GLYMA18G20830 (Glycine max)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 GLYMA18G20830 T254234_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL91
M10922_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G66656_01 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA18G20830.1 MADS box 10 57

Links

Other MADS box family TFs
Other Glycine max TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_4g131030 Medicago truncatula MTR_4g131030 I 0.938
GLYMA05G35820 Glycine max GLYMA05G35820 I 0.938
GLYMA08G38880 Glycine max GLYMA08G38880 I 0.938
Ca_05023 Cicer arietinum Ca_05023 I 0.917
GLYMA08G03793 Glycine max GLYMA08G03793 N 0.917
MTR_1g054265 Medicago truncatula MTR_1g054265 I 0.896
chr4.LjT16L01.50.nd Lotus japonicus chr4.LjT16L01.50.nd I 0.896
MTR_1g047550 Medicago truncatula MTR_1g047550 I 0.875
MTR_8g079502 Medicago truncatula MTR_8g079502 I 0.875
Ca_24185 Cicer arietinum Ca_24185 I 0.875
MTR_1g063160 Medicago truncatula MTR_1g063160 I 0.875
LjSGA_017605.1 Lotus japonicus LjSGA_017605.1 I 0.875
GLYMA08G03830 Glycine max GLYMA08G03830 I 0.854
chr3.CM0059.60.nd Lotus japonicus chr3.CM0059.60.nd N 0.854
GLYMA05G35811 Glycine max GLYMA05G35811 I 0.854
MTR_8g051580 Medicago truncatula MTR_8g051580 I 0.854
GLYMA08G03820 Glycine max GLYMA08G03820 I 0.812
MTR_8g046350 Medicago truncatula MTR_8g046350 N 0.792
Eucgr.D00311 Eucalyptus grandis Eucgr.D00311 N 0.771
evm.TU.supercontig_25.93 Carica papaya evm.TU.supercontig_25.93 I 0.771
Eucgr.D00312 Eucalyptus grandis Eucgr.D00312 N 0.771
Eucgr.D00313 Eucalyptus grandis Eucgr.D00313 N 0.771
POPTR_0004s13600 Populus trichocarpa POPTR_0004s13600 N 0.771
Bostr.22252s0371 Boechera stricta Bostr.22252s0371 I 0.750
Ciclev10017472m.g Citrus clementina Ciclev10017472m.g I 0.750
SapurV1A.0560s0040 Salix purpurea SapurV1A.0560s0040 N 0.750
SapurV1A.2238s0010 Salix purpurea SapurV1A.2238s0010 N 0.750
orange1.1g037442m.g Citrus sinensis orange1.1g037442m.g I 0.750
MDP0000274606 Malus domestica MDP0000274606 N 0.750
29693.m002039 Ricinus communis 29693.m002039 I 0.750
cassava10519.m1 Manihot esculenta cassava10519.m1 I 0.750
TCM_029518 Theobroma cacao TCM_029518 I 0.750
gene30567-v1.0-hybrid Fragaria vesca gene30567-v1.0-hybrid I 0.729
Thhalv10017825m.g Eutrema salsugineum Thhalv10017825m.g I 0.729
Gorai.010G165500 Gossypium raimondii Gorai.010G165500 I 0.729
Lus10040832.g Linum usitatissimum Lus10040832.g N 0.729
PRUPE_ppa024816mg Prunus persica PRUPE_ppa024816mg I 0.729
MDP0000120467 Malus domestica MDP0000120467 N 0.729
Cla019897 Citrullus lanatus Cla019897 N 0.729
Pm030655 Prunus mume Pm030655 I 0.729
AGL91 Arabidopsis thaliana AT3G66656 D 0.729
Cagra.0133s0015 Capsella grandiflora Cagra.0133s0015 I 0.729
Carubv10014761m.g Capsella rubella Carubv10014761m.g I 0.729
Bo4g182590 Brassica oleracea Bo4g182590 I 0.729
Thhalv10022154m.g Eutrema salsugineum Thhalv10022154m.g I 0.729
Bra021910 Brassica rapa Bra021910 I 0.729
AGL91 Arabidopsis lyrata fgenesh2_kg.3__679__AT3G66656.1 I 0.729
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.708
Carubv10025656m.g Capsella rubella Carubv10025656m.g I 0.708
Cagra.7352s0007 Capsella grandiflora Cagra.7352s0007 I 0.708
Cucsa.212320 Cucumis sativus Cucsa.212320 N 0.708
AGL29 Arabidopsis thaliana AT2G34440 I 0.708
Bostr.23794s0666 Boechera stricta Bostr.23794s0666 I 0.708
AGL29 Arabidopsis lyrata fgenesh2_kg.4__1464__AT2G34440.1 I 0.708