orange1.1g037234m.g (Citrus sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 orange1.1g037234m.g T143276_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g037234m C2H2 ZF 6 25
orange1.1g037234m C2H2 ZF 24 53

Links

Other C2H2 ZF family TFs
Other Citrus sinensis TFs

196 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27810.m000651 Ricinus communis 27810.m000651 N 0.763
29908.m006047 Ricinus communis 29908.m006047 N 0.779
30055.m001542 Ricinus communis 30055.m001542 N 0.773
30061.m000294 Ricinus communis 30061.m000294 N 0.799
AMTR_s00022p00243980 Amborella trichopoda AMTR_s00022p00243980 N 0.763
AMTR_s00093p00164790 Amborella trichopoda AMTR_s00093p00164790 N 0.000
Aquca_004_00109 Aquilegia coerulea Aquca_004_00109 N 0.773
Aquca_006_00227 Aquilegia coerulea Aquca_006_00227 N 0.773
Aquca_040_00077 Aquilegia coerulea Aquca_040_00077 N 0.773
WIP2 Arabidopsis thaliana AT3G57670 N 0.763
BGIOSGA000452 Oryza indica BGIOSGA000452 N 0.000
BGIOSGA030081 Oryza indica BGIOSGA030081 N 0.000
BGIOSGA030484 Oryza indica BGIOSGA030484 N 0.000
BGIOSGA031001 Oryza indica BGIOSGA031001 N 0.783
Bo4g111000 Brassica oleracea Bo4g111000 N 0.763
Bo5g008880 Brassica oleracea Bo5g008880 N 0.764
Bo6g073120 Brassica oleracea Bo6g073120 N 0.763
Bo8g092070 Brassica oleracea Bo8g092070 N 0.763
Bo8g112550 Brassica oleracea Bo8g112550 N 0.764
Bostr.1040s0072 Boechera stricta Bostr.1040s0072 N 0.779
Bostr.20903s0019 Boechera stricta Bostr.20903s0019 N 0.763
Bra003295 Brassica rapa Bra003295 N 0.763
Bra007346 Brassica rapa Bra007346 N 0.761
Bra014612 Brassica rapa Bra014612 N 0.763
Bra018638 Brassica rapa Bra018638 N 0.764
Bra031621 Brassica rapa Bra031621 N 0.764
BRADI2G23870 Brachypodium distachyon BRADI2G23870 N 0.000
BRADI2G55540 Brachypodium distachyon BRADI2G55540 N 0.000
BRADI3G39820 Brachypodium distachyon BRADI3G39820 N 0.783
BRADI4G27770 Brachypodium distachyon BRADI4G27770 N 0.000
BRADI4G33557 Brachypodium distachyon BRADI4G33557 N 0.777
Cagra.0210s0004 Capsella grandiflora Cagra.0210s0004 N 0.763
Cagra.0764s0003 Capsella grandiflora Cagra.0764s0003 N 0.779
Carubv10012266m.g Capsella rubella Carubv10012266m.g N 0.773
Carubv10017428m.g Capsella rubella Carubv10017428m.g N 0.763
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N 0.773
cassava16214.m1 Manihot esculenta cassava16214.m1 N 0.773
cassava35956.valid.m1 Manihot esculenta cassava35956.valid.m1 N 0.763
cassava39829.m1 Manihot esculenta cassava39829.m1 N 0.792
cassava41737.m1 Manihot esculenta cassava41737.m1 N 0.763
cassava44390.m1 Manihot esculenta cassava44390.m1 N 0.779
Ca_07051 Cicer arietinum Ca_07051 N 0.773
Ca_07269 Cicer arietinum Ca_07269 N 0.763
Ca_16482 Cicer arietinum Ca_16482 N 0.768
Ca_27078 Cicer arietinum Ca_27078 N 0.779
chr1.CM0318.720.nd Lotus japonicus chr1.CM0318.720.nd N 0.763
chr3.CM1144.10.nc Lotus japonicus chr3.CM1144.10.nc N 0.767
Ciclev10003648m.g Citrus clementina Ciclev10003648m.g N 0.785
Ciclev10005189m.g Citrus clementina Ciclev10005189m.g N 0.763
Ciclev10017716m.g Citrus clementina Ciclev10017716m.g N 0.763
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N 0.773
Cla000184 Citrullus lanatus Cla000184 N 0.760
Cla008187 Citrullus lanatus Cla008187 N 0.763
Cla008675 Citrullus lanatus Cla008675 N 0.763
Cla015481 Citrullus lanatus Cla015481 N 0.792
Cucsa.050260 Cucumis sativus Cucsa.050260 N 0.792
Cucsa.065460 Cucumis sativus Cucsa.065460 N 0.792
Cucsa.199850 Cucumis sativus Cucsa.199850 N 0.760
Cucsa.242970 Cucumis sativus Cucsa.242970 N 0.763
Cucsa.357260 Cucumis sativus Cucsa.357260 N 0.763
Eucgr.A02400 Eucalyptus grandis Eucgr.A02400 N 0.763
Eucgr.B03047 Eucalyptus grandis Eucgr.B03047 N 0.000
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N 0.773
Eucgr.F00336 Eucalyptus grandis Eucgr.F00336 N 0.776
Eucgr.J00788 Eucalyptus grandis Eucgr.J00788 N 0.000
Eucgr.J01266 Eucalyptus grandis Eucgr.J01266 N 0.769
evm.TU.contig_31438 Carica papaya evm.TU.contig_31438 N 0.783
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N 0.773
evm.TU.supercontig_84.74 Carica papaya evm.TU.supercontig_84.74 N 0.763
F775_11193 Aegilops tauschii F775_11193 N 0.000
F775_14972 Aegilops tauschii F775_14972 N 0.777
TT1 Arabidopsis lyrata fgenesh2_kg.1__3606__AT1G34790.1 N 0.779
NTT Arabidopsis lyrata fgenesh2_kg.5__2209__AT3G57670.1 N 0.763
gene14361-v1.0-hybrid Fragaria vesca gene14361-v1.0-hybrid N 0.763
gene20598-v1.0-hybrid Fragaria vesca gene20598-v1.0-hybrid N 0.763
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N 0.773
GLYMA02G31270 Glycine max GLYMA02G31270 N 0.763
GLYMA08G16390 Glycine max GLYMA08G16390 N 0.792
GLYMA11G19060 Glycine max GLYMA11G19060 N 0.773
GLYMA12G09400 Glycine max GLYMA12G09400 N 0.773
GLYMA12G30930 Glycine max GLYMA12G30930 N 0.773
GLYMA12G36660 Glycine max GLYMA12G36660 N 0.792
GLYMA13G01720 Glycine max GLYMA13G01720 N 0.779
GLYMA13G27371 Glycine max GLYMA13G27371 N 0.792
GLYMA13G39370 Glycine max GLYMA13G39370 N 0.773
GLYMA14G35140 Glycine max GLYMA14G35140 N 0.779
GLYMA15G42870 Glycine max GLYMA15G42870 N 0.792
GLYMA19G32430 Glycine max GLYMA19G32430 N 0.763
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N 0.773
Gorai.002G152600 Gossypium raimondii Gorai.002G152600 N 0.763
Gorai.003G089200 Gossypium raimondii Gorai.003G089200 N 0.763
Gorai.004G037000 Gossypium raimondii Gorai.004G037000 N 0.792
Gorai.004G065400 Gossypium raimondii Gorai.004G065400 N 0.792
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N 0.773
Gorai.006G138700 Gossypium raimondii Gorai.006G138700 N 0.763
Gorai.007G177300 Gossypium raimondii Gorai.007G177300 N 0.792
Gorai.010G039600 Gossypium raimondii Gorai.010G039600 N 0.785
Gorai.013G250800 Gossypium raimondii Gorai.013G250800 N 0.000
GRMZM2G000836 Zea mays GRMZM2G000836 N 0.000
GRMZM2G071101 Zea mays GRMZM2G071101 N 0.783
GRMZM2G084014 Zea mays GRMZM2G084014 N 0.777
GRMZM2G150011 Zea mays GRMZM2G150011 N 0.000
GRMZM2G445684 Zea mays GRMZM2G445684 N 0.783
GSMUA_Achr3G03850_001 Musa acuminata GSMUA_Achr3G03850_001 N 0.792
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N 0.783
GSMUA_Achr6G01410_001 Musa acuminata GSMUA_Achr6G01410_001 N 0.000
GSMUA_Achr9G12600_001 Musa acuminata GSMUA_Achr9G12600_001 N 0.799
GSMUA_AchrUn_randomG20320_001 Musa acuminata GSMUA_AchrUn_randomG20320_001 N 0.763
GSMUA_AchrUn_randomG22660_001 Musa acuminata GSMUA_AchrUn_randomG22660_001 N 0.763
LjSGA_032817.1 Lotus japonicus LjSGA_032817.1 N 0.785
LPERR01G32600 Leersia perrieri LPERR01G32600 N 0.000
LPERR08G16620 Leersia perrieri LPERR08G16620 N 0.783
LPERR09G03450 Leersia perrieri LPERR09G03450 N 0.000
LPERR09G10700 Leersia perrieri LPERR09G10700 N 0.783
Lus10004887.g Linum usitatissimum Lus10004887.g N 0.773
Lus10020597.g Linum usitatissimum Lus10020597.g N 0.773
Lus10029525.g Linum usitatissimum Lus10029525.g N 0.783
Lus10033454.g Linum usitatissimum Lus10033454.g N 0.785
Lus10039613.g Linum usitatissimum Lus10039613.g N 0.783
MDP0000131949 Malus domestica MDP0000131949 N 0.773
MDP0000142494 Malus domestica MDP0000142494 N 0.780
MDP0000144266 Malus domestica MDP0000144266 N 0.781
MDP0000300013 Malus domestica MDP0000300013 N 0.773
MDP0000403797 Malus domestica MDP0000403797 N 0.763
MDP0000573922 Malus domestica MDP0000573922 N 0.783
MDP0000580545 Malus domestica MDP0000580545 N 0.763
MDP0000601705 Malus domestica MDP0000601705 N 0.763
mgf019910m Mimulus guttatus mgf019910m N 0.763
mgf022319m Mimulus guttatus mgf022319m N 0.799
mgf022981m Mimulus guttatus mgf022981m N 0.766
MLOC_2787 Hordeum vulgare MLOC_2787 N 0.777
MLOC_54308 Hordeum vulgare MLOC_54308 N 0.000
OB05G26090 Oryza brachyantha OB05G26090 N 0.000
OB08G26650 Oryza brachyantha OB08G26650 N 0.783
OBART01G37960 Oryza barthii OBART01G37960 N 0.000
OBART02G07320 Oryza barthii OBART02G07320 N 0.000
OBART08G19670 Oryza barthii OBART08G19670 N 0.783
OBART09G03640 Oryza barthii OBART09G03640 N 0.000
OGLUM01G42130 Oryza glumaepatula OGLUM01G42130 N 0.000
OGLUM05G19360 Oryza glumaepatula OGLUM05G19360 N 0.000
OGLUM08G20830 Oryza glumaepatula OGLUM08G20830 N 0.783
OGLUM09G04400 Oryza glumaepatula OGLUM09G04400 N 0.000
OGLUM09G05550 Oryza glumaepatula OGLUM09G05550 N 0.000
OGLUM09G15150 Oryza glumaepatula OGLUM09G15150 N 0.783
OMERI01G34920 Oryza meridionalis OMERI01G34920 N 0.000
OMERI08G16450 Oryza meridionalis OMERI08G16450 N 0.783
OMERI09G02890 Oryza meridionalis OMERI09G02890 N 0.000
OMERI09G03940 Oryza meridionalis OMERI09G03940 N 0.000
OMERI09G11270 Oryza meridionalis OMERI09G11270 N 0.783
ONIVA02G14580 Oryza nivara ONIVA02G14580 N 0.000
ONIVA04G25710 Oryza nivara ONIVA04G25710 N 0.000
ONIVA08G08420 Oryza nivara ONIVA08G08420 N 0.000
ONIVA08G21960 Oryza nivara ONIVA08G21960 N 0.783
ONIVA09G15100 Oryza nivara ONIVA09G15100 N 0.783
OPUNC01G36780 Oryza punctata OPUNC01G36780 N 0.000
OPUNC08G17810 Oryza punctata OPUNC08G17810 N 0.783
OPUNC09G03280 Oryza punctata OPUNC09G03280 N 0.000
OPUNC09G04260 Oryza punctata OPUNC09G04260 N 0.000
OPUNC09G12930 Oryza punctata OPUNC09G12930 N 0.783
orange1.1g019587m.g Citrus sinensis orange1.1g019587m.g N 0.763
orange1.1g037179m.g Citrus sinensis orange1.1g037179m.g N 0.785
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N 0.773
orange1.1g040794m.g Citrus sinensis orange1.1g040794m.g N 0.763
ORGLA01G0317700 Oryza glaberrima ORGLA01G0317700 N 0.000
ORGLA02G0068500 Oryza glaberrima ORGLA02G0068500 N 0.000
ORGLA08G0173000 Oryza glaberrima ORGLA08G0173000 N 0.783
ORGLA09G0111700 Oryza glaberrima ORGLA09G0111700 N 0.783
ORGLA09G0176200 Oryza glaberrima ORGLA09G0176200 N 0.000
ORUFI01G41290 Oryza rufipogon ORUFI01G41290 N 0.000
ORUFI09G04060 Oryza rufipogon ORUFI09G04060 N 0.000
ORUFI09G05390 Oryza rufipogon ORUFI09G05390 N 0.000
ORUFI09G15680 Oryza rufipogon ORUFI09G15680 N 0.783
OS01G0859100 Oryza sativa OS01G0859100 N 0.000
OS08G0504000 Oryza sativa OS08G0504000 N 0.783
OS09G0307400 Oryza sativa OS09G0307400 N 0.000
OS09G0485600 Oryza sativa OS09G0485600 N 0.783
Pavir.Ba01731 Panicum virgatum Pavir.Ba01731 N 0.777
Pavir.Ba03009 Panicum virgatum Pavir.Ba03009 N 0.000
Pavir.Fa00506 Panicum virgatum Pavir.Fa00506 N 0.783
Pavir.Fb01879 Panicum virgatum Pavir.Fb01879 N 0.783
Pavir.J11927 Panicum virgatum Pavir.J11927 N 0.000
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N 0.783
PGSC0003DMG400007112 Solanum tuberosum PGSC0003DMG400007112 N 0.773
PGSC0003DMG400013609 Solanum tuberosum PGSC0003DMG400013609 N 0.763
PGSC0003DMG400030271 Solanum tuberosum PGSC0003DMG400030271 N 0.763
PGSC0003DMG400030803 Solanum tuberosum PGSC0003DMG400030803 N 0.766
PGSC0003DMG400046144 Solanum tuberosum PGSC0003DMG400046144 N 0.763
PK03705.1 Cannabis sativa PK03705.1 N 0.763
PK05257.1 Cannabis sativa PK05257.1 N 0.767
Pm000471 Prunus mume Pm000471 N 0.763
Pm001374 Prunus mume Pm001374 N 0.773
Pm025853 Prunus mume Pm025853 N 0.763
POPTR_0001s05630 Populus trichocarpa POPTR_0001s05630 N 0.763
POPTR_0001s27490 Populus trichocarpa POPTR_0001s27490 N 0.792
POPTR_0002s09840 Populus trichocarpa POPTR_0002s09840 N 0.776
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N 0.773
POPTR_0009s06700 Populus trichocarpa POPTR_0009s06700 N 0.792
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N 0.773
POPTR_0016s05310 Populus trichocarpa POPTR_0016s05310 N 0.763
PRUPE_ppa008185mg Prunus persica PRUPE_ppa008185mg N 0.763
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N 0.773
PRUPE_ppa024429mg Prunus persica PRUPE_ppa024429mg N 0.763
SapurV1A.0018s0090 Salix purpurea SapurV1A.0018s0090 N 0.763
SapurV1A.0027s0280 Salix purpurea SapurV1A.0027s0280 N 0.773
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N 0.773
SapurV1A.0111s0170 Salix purpurea SapurV1A.0111s0170 N 0.763
SapurV1A.0219s0040 Salix purpurea SapurV1A.0219s0040 N 0.773
SapurV1A.0445s0120 Salix purpurea SapurV1A.0445s0120 N 0.758
SapurV1A.0445s0140 Salix purpurea SapurV1A.0445s0140 N 0.758
SapurV1A.2210s0020 Salix purpurea SapurV1A.2210s0020 N 0.763
Sb02g020840 Sorghum bicolor Sb02g020840 N 0.000
Sb02g028220 Sorghum bicolor Sb02g028220 N 0.777
Sb07g028010 Sorghum bicolor Sb07g028010 N 0.783
Sb09g021850 Sorghum bicolor Sb09g021850 N 0.000
SELMODRAFT_110681 Selaginella moellendorffii SELMODRAFT_110681 N 0.000
SELMODRAFT_128378 Selaginella moellendorffii SELMODRAFT_128378 N 0.000
SELMODRAFT_36986 Selaginella moellendorffii SELMODRAFT_36986 N 0.000
SELMODRAFT_36987 Selaginella moellendorffii SELMODRAFT_36987 N 0.000
Si013819m.g Setaria italica Si013819m.g N 0.783
Si022296m.g Setaria italica Si022296m.g N 0.000
Si029897m.g Setaria italica Si029897m.g N 0.777
Si030360m.g Setaria italica Si030360m.g N 0.000
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N 0.783
Solyc04g074320.1 Solanum lycopersicum Solyc04g074320.1 N 0.766
Solyc05g009770.1 Solanum lycopersicum Solyc05g009770.1 N 0.763
Solyc11g062060.1 Solanum lycopersicum Solyc11g062060.1 N 0.763
TCM_005892 Theobroma cacao TCM_005892 N 0.792
TCM_024788 Theobroma cacao TCM_024788 N 0.763
TCM_034881 Theobroma cacao TCM_034881 N 0.785
TCM_041441 Theobroma cacao TCM_041441 N 0.773
Thhalv10006035m.g Eutrema salsugineum Thhalv10006035m.g N 0.763
TRAES3BF099700020CFD_g Triticum aestivum TRAES3BF099700020CFD_g N 0.000
Traes_5BL_46BDE583B Triticum aestivum Traes_5BL_46BDE583B N 0.000
Traes_5BL_6888AE9CB Triticum aestivum Traes_5BL_6888AE9CB N 0.777
Traes_5DL_51643AC9F Triticum aestivum Traes_5DL_51643AC9F N 0.777
Traes_5DL_98FA0887C Triticum aestivum Traes_5DL_98FA0887C N 0.000
Traes_7AS_8054DC45D Triticum aestivum Traes_7AS_8054DC45D N 0.777
TRIUR3_30490 Triticum urartu TRIUR3_30490 N 0.777
TRIUR3_30537 Triticum urartu TRIUR3_30537 N 0.000
WIP3 Vitis vinifera VIT_06s0080g00270 N 0.773
NTT Vitis vinifera VIT_08s0007g08070 N 0.763
TT1 Vitis vinifera VIT_18s0001g05860 N 0.779