCM_019165 Theobroma cacao TCM_019165 N 0.784
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.784
PK14700.1 Cannabis sativa PK14700.1 N 0.779
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.778
28677.m000055 Ricinus communis 28677.m000055 N 0.778
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.773
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.772
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.770
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.768
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.768
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.768
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.767
Ca_13295 Cicer arietinum Ca_13295 I 0.767
29692.m000540 Ricinus communis 29692.m000540 N 0.765
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.762
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.760
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.759
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.759
TCM_010965 Theobroma cacao TCM_010965 N 0.756
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.756
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.756
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.751
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.748
Pm006304 Prunus mume Pm006304 N 0.748
Ca_05046 Cicer arietinum Ca_05046 N 0.746
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.745
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.745
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.745
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N 0.743
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.743
Cla003996 Citrullus lanatus Cla003996 N 0.742
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N 0.740
Bo7g078550 Brassica oleracea Bo7g078550 N 0.740
Bra024875 Brassica rapa Bra024875 N 0.740
RGA Arabidopsis thaliana AT2G01570 N 0.737
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.734
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.734
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.734
GAI Arabidopsis thaliana AT1G14920 N 0.734
GRMZM2G144744 Zea mays GRMZM2G144744 N 0.733
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.732
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.731
MDP0000237978 Malus domestica MDP0000237978 N 0.731
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.730
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.729
Thhalv10018436m.g Eutrema salsugineum Thhalv10018436m.g N 0.724
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.724
Carubv10018534m.g Capsella rubella Carubv10018534m.g N 0.722
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.720
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.715
mgf008289m Mimulus guttatus mgf008289m N 0.711
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N 0.708
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N 0.705
RGL2 Arabidopsis lyrata fgenesh2_kg.3__292__AT3G03450.1 I 0.704