GSMUA_Achr5G01230_001 (Musa acuminata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 GSMUA_Achr5G01230_001 T254384_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MADS2
M10966_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS2_02 		0.792 0.792
FBP1_PETHY
M10996_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP1_01 		0.771 0.771
Q9AVU7_MALDO
M11027_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PI_01 		0.771 0.771
M17_MAIZE
M10959_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$M17_01 		0.750 0.750
Q9AR49_MAIZE
M10980_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$M29_01 		0.750 0.750
MADS2_PETHY
M10998_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS2_01 		0.750 0.750
Q9FVN1_MAIZE
M10982_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS2_03 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr5P01230_001 MADS box 10 57

Links

Other MADS box family TFs
Other Musa acuminata TFs

148 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr6G18670_001 Musa acuminata GSMUA_Achr6G18670_001 I 0.917
cassava32003.m1 Manihot esculenta cassava32003.m1 I 0.812
Sb03g041860 Sorghum bicolor Sb03g041860 I 0.812
Cucsa.018420 Cucumis sativus Cucsa.018420 I 0.812
Cla023547 Citrullus lanatus Cla023547 I 0.812
Aquca_014_00308 Aquilegia coerulea Aquca_014_00308 I 0.812
Eucgr.E01006 Eucalyptus grandis Eucgr.E01006 I 0.812
LPERR01G34040 Leersia perrieri LPERR01G34040 I 0.792
OMERI01G36400 Oryza meridionalis OMERI01G36400 I 0.792
OMERI05G14780 Oryza meridionalis OMERI05G14780 I 0.792
ONIVA01G44390 Oryza nivara ONIVA01G44390 I 0.792
OLONG_005253 Oryza longistaminata OLONG_005253 I 0.792
OGLUM01G43760 Oryza glumaepatula OGLUM01G43760 I 0.792
OBART01G39540 Oryza barthii OBART01G39540 I 0.792
ONIVA05G17790 Oryza nivara ONIVA05G17790 I 0.792
OBART05G17040 Oryza barthii OBART05G17040 I 0.792
OB01G48280 Oryza brachyantha OB01G48280 I 0.792
OLONG_003010 Oryza longistaminata OLONG_003010 I 0.792
ORUFI05G05970 Oryza rufipogon ORUFI05G05970 I 0.792
Si002929m.g Setaria italica Si002929m.g I 0.792
Pm004718 Prunus mume Pm004718 I 0.792
Pavir.Ea03625 Panicum virgatum Pavir.Ea03625 I 0.792
Pavir.J19259 Panicum virgatum Pavir.J19259 I 0.792
PRUPE_ppa012927mg Prunus persica PRUPE_ppa012927mg I 0.792
MADS2 Oryza sativa OS01G0883100 D 0.792
ORGLA01G0334300 Oryza glaberrima ORGLA01G0334300 I 0.792
ORGLA05G0147400 Oryza glaberrima ORGLA05G0147400 I 0.792
ORUFI05G18270 Oryza rufipogon ORUFI05G18270 I 0.792
OPUNC01G38250 Oryza punctata OPUNC01G38250 I 0.792
MADS4 Oryza sativa OS05G0423400 I 0.792
BGIOSGA019900 Oryza indica BGIOSGA019900 I 0.792
GRMZM2G110153 Zea mays GRMZM2G110153 I 0.792
BGIOSGA000377 Oryza indica BGIOSGA000377 I 0.792
mgf003143m Mimulus guttatus mgf003143m I 0.771
mgf006158m Mimulus guttatus mgf006158m I 0.771
AMTR_s00089p00081270 Amborella trichopoda AMTR_s00089p00081270 I 0.771
Gorai.002G223100 Gossypium raimondii Gorai.002G223100 I 0.771
Q9AVU7_MALDO Malus domestica Q9AVU7_MALDO D 0.771
29648.m001978 Ricinus communis 29648.m001978 I 0.771
Solyc06g059970.2 Solanum lycopersicum Solyc06g059970.2 I 0.771
PI Vitis vinifera VIT_18s0001g01760 I 0.771
FBP1_PETHY Petunia x hybrida FBP1_PETHY D 0.771
OB05G24910 Oryza brachyantha OB05G24910 I 0.771
mgf008207m Mimulus guttatus mgf008207m I 0.771
POPTR_0002s07920 Populus trichocarpa POPTR_0002s07920 I 0.771
PDK_20s1380661g001 Phoenix dactylifera PDK_20s1380661g001 N 0.750
M17_MAIZE Zea mays M17_MAIZE D 0.750
GLYMA04G42420 Glycine max GLYMA04G42420 I 0.750
MADS2_PETHY Petunia x hybrida MADS2_PETHY D 0.750
Pavir.J33965 Panicum virgatum Pavir.J33965 I 0.750
TCM_035212 Theobroma cacao TCM_035212 I 0.750
Si018183m.g Setaria italica Si018183m.g I 0.750
Si023214m.g Setaria italica Si023214m.g I 0.750
GRMZM2G152862 Zea mays GRMZM2G152862 I 0.750
Solyc08g067230.2 Solanum lycopersicum Solyc08g067230.2 I 0.750
Pavir.J00016 Panicum virgatum Pavir.J00016 I 0.750
GLYMA06G12380 Glycine max GLYMA06G12380 I 0.750
PGSC0003DMG401007392 Solanum tuberosum PGSC0003DMG401007392 I 0.750
Pavir.Aa03173 Panicum virgatum Pavir.Aa03173 I 0.750
evm.TU.supercontig_26.316 Carica papaya evm.TU.supercontig_26.316 I 0.750
SapurV1A.0829s0180 Salix purpurea SapurV1A.0829s0180 I 0.750
Gorai.005G087600 Gossypium raimondii Gorai.005G087600 I 0.750
Pavir.Ab00475 Panicum virgatum Pavir.Ab00475 I 0.750
Sb04g004736 Sorghum bicolor Sb04g004736 I 0.750
POPTR_0005s20480 Populus trichocarpa POPTR_0005s20480 I 0.750
Q9AR49_MAIZE Zea mays Q9AR49_MAIZE D 0.750
gene11267-v1.0-hybrid Fragaria vesca gene11267-v1.0-hybrid I 0.750
Sb06g019040 Sorghum bicolor Sb06g019040 I 0.729
Sb09g020770 Sorghum bicolor Sb09g020770 I 0.729
cassava33721.m1 Manihot esculenta cassava33721.m1 I 0.729
Pavir.Ga01454 Panicum virgatum Pavir.Ga01454 I 0.729
Pavir.Gb01527 Panicum virgatum Pavir.Gb01527 I 0.729
gene11268-v1.0-hybrid Fragaria vesca gene11268-v1.0-hybrid I 0.729
BRADI2G57000 Brachypodium distachyon BRADI2G57000 I 0.729
Ca_03887 Cicer arietinum Ca_03887 I 0.729
BGIOSGA007056 Oryza indica BGIOSGA007056 I 0.729
GRMZM5G805387 Zea mays GRMZM5G805387 I 0.729
Si012517m.g Setaria italica Si012517m.g I 0.729
OB02G14670 Oryza brachyantha OB02G14670 I 0.729
GLYMA01G02525 Glycine max GLYMA01G02525 I 0.729
ORUFI02G05500 Oryza rufipogon ORUFI02G05500 I 0.729
OPUNC02G04560 Oryza punctata OPUNC02G04560 I 0.729
ORGLA02G0049700 Oryza glaberrima ORGLA02G0049700 I 0.729
OBART02G05380 Oryza barthii OBART02G05380 I 0.729
GRMZM2G130382 Zea mays GRMZM2G130382 I 0.729
GRMZM2G032905 Zea mays GRMZM2G032905 I 0.729
ONIVA02G05710 Oryza nivara ONIVA02G05710 I 0.729
MTR_3g088615 Medicago truncatula MTR_3g088615 I 0.729
MADS29 Oryza sativa OS02G0170300 I 0.729
GSMUA_Achr3G23580_001 Musa acuminata GSMUA_Achr3G23580_001 I 0.729
GLYMA09G33451 Glycine max GLYMA09G33451 I 0.729
GSMUA_Achr2G02660_001 Musa acuminata GSMUA_Achr2G02660_001 I 0.729
GLYMA08G06991 Glycine max GLYMA08G06991 I 0.729
OMERI02G06250 Oryza meridionalis OMERI02G06250 I 0.729
LPERR02G04610 Leersia perrieri LPERR02G04610 I 0.729
OGLUM02G05240 Oryza glumaepatula OGLUM02G05240 I 0.729
OBART04G15020 Oryza barthii OBART04G15020 I 0.708
Aquca_007_00336 Aquilegia coerulea Aquca_007_00336 I 0.708
Eucgr.E01007 Eucalyptus grandis Eucgr.E01007 I 0.708
Ciclev10009338m.g Citrus clementina Ciclev10009338m.g I 0.708
AMTR_s00066p00109320 Amborella trichopoda AMTR_s00066p00109320 I 0.708
Aquca_022_00241 Aquilegia coerulea Aquca_022_00241 I 0.708
Gorai.008G018100 Gossypium raimondii Gorai.008G018100 I 0.708
AMTR_s00001p00270400 Amborella trichopoda AMTR_s00001p00270400 I 0.708
MLOC_65966 Hordeum vulgare MLOC_65966 I 0.708
GRMZM2G316366 Zea mays GRMZM2G316366 I 0.708
SapurV1A.0168s0400 Salix purpurea SapurV1A.0168s0400 I 0.708
LjSGA_047687.2 Lotus japonicus LjSGA_047687.2 I 0.708
PK29837.1 Cannabis sativa PK29837.1 I 0.708
MTR_5g031000 Medicago truncatula MTR_5g031000 I 0.708
AMTR_s00002p00262770 Amborella trichopoda AMTR_s00002p00262770 I 0.708
GLYMA14G24590 Glycine max GLYMA14G24590 I 0.708
Gorai.007G043400 Gossypium raimondii Gorai.007G043400 I 0.708
MDP0000783966 Malus domestica MDP0000783966 I 0.708
orange1.1g024093m.g Citrus sinensis orange1.1g024093m.g I 0.708
GRMZM2G137387 Zea mays GRMZM2G137387 I 0.708
OB04G22330 Oryza brachyantha OB04G22330 I 0.708
cassava26340.m1 Manihot esculenta cassava26340.m1 I 0.708
BRADI5G21700 Brachypodium distachyon BRADI5G21700 I 0.708
BRADI5G12440 Brachypodium distachyon BRADI5G12440 I 0.708
ORUFI04G16410 Oryza rufipogon ORUFI04G16410 I 0.708
F775_27066 Aegilops tauschii F775_27066 I 0.708
Traes_2AL_267502097 Triticum aestivum Traes_2AL_267502097 I 0.708
ORGLA04G0120000 Oryza glaberrima ORGLA04G0120000 I 0.708
Bra012997 Brassica rapa Bra012997 I 0.708
SELMODRAFT_450937 Selaginella moellendorffii SELMODRAFT_450937 I 0.708
Q9FVN1_MAIZE Zea mays Q9FVN1_MAIZE D 0.708
AMTR_s00001p00217560 Amborella trichopoda AMTR_s00001p00217560 I 0.708
BRADI1G59250 Brachypodium distachyon BRADI1G59250 I 0.708
OS04G0461300 Oryza sativa OS04G0461300 I 0.708
SELMODRAFT_450818 Selaginella moellendorffii SELMODRAFT_450818 I 0.708
BRADI3G05260 Brachypodium distachyon BRADI3G05260 I 0.708
Traes_2BL_3E613DE21 Triticum aestivum Traes_2BL_3E613DE21 I 0.708
Traes_2DL_662837152 Triticum aestivum Traes_2DL_662837152 I 0.708
Bo7g098190 Brassica oleracea Bo7g098190 I 0.708
F775_30836 Aegilops tauschii F775_30836 I 0.708
ONIVA04G13150 Oryza nivara ONIVA04G13150 I 0.708
29804.m001536 Ricinus communis 29804.m001536 I 0.708
OLONG_016283 Oryza longistaminata OLONG_016283 I 0.708
POPTR_0015s11030 Populus trichocarpa POPTR_0015s11030 I 0.708
VIT_03s0097g00160 Vitis vinifera VIT_03s0097g00160 I 0.708
TT16 Vitis vinifera VIT_01s0011g01560 I 0.708
Traes_6BS_5789476CB Triticum aestivum Traes_6BS_5789476CB I 0.708
Traes_6AS_57E50EE92 Triticum aestivum Traes_6AS_57E50EE92 I 0.708
Traes_6DS_9BBDCC9F7 Triticum aestivum Traes_6DS_9BBDCC9F7 I 0.708
TRIUR3_19891 Triticum urartu TRIUR3_19891 I 0.708
TRIUR3_26896 Triticum urartu TRIUR3_26896 I 0.708
GLYMA13G09660 Glycine max GLYMA13G09660 I 0.708