CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AGL91
(
Arabidopsis lyrata
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
fgenesh2_kg.3__679__AT3G66656.1
T254025_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AGL91
M10922_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT3G66656_01
1.000
1.000
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.3__679__AT3G66656.1
MADS box
3
50
KVQDTNTKQVTFSKRRLGLFKKASELATLCNAEVGIVVFSPGNKPYSF
Links
Other
MADS box
family TFs
Other
Arabidopsis lyrata
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGL91
Arabidopsis thaliana
AT3G66656
D
1.000
Thhalv10022154m.g
Eutrema salsugineum
Thhalv10022154m.g
I
1.000
Bostr.22252s0371
Boechera stricta
Bostr.22252s0371
I
0.979
Carubv10014761m.g
Capsella rubella
Carubv10014761m.g
I
0.979
Cagra.0133s0015
Capsella grandiflora
Cagra.0133s0015
I
0.979
Bra001209
Brassica rapa
Bra001209
I
0.917
Bo3g060720
Brassica oleracea
Bo3g060720
I
0.896
Bra021910
Brassica rapa
Bra021910
I
0.854
Thhalv10017825m.g
Eutrema salsugineum
Thhalv10017825m.g
I
0.854
Bo4g182590
Brassica oleracea
Bo4g182590
I
0.854
Bostr.23794s0666
Boechera stricta
Bostr.23794s0666
I
0.833
AGL29
Arabidopsis lyrata
fgenesh2_kg.4__1464__AT2G34440.1
I
0.833
AGL29
Arabidopsis thaliana
AT2G34440
I
0.833
Carubv10025656m.g
Capsella rubella
Carubv10025656m.g
I
0.833
Cagra.7352s0007
Capsella grandiflora
Cagra.7352s0007
I
0.833
Ca_24185
Cicer arietinum
Ca_24185
I
0.812
Ca_05023
Cicer arietinum
Ca_05023
I
0.792
GLYMA08G03830
Glycine max
GLYMA08G03830
I
0.792
GLYMA05G35811
Glycine max
GLYMA05G35811
I
0.792
gene14058-v1.0-hybrid
Fragaria vesca
gene14058-v1.0-hybrid
I
0.771
LjSGA_017605.1
Lotus japonicus
LjSGA_017605.1
I
0.771
gene30567-v1.0-hybrid
Fragaria vesca
gene30567-v1.0-hybrid
I
0.750
Gorai.010G165500
Gossypium raimondii
Gorai.010G165500
I
0.750
MTR_1g047550
Medicago truncatula
MTR_1g047550
I
0.750
chr4.LjT16L01.50.nd
Lotus japonicus
chr4.LjT16L01.50.nd
I
0.750
GLYMA08G03820
Glycine max
GLYMA08G03820
I
0.750
MTR_8g079502
Medicago truncatula
MTR_8g079502
I
0.750
MTR_1g054265
Medicago truncatula
MTR_1g054265
I
0.750
MTR_8g051580
Medicago truncatula
MTR_8g051580
I
0.750
29693.m002039
Ricinus communis
29693.m002039
I
0.729
MTR_1g063160
Medicago truncatula
MTR_1g063160
I
0.729
TCM_029518
Theobroma cacao
TCM_029518
I
0.729
orange1.1g037442m.g
Citrus sinensis
orange1.1g037442m.g
I
0.729
evm.TU.supercontig_25.93
Carica papaya
evm.TU.supercontig_25.93
I
0.729
GLYMA05G35820
Glycine max
GLYMA05G35820
I
0.729
Ciclev10017472m.g
Citrus clementina
Ciclev10017472m.g
I
0.729
MTR_4g131030
Medicago truncatula
MTR_4g131030
I
0.729
GLYMA18G20830
Glycine max
GLYMA18G20830
I
0.729
Thhalv10012100m.g
Eutrema salsugineum
Thhalv10012100m.g
I
0.711
PDK_20s1551551g001
Phoenix dactylifera
PDK_20s1551551g001
I
0.708
AGL62
Arabidopsis thaliana
AT5G60440
I
0.708
PRUPE_ppa024816mg
Prunus persica
PRUPE_ppa024816mg
I
0.708
gene01788-v1.0-hybrid
Fragaria vesca
gene01788-v1.0-hybrid
I
0.708
cassava10519.m1
Manihot esculenta
cassava10519.m1
I
0.708
Pm030655
Prunus mume
Pm030655
I
0.708
GLYMA08G38880
Glycine max
GLYMA08G38880
I
0.708
scaffold_302326.1
Arabidopsis lyrata
scaffold_302326.1
I
0.708
MDP0000434703
Malus domestica
MDP0000434703
I
0.708