GLYMA08G03820 (Glycine max)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 GLYMA08G03820 T254135_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL91
M10922_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G66656_01 		0.750 0.750
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA08G03820.1 MADS box 10 57

Links

Other MADS box family TFs
Other Glycine max TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA08G03830 Glycine max GLYMA08G03830 I 0.958
GLYMA05G35811 Glycine max GLYMA05G35811 I 0.958
MTR_1g054265 Medicago truncatula MTR_1g054265 I 0.896
Ca_05023 Cicer arietinum Ca_05023 I 0.875
MTR_1g063160 Medicago truncatula MTR_1g063160 I 0.854
GLYMA05G35820 Glycine max GLYMA05G35820 I 0.854
MTR_8g079502 Medicago truncatula MTR_8g079502 I 0.854
MTR_1g047550 Medicago truncatula MTR_1g047550 I 0.854
MTR_4g131030 Medicago truncatula MTR_4g131030 I 0.833
LjSGA_017605.1 Lotus japonicus LjSGA_017605.1 I 0.812
Ca_24185 Cicer arietinum Ca_24185 I 0.812
GLYMA08G38880 Glycine max GLYMA08G38880 I 0.812
GLYMA18G20830 Glycine max GLYMA18G20830 I 0.812
chr3.CM0059.60.nd Lotus japonicus chr3.CM0059.60.nd N 0.792
evm.TU.supercontig_25.93 Carica papaya evm.TU.supercontig_25.93 I 0.792
chr4.LjT16L01.50.nd Lotus japonicus chr4.LjT16L01.50.nd I 0.792
MTR_8g051580 Medicago truncatula MTR_8g051580 I 0.771
Carubv10014761m.g Capsella rubella Carubv10014761m.g I 0.771
Cagra.0133s0015 Capsella grandiflora Cagra.0133s0015 I 0.771
Thhalv10022154m.g Eutrema salsugineum Thhalv10022154m.g I 0.750
AGL91 Arabidopsis thaliana AT3G66656 D 0.750
TCM_029518 Theobroma cacao TCM_029518 I 0.750
GLYMA08G03793 Glycine max GLYMA08G03793 N 0.750
AGL91 Arabidopsis lyrata fgenesh2_kg.3__679__AT3G66656.1 I 0.750
PRUPE_ppa024816mg Prunus persica PRUPE_ppa024816mg I 0.729
MDP0000274606 Malus domestica MDP0000274606 N 0.729
Gorai.010G165500 Gossypium raimondii Gorai.010G165500 I 0.729
Bostr.22252s0371 Boechera stricta Bostr.22252s0371 I 0.729
Pm030655 Prunus mume Pm030655 I 0.708
Ciclev10017472m.g Citrus clementina Ciclev10017472m.g I 0.708
orange1.1g037442m.g Citrus sinensis orange1.1g037442m.g I 0.708
MDP0000120467 Malus domestica MDP0000120467 N 0.708
gene30567-v1.0-hybrid Fragaria vesca gene30567-v1.0-hybrid I 0.708
Traes_7BS_4D5DE99CC Triticum aestivum Traes_7BS_4D5DE99CC I 0.700