orange1.1g043131m.g (Citrus sinensis)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 orange1.1g043131m.g T202953_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g043131m GRAS 226 587

Links

Other GRAS family TFs
Other Citrus sinensis TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N 0.989
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.844
29692.m000540 Ricinus communis 29692.m000540 N 0.835
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.819
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.818
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.818
PK14700.1 Cannabis sativa PK14700.1 N 0.812
TCM_010965 Theobroma cacao TCM_010965 N 0.812
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.810
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.810
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.807
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.804
Cla003996 Citrullus lanatus Cla003996 N 0.804
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.801
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.793
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N 0.790
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N 0.790
Pm006304 Prunus mume Pm006304 N 0.790
Bra024875 Brassica rapa Bra024875 N 0.788
Bo7g078550 Brassica oleracea Bo7g078550 N 0.788
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.786
Ca_05046 Cicer arietinum Ca_05046 N 0.785
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.784
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.782
RGA Arabidopsis thaliana AT2G01570 N 0.782
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.779
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.774
Carubv10018534m.g Capsella rubella Carubv10018534m.g N 0.773
MDP0000237978 Malus domestica MDP0000237978 N 0.773
GAI Arabidopsis thaliana AT1G14920 N 0.773
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.770
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.770
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.765
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.765
MDP0000669451 Malus domestica MDP0000669451 I 0.763
mgf008289m Mimulus guttatus mgf008289m N 0.761
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.761
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.755
Pm014329 Prunus mume Pm014329 I 0.751
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.750
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.750
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.748
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.748
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.747
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.747
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.746
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.746
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.744
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.742
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.736
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.736
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.734
GRMZM2G144744 Zea mays GRMZM2G144744 N 0.733
28677.m000055 Ricinus communis 28677.m000055 N 0.733
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.733
TCM_019165 Theobroma cacao TCM_019165 N 0.731
Cla020062 Citrullus lanatus Cla020062 N 0.730
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.730
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.729
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.725
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.723
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.721
Lus10009133.g Linum usitatissimum Lus10009133.g N 0.720
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.716
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.716
Cucsa.006260 Cucumis sativus Cucsa.006260 N 0.708
Ca_13295 Cicer arietinum Ca_13295 I 0.703
Bo9g070200 Brassica oleracea Bo9g070200 N 0.701
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.701