CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRUPE_ppa012927mg
(
Prunus persica
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
PRUPE_ppa012927mg
T255905_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q9AVU7_MALDO
M11027_2.00
Malus domestica
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PI_01
0.938
0.938
MADS2_PETHY
M10998_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS2_01
0.917
0.917
FBP1_PETHY
M10996_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP1_01
0.854
0.854
PI
M08148_2.00
Arabidopsis thaliana
MCMAAARWRGAAAR
YTTTCYWYTTTKGK
ChIP-seq
Mathelier et al.(2014)
MA0559.1
0.771
0.771
AP3
M08146_2.00
Arabidopsis thaliana
WDCCMAAARWRGHAA
TTDCYWYTTTKGGHW
ChIP-seq
Mathelier et al.(2014)
MA0556.1
0.708
0.708
M17_MAIZE
M10959_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$M17_01
0.708
0.708
Q8VWZ4_MALDO
M11026_2.00
Malus domestica
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS13_01
0.708
0.708
MADS2
M10966_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS2_02
0.708
0.708
AP3
M10919_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADSB_Q2
0.708
0.708
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMJ24889
MADS box
10
57
RIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLVIFASSGKMVEY
Links
Other
MADS box
family TFs
Other
Prunus persica
TFs
148 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm004718
Prunus mume
Pm004718
I
1.000
Cucsa.018420
Cucumis sativus
Cucsa.018420
I
0.958
Cla023547
Citrullus lanatus
Cla023547
I
0.958
cassava32003.m1
Manihot esculenta
cassava32003.m1
I
0.958
gene11268-v1.0-hybrid
Fragaria vesca
gene11268-v1.0-hybrid
I
0.938
Q9AVU7_MALDO
Malus domestica
Q9AVU7_MALDO
D
0.938
PI
Vitis vinifera
VIT_18s0001g01760
I
0.938
29648.m001978
Ricinus communis
29648.m001978
I
0.938
Gorai.005G087600
Gossypium raimondii
Gorai.005G087600
I
0.938
TCM_035212
Theobroma cacao
TCM_035212
I
0.917
evm.TU.supercontig_26.316
Carica papaya
evm.TU.supercontig_26.316
I
0.917
cassava33721.m1
Manihot esculenta
cassava33721.m1
I
0.917
MADS2_PETHY
Petunia x hybrida
MADS2_PETHY
D
0.917
POPTR_0002s07920
Populus trichocarpa
POPTR_0002s07920
I
0.917
POPTR_0005s20480
Populus trichocarpa
POPTR_0005s20480
I
0.896
gene11267-v1.0-hybrid
Fragaria vesca
gene11267-v1.0-hybrid
I
0.896
SapurV1A.0829s0180
Salix purpurea
SapurV1A.0829s0180
I
0.896
Gorai.002G223100
Gossypium raimondii
Gorai.002G223100
I
0.896
Solyc06g059970.2
Solanum lycopersicum
Solyc06g059970.2
I
0.896
Ciclev10002471m.g
Citrus clementina
Ciclev10002471m.g
I
0.875
orange1.1g040096m.g
Citrus sinensis
orange1.1g040096m.g
I
0.875
Ca_13111
Cicer arietinum
Ca_13111
I
0.875
mgf003143m
Mimulus guttatus
mgf003143m
I
0.854
mgf006158m
Mimulus guttatus
mgf006158m
I
0.854
Ciclev10002422m.g
Citrus clementina
Ciclev10002422m.g
I
0.854
LjSGA_047687.2
Lotus japonicus
LjSGA_047687.2
I
0.854
GLYMA13G09660
Glycine max
GLYMA13G09660
I
0.854
Lus10042749.g
Linum usitatissimum
Lus10042749.g
I
0.854
Lus10029719.g
Linum usitatissimum
Lus10029719.g
I
0.854
FBP1_PETHY
Petunia x hybrida
FBP1_PETHY
D
0.854
orange1.1g042044m.g
Citrus sinensis
orange1.1g042044m.g
I
0.854
mgf008207m
Mimulus guttatus
mgf008207m
I
0.854
GLYMA14G24590
Glycine max
GLYMA14G24590
I
0.854
GLYMA06G12380
Glycine max
GLYMA06G12380
I
0.833
Solyc08g067230.2
Solanum lycopersicum
Solyc08g067230.2
I
0.833
PGSC0003DMG401007392
Solanum tuberosum
PGSC0003DMG401007392
I
0.833
GLYMA04G42420
Glycine max
GLYMA04G42420
I
0.833
Eucgr.E01006
Eucalyptus grandis
Eucgr.E01006
I
0.833
Ca_03887
Cicer arietinum
Ca_03887
I
0.812
MTR_3g088615
Medicago truncatula
MTR_3g088615
I
0.812
PI
Arabidopsis lyrata
fgenesh2_kg.6__2063__AT5G20240.1
I
0.792
MTR_1g029670
Medicago truncatula
MTR_1g029670
I
0.792
Eucgr.E01007
Eucalyptus grandis
Eucgr.E01007
I
0.792
GSMUA_Achr5G01230_001
Musa acuminata
GSMUA_Achr5G01230_001
I
0.792
AMTR_s00001p00217560
Amborella trichopoda
AMTR_s00001p00217560
I
0.771
Carubv10001962m.g
Capsella rubella
Carubv10001962m.g
I
0.771
Cagra.0179s0008
Capsella grandiflora
Cagra.0179s0008
I
0.771
GSMUA_Achr6G18670_001
Musa acuminata
GSMUA_Achr6G18670_001
I
0.771
PI
Arabidopsis thaliana
AT5G20240
D
0.771
Bostr.26527s0175
Boechera stricta
Bostr.26527s0175
I
0.771
Thhalv10014683m.g
Eutrema salsugineum
Thhalv10014683m.g
I
0.771
Bo3g010390
Brassica oleracea
Bo3g010390
I
0.771
Traes_7BL_7F4124E70
Triticum aestivum
Traes_7BL_7F4124E70
I
0.760
AP3
Vitis vinifera
VIT_18s0001g13460
I
0.750
Aquca_014_00308
Aquilegia coerulea
Aquca_014_00308
I
0.750
cassava33649.m1
Manihot esculenta
cassava33649.m1
I
0.750
orange1.1g027470m.g
Citrus sinensis
orange1.1g027470m.g
I
0.750
TCM_000266
Theobroma cacao
TCM_000266
I
0.750
Gorai.008G064900
Gossypium raimondii
Gorai.008G064900
I
0.750
VIT_04s0023g02820
Vitis vinifera
VIT_04s0023g02820
I
0.750
Bra006549
Brassica rapa
Bra006549
I
0.750
Bra020093
Brassica rapa
Bra020093
I
0.750
Bo3g014100
Brassica oleracea
Bo3g014100
I
0.750
Bo2g020730
Brassica oleracea
Bo2g020730
I
0.750
Bo9g152080
Brassica oleracea
Bo9g152080
I
0.750
Bra002285
Brassica rapa
Bra002285
I
0.750
AMTR_s00089p00081270
Amborella trichopoda
AMTR_s00089p00081270
I
0.750
Cla021117
Citrullus lanatus
Cla021117
I
0.729
cassava37821.valid.m1
Manihot esculenta
cassava37821.valid.m1
I
0.729
Ca_04909
Cicer arietinum
Ca_04909
I
0.729
Pm006266
Prunus mume
Pm006266
I
0.729
cassava21176.m1
Manihot esculenta
cassava21176.m1
I
0.729
cassava41235.m1
Manihot esculenta
cassava41235.m1
I
0.729
Cucsa.342790
Cucumis sativus
Cucsa.342790
I
0.729
Ciclev10026433m.g
Citrus clementina
Ciclev10026433m.g
I
0.729
Lus10033187.g
Linum usitatissimum
Lus10033187.g
I
0.729
MTR_3g113030
Medicago truncatula
MTR_3g113030
I
0.729
Solyc02g084630.2
Solanum lycopersicum
Solyc02g084630.2
I
0.729
chr1.CM0195.210.nc
Lotus japonicus
chr1.CM0195.210.nc
I
0.729
Sb03g041860
Sorghum bicolor
Sb03g041860
I
0.729
GLYMA06G02990
Glycine max
GLYMA06G02990
I
0.729
cassava37822.valid.m1
Manihot esculenta
cassava37822.valid.m1
I
0.729
PGSC0003DMG400003541
Solanum tuberosum
PGSC0003DMG400003541
I
0.729
Aquca_006_00072
Aquilegia coerulea
Aquca_006_00072
I
0.729
Pm026712
Prunus mume
Pm026712
I
0.723
GLYMA04G02980
Glycine max
GLYMA04G02980
I
0.708
BRADI2G57000
Brachypodium distachyon
BRADI2G57000
I
0.708
Gorai.003G011500
Gossypium raimondii
Gorai.003G011500
I
0.708
GLYMA01G37470
Glycine max
GLYMA01G37470
I
0.708
Bra012997
Brassica rapa
Bra012997
I
0.708
AP3
Arabidopsis lyrata
fgenesh2_kg.5__1825__AT3G54340.1
I
0.708
evm.TU.supercontig_6.199
Carica papaya
evm.TU.supercontig_6.199
I
0.708
Lus10010630.g
Linum usitatissimum
Lus10010630.g
I
0.708
evm.TU.supercontig_6.202
Carica papaya
evm.TU.supercontig_6.202
I
0.708
MDP0000224779
Malus domestica
MDP0000224779
I
0.708
SapurV1A.0569s0080
Salix purpurea
SapurV1A.0569s0080
I
0.708
BGIOSGA019900
Oryza indica
BGIOSGA019900
I
0.708
Q8VWZ4_MALDO
Malus domestica
Q8VWZ4_MALDO
D
0.708
BGIOSGA000377
Oryza indica
BGIOSGA000377
I
0.708
SapurV1A.2002s0050
Salix purpurea
SapurV1A.2002s0050
I
0.708
chr2.CM0249.370.nd
Lotus japonicus
chr2.CM0249.370.nd
I
0.708
AP3
Arabidopsis thaliana
AT3G54340
D
0.708
Pavir.J19259
Panicum virgatum
Pavir.J19259
I
0.708
Pavir.Ea03625
Panicum virgatum
Pavir.Ea03625
I
0.708
MDP0000184294
Malus domestica
MDP0000184294
I
0.708
MDP0000133037
Malus domestica
MDP0000133037
I
0.708
MDP0000315938
Malus domestica
MDP0000315938
I
0.708
Bo7g098190
Brassica oleracea
Bo7g098190
I
0.708
Pavir.Ab00475
Panicum virgatum
Pavir.Ab00475
I
0.708
Pavir.Aa03173
Panicum virgatum
Pavir.Aa03173
I
0.708
Lus10031960.g
Linum usitatissimum
Lus10031960.g
I
0.708
Bostr.0697s0046
Boechera stricta
Bostr.0697s0046
I
0.708
ORGLA01G0334300
Oryza glaberrima
ORGLA01G0334300
I
0.708
ORGLA05G0147400
Oryza glaberrima
ORGLA05G0147400
I
0.708
ORUFI05G05970
Oryza rufipogon
ORUFI05G05970
I
0.708
Ca_01994
Cicer arietinum
Ca_01994
I
0.708
OPUNC01G38250
Oryza punctata
OPUNC01G38250
I
0.708
OMERI05G14780
Oryza meridionalis
OMERI05G14780
I
0.708
ONIVA01G44390
Oryza nivara
ONIVA01G44390
I
0.708
ONIVA05G17790
Oryza nivara
ONIVA05G17790
I
0.708
ORUFI05G18270
Oryza rufipogon
ORUFI05G18270
I
0.708
MADS2
Oryza sativa
OS01G0883100
D
0.708
Sb04g004736
Sorghum bicolor
Sb04g004736
I
0.708
PRUPE_ppa026083mg
Prunus persica
PRUPE_ppa026083mg
I
0.708
PRUPE_ppa010727mg
Prunus persica
PRUPE_ppa010727mg
I
0.708
Si002929m.g
Setaria italica
Si002929m.g
I
0.708
Si018183m.g
Setaria italica
Si018183m.g
I
0.708
MADS4
Oryza sativa
OS05G0423400
I
0.708
POPTR_0005s12000
Populus trichocarpa
POPTR_0005s12000
I
0.708
OMERI01G36400
Oryza meridionalis
OMERI01G36400
I
0.708
OLONG_005253
Oryza longistaminata
OLONG_005253
I
0.708
GSMUA_Achr9G20950_001
Musa acuminata
GSMUA_Achr9G20950_001
I
0.708
LPERR01G34040
Leersia perrieri
LPERR01G34040
I
0.708
POPTR_0007s13660
Populus trichocarpa
POPTR_0007s13660
I
0.708
Cagra.0562s0025
Capsella grandiflora
Cagra.0562s0025
I
0.708
GSMUA_Achr9G20940_001
Musa acuminata
GSMUA_Achr9G20940_001
I
0.708
GRMZM2G110153
Zea mays
GRMZM2G110153
I
0.708
Carubv10018833m.g
Capsella rubella
Carubv10018833m.g
I
0.708
M17_MAIZE
Zea mays
M17_MAIZE
D
0.708
MTR_5g021270
Medicago truncatula
MTR_5g021270
I
0.708
OGLUM01G43760
Oryza glumaepatula
OGLUM01G43760
I
0.708
29782.m000119
Ricinus communis
29782.m000119
I
0.708
OLONG_003010
Oryza longistaminata
OLONG_003010
I
0.708
OBART05G17040
Oryza barthii
OBART05G17040
I
0.708
OBART01G39540
Oryza barthii
OBART01G39540
I
0.708
OB01G48280
Oryza brachyantha
OB01G48280
I
0.708
OB05G24910
Oryza brachyantha
OB05G24910
I
0.708
GLYMA11G07820
Glycine max
GLYMA11G07820
I
0.708