SapurV1A.0569s0080 (Salix purpurea)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 SapurV1A.0569s0080 T259043_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q8VWZ4_MALDO
M11026_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS13_01 		0.896 0.896
AP3
M08146_2.00 		Arabidopsis thaliana
WDCCMAAARWRGHAA
TTDCYWYTTTKGGHW		 ChIP-seq
Mathelier et al.(2014)
MA0556.1 		0.812 0.812
AP3
M10919_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADSB_Q2 		0.812 0.812
Q40513_TOBAC
M11001_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DEF_01 		0.792 0.792
MADS2_PETHY
M10998_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS2_01 		0.750 0.750
MADS16
M10971_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS16_01 		0.729 0.729
Q9AVU7_MALDO
M11027_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PI_01 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0569s0080.1.p MADS box 10 57

Links

Other MADS box family TFs
Other Salix purpurea TFs

149 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0007s13660 Populus trichocarpa POPTR_0007s13660 I 1.000
SapurV1A.2002s0050 Salix purpurea SapurV1A.2002s0050 I 0.979
POPTR_0005s12000 Populus trichocarpa POPTR_0005s12000 I 0.958
SapurV1A.0396s0210 Salix purpurea SapurV1A.0396s0210 I 0.938
VIT_04s0023g02820 Vitis vinifera VIT_04s0023g02820 I 0.917
orange1.1g027470m.g Citrus sinensis orange1.1g027470m.g I 0.917
MDP0000184294 Malus domestica MDP0000184294 I 0.896
Q8VWZ4_MALDO Malus domestica Q8VWZ4_MALDO D 0.896
evm.TU.supercontig_6.199 Carica papaya evm.TU.supercontig_6.199 I 0.896
MDP0000315938 Malus domestica MDP0000315938 I 0.896
evm.TU.supercontig_6.202 Carica papaya evm.TU.supercontig_6.202 I 0.896
Ciclev10026433m.g Citrus clementina Ciclev10026433m.g I 0.896
cassava33649.m1 Manihot esculenta cassava33649.m1 I 0.875
MDP0000133037 Malus domestica MDP0000133037 I 0.875
MDP0000224779 Malus domestica MDP0000224779 I 0.875
29782.m000119 Ricinus communis 29782.m000119 I 0.875
cassava21176.m1 Manihot esculenta cassava21176.m1 I 0.875
Pm026712 Prunus mume Pm026712 I 0.872
Cla021117 Citrullus lanatus Cla021117 I 0.854
Gorai.003G011500 Gossypium raimondii Gorai.003G011500 I 0.854
PRUPE_ppa010727mg Prunus persica PRUPE_ppa010727mg I 0.854
Ca_01994 Cicer arietinum Ca_01994 I 0.854
TCM_000266 Theobroma cacao TCM_000266 I 0.854
Cucsa.342790 Cucumis sativus Cucsa.342790 I 0.854
MTR_5g021270 Medicago truncatula MTR_5g021270 I 0.854
Gorai.008G064900 Gossypium raimondii Gorai.008G064900 I 0.854
chr2.CM0249.370.nd Lotus japonicus chr2.CM0249.370.nd I 0.854
GLYMA01G37470 Glycine max GLYMA01G37470 I 0.854
GLYMA11G07820 Glycine max GLYMA11G07820 I 0.854
PGSC0003DMG400003541 Solanum tuberosum PGSC0003DMG400003541 I 0.833
Solyc02g084630.2 Solanum lycopersicum Solyc02g084630.2 I 0.833
AP3 Vitis vinifera VIT_18s0001g13460 I 0.833
gene14896-v1.0-hybrid Fragaria vesca gene14896-v1.0-hybrid I 0.833
GLYMA06G02990 Glycine max GLYMA06G02990 I 0.833
chr1.CM0195.210.nc Lotus japonicus chr1.CM0195.210.nc I 0.833
MTR_3g113030 Medicago truncatula MTR_3g113030 I 0.833
Ca_04909 Cicer arietinum Ca_04909 I 0.833
Lus10031960.g Linum usitatissimum Lus10031960.g I 0.812
AP3 Arabidopsis lyrata fgenesh2_kg.5__1825__AT3G54340.1 I 0.812
AMTR_s00066p00109320 Amborella trichopoda AMTR_s00066p00109320 I 0.812
AP3 Arabidopsis thaliana AT3G54340 D 0.812
Eucgr.F01615 Eucalyptus grandis Eucgr.F01615 I 0.812
GLYMA04G02980 Glycine max GLYMA04G02980 I 0.812
Lus10033187.g Linum usitatissimum Lus10033187.g I 0.812
AMTR_s00001p00217560 Amborella trichopoda AMTR_s00001p00217560 I 0.812
Bostr.0697s0046 Boechera stricta Bostr.0697s0046 I 0.812
Cagra.0562s0025 Capsella grandiflora Cagra.0562s0025 I 0.812
Carubv10018833m.g Capsella rubella Carubv10018833m.g I 0.812
Lus10010630.g Linum usitatissimum Lus10010630.g I 0.812
GSMUA_Achr9G20950_001 Musa acuminata GSMUA_Achr9G20950_001 I 0.812
GSMUA_Achr9G20940_001 Musa acuminata GSMUA_Achr9G20940_001 I 0.812
Bra007067 Brassica rapa Bra007067 I 0.792
mgf015533m Mimulus guttatus mgf015533m I 0.792
Bra014822 Brassica rapa Bra014822 I 0.792
Bo8g083600 Brassica oleracea Bo8g083600 I 0.792
Bo4g120010 Brassica oleracea Bo4g120010 I 0.792
Q40513_TOBAC Nicotiana tabacum Q40513_TOBAC D 0.792
Ciclev10002410m.g Citrus clementina Ciclev10002410m.g I 0.792
Gorai.009G271100 Gossypium raimondii Gorai.009G271100 I 0.792
PRUPE_ppa026083mg Prunus persica PRUPE_ppa026083mg I 0.792
Thhalv10010683m.g Eutrema salsugineum Thhalv10010683m.g I 0.792
Eucgr.I02376 Eucalyptus grandis Eucgr.I02376 I 0.792
PGSC0003DMG400003709 Solanum tuberosum PGSC0003DMG400003709 I 0.792
cassava41235.m1 Manihot esculenta cassava41235.m1 I 0.792
Solyc04g081000.2 Solanum lycopersicum Solyc04g081000.2 I 0.792
cassava37822.valid.m1 Manihot esculenta cassava37822.valid.m1 I 0.792
orange1.1g040046m.g Citrus sinensis orange1.1g040046m.g I 0.792
cassava37821.valid.m1 Manihot esculenta cassava37821.valid.m1 I 0.792
GRMZM2G137289 Zea mays GRMZM2G137289 I 0.792
Aquca_007_00336 Aquilegia coerulea Aquca_007_00336 I 0.771
Pm006266 Prunus mume Pm006266 I 0.771
AP3 Populus trichocarpa POPTR_0002s02990 I 0.771
TCM_034148 Theobroma cacao TCM_034148 I 0.771
mgf000046m Mimulus guttatus mgf000046m I 0.766
Traes_7BL_7F4124E70 Triticum aestivum Traes_7BL_7F4124E70 I 0.760
Aquca_006_00074 Aquilegia coerulea Aquca_006_00074 I 0.750
Aquca_006_00072 Aquilegia coerulea Aquca_006_00072 I 0.750
estExt_gwp_gw1.C_900087 Physcomitrella patens estExt_gwp_gw1.C_900087 I 0.750
estExt_gwp_gw1.C_1630046 Physcomitrella patens estExt_gwp_gw1.C_1630046 I 0.750
MADS2_PETHY Petunia x hybrida MADS2_PETHY D 0.750
GRMZM2G139073 Zea mays GRMZM2G139073 I 0.729
fgenesh1_pg.scaffold_163000049 Physcomitrella patens fgenesh1_pg.scaffold_163000049 I 0.729
ONIVA06G29820 Oryza nivara ONIVA06G29820 I 0.729
OMERI06G27290 Oryza meridionalis OMERI06G27290 I 0.729
OLONG_004226 Oryza longistaminata OLONG_004226 I 0.729
Q9AVU7_MALDO Malus domestica Q9AVU7_MALDO D 0.729
SapurV1A.0025s0830 Salix purpurea SapurV1A.0025s0830 I 0.729
MLOC_31575 Hordeum vulgare MLOC_31575 I 0.729
OB06G35020 Oryza brachyantha OB06G35020 I 0.729
OBART06G27230 Oryza barthii OBART06G27230 I 0.729
OGLUM06G28660 Oryza glumaepatula OGLUM06G28660 I 0.729
Ciclev10026457m.g Citrus clementina Ciclev10026457m.g I 0.729
estExt_fgenesh1_pm.C_80015 Physcomitrella patens estExt_fgenesh1_pm.C_80015 I 0.729
estExt_fgenesh1_pg.C_1180093 Physcomitrella patens estExt_fgenesh1_pg.C_1180093 I 0.729
cassava33721.m1 Manihot esculenta cassava33721.m1 I 0.729
Traes_7AL_1C76E543C Triticum aestivum Traes_7AL_1C76E543C I 0.729
orange1.1g034384m.g Citrus sinensis orange1.1g034384m.g I 0.729
BRADI1G35000 Brachypodium distachyon BRADI1G35000 I 0.729
Traes_7DL_DDCC09B24 Triticum aestivum Traes_7DL_DDCC09B24 I 0.729
cassava1567.valid.m1 Manihot esculenta cassava1567.valid.m1 I 0.729
BGIOSGA020546 Oryza indica BGIOSGA020546 I 0.729
TRIUR3_29719 Triticum urartu TRIUR3_29719 I 0.729
Pavir.Db00185 Panicum virgatum Pavir.Db00185 I 0.729
Si007221m.g Setaria italica Si007221m.g I 0.729
e_gw1.55.5.1 Physcomitrella patens e_gw1.55.5.1 I 0.729
ORGLA06G0229200 Oryza glaberrima ORGLA06G0229200 I 0.729
Gorai.005G087600 Gossypium raimondii Gorai.005G087600 I 0.729
ORUFI06G29170 Oryza rufipogon ORUFI06G29170 I 0.729
MADS16 Oryza sativa OS06G0712700 D 0.729
Sb10g029810 Sorghum bicolor Sb10g029810 I 0.729
Pavir.J11672 Panicum virgatum Pavir.J11672 I 0.729
LPERR06G22780 Leersia perrieri LPERR06G22780 I 0.729
OPUNC06G24880 Oryza punctata OPUNC06G24880 I 0.717
orange1.1g024093m.g Citrus sinensis orange1.1g024093m.g I 0.708
evm.TU.supercontig_55.31 Carica papaya evm.TU.supercontig_55.31 I 0.708
Gorai.002G223100 Gossypium raimondii Gorai.002G223100 I 0.708
gene11267-v1.0-hybrid Fragaria vesca gene11267-v1.0-hybrid I 0.708
29648.m001978 Ricinus communis 29648.m001978 I 0.708
Solyc06g059970.2 Solanum lycopersicum Solyc06g059970.2 I 0.708
PRUPE_ppa012927mg Prunus persica PRUPE_ppa012927mg I 0.708
TCM_034501 Theobroma cacao TCM_034501 I 0.708
TCM_035212 Theobroma cacao TCM_035212 I 0.708
Cla014322 Citrullus lanatus Cla014322 I 0.708
TT16 Vitis vinifera VIT_01s0011g01560 I 0.708
PRUPE_ppa011063mg Prunus persica PRUPE_ppa011063mg I 0.708
MTR_5g032520 Medicago truncatula MTR_5g032520 I 0.708
Bo7g109590 Brassica oleracea Bo7g109590 I 0.708
AGL24 Arabidopsis thaliana AT4G24540 I 0.708
Bra019221 Brassica rapa Bra019221 I 0.708
AGL24 Arabidopsis lyrata fgenesh2_kg.7__1822__AT4G24540.1 I 0.708
MTR_5g032150 Medicago truncatula MTR_5g032150 I 0.708
GLYMA01G02880 Glycine max GLYMA01G02880 I 0.708
Pm002166 Prunus mume Pm002166 I 0.708
Pm004718 Prunus mume Pm004718 I 0.708
mgf025830m Mimulus guttatus mgf025830m I 0.708
estExt_Genewise1.C_80073 Physcomitrella patens estExt_Genewise1.C_80073 I 0.708
Aquca_009_00337 Aquilegia coerulea Aquca_009_00337 I 0.708
Aquca_032_00047 Aquilegia coerulea Aquca_032_00047 I 0.708
evm.TU.supercontig_21.11 Carica papaya evm.TU.supercontig_21.11 I 0.708
Ciclev10009338m.g Citrus clementina Ciclev10009338m.g I 0.708
estExt_fgenesh1_kg.C_550007 Physcomitrella patens estExt_fgenesh1_kg.C_550007 I 0.708
estExt_fgenesh1_kg.C_260002 Physcomitrella patens estExt_fgenesh1_kg.C_260002 I 0.708
cassava31071.valid.m1 Manihot esculenta cassava31071.valid.m1 I 0.708
cassava31070.valid.m1 Manihot esculenta cassava31070.valid.m1 I 0.708
cassava42879.valid.m1 Manihot esculenta cassava42879.valid.m1 I 0.708
Cucsa.104010 Cucumis sativus Cucsa.104010 I 0.708
e_gw1.209.37.1 Physcomitrella patens e_gw1.209.37.1 I 0.708
e_gw1.171.4.1 Physcomitrella patens e_gw1.171.4.1 I 0.708
evm.TU.supercontig_26.316 Carica papaya evm.TU.supercontig_26.316 I 0.708