Cla020062 (Citrullus lanatus)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Cla020062 T201940_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla020062 GRAS 229 595

Links

Other GRAS family TFs
Other Citrullus lanatus TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.006260 Cucumis sativus Cucsa.006260 N 0.953
Pm014329 Prunus mume Pm014329 I 0.838
MDP0000669451 Malus domestica MDP0000669451 I 0.830
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.827
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.825
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.820
Lus10009133.g Linum usitatissimum Lus10009133.g N 0.811
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.809
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.808
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.808
TCM_019165 Theobroma cacao TCM_019165 N 0.807
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.806
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.806
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.803
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.803
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.799
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.799
28677.m000055 Ricinus communis 28677.m000055 N 0.797
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.795
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.793
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.789
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.789
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.789
PK14700.1 Cannabis sativa PK14700.1 N 0.787
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.785
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.785
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.784
29692.m000540 Ricinus communis 29692.m000540 N 0.782
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.781
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.779
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.776
Ca_13295 Cicer arietinum Ca_13295 I 0.775
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.772
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.770
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.768
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.765
TCM_010965 Theobroma cacao TCM_010965 N 0.765
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.765
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.764
Pm006304 Prunus mume Pm006304 N 0.762
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.762
Cla003996 Citrullus lanatus Cla003996 N 0.759
Ca_05046 Cicer arietinum Ca_05046 N 0.757
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.756
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.756
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.749
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.745
MDP0000237978 Malus domestica MDP0000237978 N 0.745
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.743
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N 0.743
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.742
GAI Arabidopsis thaliana AT1G14920 N 0.742
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.742
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.740
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N 0.740
Bo7g078550 Brassica oleracea Bo7g078550 N 0.740
Bra024875 Brassica rapa Bra024875 N 0.740
RGA Arabidopsis thaliana AT2G01570 N 0.737
GRMZM2G144744 Zea mays GRMZM2G144744 N 0.733
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.732
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.732
mgf008289m Mimulus guttatus mgf008289m N 0.731
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N 0.730
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.729
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.727
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N 0.727
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.723
F775_03572 Aegilops tauschii F775_03572 N 0.722
Carubv10018534m.g Capsella rubella Carubv10018534m.g N 0.722
Thhalv10018436m.g Eutrema salsugineum Thhalv10018436m.g N 0.721
RGL2 Arabidopsis lyrata fgenesh2_kg.3__292__AT3G03450.1 I 0.717
Bo2g052880 Brassica oleracea Bo2g052880 N 0.715